Magnesium in PDB 8a8j: Complex of Recf and Dna From Thermus Thermophilus.

The binding sites of Magnesium atom in the Complex of Recf and Dna From Thermus Thermophilus. (pdb code 8a8j). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Complex of Recf and Dna From Thermus Thermophilus., PDB code: 8a8j:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Complex of Recf and Dna From Thermus Thermophilus.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Complex of Recf and Dna From Thermus Thermophilus. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg902 b:19.3 occ:1.00 O2G A:ANP901 2.0 23.1 1.0 OG1 A:THR37 2.2 22.6 1.0 O1B A:ANP901 2.4 23.1 1.0 CB A:THR37 3.4 22.6 1.0 PG A:ANP901 3.6 23.1 1.0 PB A:ANP901 3.8 23.1 1.0 O2A A:ANP901 3.9 23.1 1.0 CG2 A:THR37 4.1 22.6 1.0 OD2 A:ASP293 4.2 24.7 1.0 N3B A:ANP901 4.4 23.1 1.0 O3G A:ANP901 4.4 23.1 1.0 O1G A:ANP901 4.4 23.1 1.0 CA A:THR37 4.6 22.6 1.0 O2B A:ANP901 4.6 23.1 1.0 N A:THR37 4.6 22.6 1.0 N B:ARG262 4.7 23.1 1.0 CB B:ARG262 4.7 23.1 1.0 OE1 A:GLU294 4.8 27.6 1.0 OE2 A:GLU294 4.9 27.6 1.0 CB B:SER261 4.9 22.2 1.0 O3A A:ANP901 4.9 23.1 1.0 PA A:ANP901 4.9 23.1 1.0

Magnesium binding site 2 out of 2 in the Complex of Recf and Dna From Thermus Thermophilus.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Complex of Recf and Dna From Thermus Thermophilus. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg902 b:20.3 occ:1.00 OG1 B:THR37 2.0 23.3 1.0 O2G B:ANP901 2.0 25.9 1.0 O1B B:ANP901 2.2 25.9 1.0 CB B:THR37 3.1 23.3 1.0 PG B:ANP901 3.5 25.9 1.0 O2A B:ANP901 3.6 25.9 1.0 PB B:ANP901 3.6 25.9 1.0 CG2 B:THR37 3.7 23.3 1.0 O3G B:ANP901 4.2 25.9 1.0 OD2 B:ASP293 4.2 25.7 1.0 N3B B:ANP901 4.2 25.9 1.0 CA B:THR37 4.4 23.3 1.0 O2B B:ANP901 4.4 25.9 1.0 O1G B:ANP901 4.5 25.9 1.0 PA B:ANP901 4.6 25.9 1.0 N B:THR37 4.6 23.3 1.0 O3A B:ANP901 4.6 25.9 1.0 N A:ARG262 4.6 23.3 1.0 CB A:SER261 4.7 21.8 1.0 CB A:ARG262 4.8 23.3 1.0 O1A B:ANP901 4.9 25.9 1.0

S.Nirwal, M.Czarnocki-Cieciura, A.Chaudhary, W.Zajko, K.Skowronek, S.Chamera, M.Figiel, M.Nowotny. Mechanism of Recf-Reco-Recr Cooperation in Bacterial Homologous Recombination Nat.Struct.Mol.Biol. 2023.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-023-00967-Z