Magnesium in PDB 8age: Structure of Yeast Oligosaccharylransferase Complex with Acceptor Peptide Bound

All present enzymatic activity of Structure of Yeast Oligosaccharylransferase Complex with Acceptor Peptide Bound:
2.4.99.18;

The binding sites of Magnesium atom in the Structure of Yeast Oligosaccharylransferase Complex with Acceptor Peptide Bound (pdb code 8age). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Yeast Oligosaccharylransferase Complex with Acceptor Peptide Bound, PDB code: 8age:

Magnesium binding site 1 out of 1 in the Structure of Yeast Oligosaccharylransferase Complex with Acceptor Peptide Bound


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Yeast Oligosaccharylransferase Complex with Acceptor Peptide Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg804 b:36.4 occ:1.00 OD2 A:ASP166 2.2 37.3 1.0 OD2 A:ASP47 2.9 40.2 1.0 CG A:ASP166 3.0 37.3 1.0 OD1 A:ASP166 3.1 37.3 1.0 CG A:ASP47 3.8 40.2 1.0 CB A:ASP47 4.1 40.2 1.0 OE2 A:GLU168 4.3 42.0 1.0 OE1 A:GLU168 4.3 42.0 1.0 NH2 A:ARG404 4.3 46.2 1.0 CB A:ASP166 4.4 37.3 1.0 CD A:GLU168 4.7 42.0 1.0 OD1 A:ASP47 4.9 40.2 1.0 NH1 A:ARG404 5.0 46.2 1.0

A.S.Ramirez, M.De Capitani, G.Pesciullesi, J.Kowal, J.S.Bloch, R.N.Irobalieva, J.L.Reymond, M.Aebi, K.P.Locher. Molecular Basis For Glycan Recognition and Reaction Priming of Eukaryotic Oligosaccharyltransferase. Nat Commun V. 13 7296 2022.
ISSN: ESSN 2041-1723
PubMed: 36435935
DOI: 10.1038/S41467-022-35067-X