Magnesium in PDB 8arv: Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa

Enzymatic activity of Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa

All present enzymatic activity of Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa:
3.1.4.52;

Protein crystallography data

The structure of Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa, PDB code: 8arv was solved by R.Dias Teixeira, U.Jenal, S.Hiller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.25 / 1.90
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.697, 117.503, 117.824, 90, 90, 90
R / Rfree (%) 20.9 / 24.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa (pdb code 8arv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa, PDB code: 8arv:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8arv

Go back to Magnesium Binding Sites List in 8arv
Magnesium binding site 1 out of 2 in the Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg701

b:26.3
occ:1.00
OD1 A:ASN516 2.0 22.0 1.0
OD2 A:ASP578 2.0 27.2 1.0
OE1 A:GLU548 2.1 26.4 1.0
OE2 A:GLU457 2.1 25.9 1.0
CG A:ASN516 3.0 28.7 1.0
CG A:ASP578 3.0 28.8 1.0
CD A:GLU457 3.1 29.8 1.0
CD A:GLU548 3.1 27.5 1.0
ND2 A:ASN516 3.3 32.8 1.0
OD1 A:ASP578 3.4 28.9 1.0
OE1 A:GLU457 3.5 26.2 1.0
OE2 A:GLU548 3.7 30.4 1.0
NZ A:LYS599 4.1 26.8 1.0
OE2 A:GLU635 4.1 40.4 1.0
CB A:ASP578 4.1 26.6 1.0
CB A:GLU548 4.2 22.5 1.0
CG A:GLU548 4.3 20.7 1.0
CB A:ASN516 4.3 24.0 1.0
CG A:GLU457 4.3 22.4 1.0
CD A:LYS599 4.9 27.1 1.0
CD2 A:LEU459 4.9 27.6 1.0

Magnesium binding site 2 out of 2 in 8arv

Go back to Magnesium Binding Sites List in 8arv
Magnesium binding site 2 out of 2 in the Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg701

b:27.3
occ:1.00
OD1 B:ASN516 2.0 19.7 1.0
OE1 B:GLU548 2.0 26.0 1.0
OD2 B:ASP578 2.0 24.5 1.0
OE2 B:GLU457 2.1 23.6 1.0
CG B:ASP578 2.9 31.9 1.0
CG B:ASN516 3.0 27.9 1.0
CD B:GLU457 3.1 30.2 1.0
CD B:GLU548 3.1 28.4 1.0
ND2 B:ASN516 3.4 34.7 1.0
OD1 B:ASP578 3.4 29.9 1.0
OE1 B:GLU457 3.6 28.8 1.0
OE2 B:GLU548 3.8 28.4 1.0
NZ B:LYS599 4.0 26.7 1.0
CB B:ASP578 4.1 24.9 1.0
CB B:GLU548 4.1 23.2 1.0
CG B:GLU548 4.2 23.6 1.0
CB B:ASN516 4.3 24.9 1.0
CG B:GLU457 4.4 23.4 1.0
OE2 B:GLU635 4.6 45.1 1.0
OE1 B:GLU635 4.9 45.4 1.0
CD B:LYS599 4.9 26.6 1.0

Reference:

R.Dias Teixeira, U.Jenal, S.Hiller. Structure of the Eal Domain of Bifa From Pseudomonas Aeruginosa To Be Published.
Page generated: Tue Apr 25 23:22:52 2023

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