Magnesium in PDB 8as7: Structure of the Sftsv L Protein Stalled at Early Elongation [Early- Elongation]

All present enzymatic activity of Structure of the Sftsv L Protein Stalled at Early Elongation [Early- Elongation]:
2.7.7.48;

The binding sites of Magnesium atom in the Structure of the Sftsv L Protein Stalled at Early Elongation [Early- Elongation] (pdb code 8as7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of the Sftsv L Protein Stalled at Early Elongation [Early- Elongation], PDB code: 8as7:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of the Sftsv L Protein Stalled at Early Elongation [Early- Elongation]


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Sftsv L Protein Stalled at Early Elongation [Early- Elongation] within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2101 b:28.0 occ:1.00 O A:ALA986 2.2 28.9 1.0 O1B A:2KH2104 2.5 40.8 1.0 O2A A:2KH2104 2.7 40.8 1.0 O1G A:2KH2104 2.7 40.8 1.0 OD2 A:ASP1126 3.0 33.3 1.0 C A:ALA986 3.4 28.9 1.0 N A:ALA986 3.6 28.9 1.0 PB A:2KH2104 3.7 40.8 1.0 CG A:ASP1126 3.9 33.3 1.0 PA A:2KH2104 4.0 40.8 1.0 CA A:ALA986 4.0 28.9 1.0 PG A:2KH2104 4.0 40.8 1.0 O3B A:2KH2104 4.1 40.8 1.0 N3A A:2KH2104 4.2 40.8 1.0 NZ A:LYS1170 4.3 27.9 0.5 CB A:ALA986 4.4 28.9 1.0 CB A:ASP985 4.5 27.8 1.0 N A:LYS987 4.5 26.8 1.0 O G:HOH101 4.5 34.6 1.0 C5' A:2KH2104 4.5 40.8 1.0 C A:ASP985 4.6 27.8 1.0 CB A:ASP1126 4.7 33.3 1.0 OD1 A:ASP1126 4.7 33.3 1.0 CA A:LYS987 4.8 26.8 1.0 O5' A:2KH2104 4.8 40.8 1.0 CA A:ASP985 4.8 27.8 1.0 O3G A:2KH2104 4.9 40.8 1.0 O2B A:2KH2104 5.0 40.8 1.0

Magnesium binding site 2 out of 2 in the Structure of the Sftsv L Protein Stalled at Early Elongation [Early- Elongation]


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Sftsv L Protein Stalled at Early Elongation [Early- Elongation] within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2102 b:28.8 occ:1.00 OD1 A:ASP1127 2.1 32.7 1.0 OD1 A:ASP985 2.3 27.8 1.0 O A:HOH2201 2.5 27.3 1.0 O A:HOH2203 2.6 26.9 1.0 CG A:ASP1127 3.2 32.7 1.0 O A:ASN984 3.3 22.4 1.0 CG A:ASP985 3.3 27.8 1.0 OD2 A:ASP1127 3.6 32.7 1.0 OD2 A:ASP985 3.7 27.8 1.0 OE1 A:GLU1180 3.8 29.2 1.0 O A:TYR1181 3.8 30.9 1.0 OE2 A:GLU1180 4.0 29.2 1.0 C A:ASN984 4.1 22.4 1.0 CD A:GLU1180 4.3 29.2 1.0 CB A:ASP1127 4.5 32.7 1.0 O A:SER1128 4.6 27.7 1.0 N A:ASN984 4.6 22.4 1.0 CB A:ASP985 4.6 27.8 1.0 O A:GLU1180 4.6 29.2 1.0 N A:ASP985 4.7 27.8 1.0 CA A:ASP985 4.7 27.8 1.0 N A:SER1128 4.8 27.7 1.0 C A:SER983 4.8 24.2 1.0 C A:TYR1181 4.8 30.9 1.0 CA A:ASP1127 4.8 32.7 1.0 CA A:ASN984 4.9 22.4 1.0 CB A:SER983 5.0 24.2 1.0

H.M.Williams, S.R.Thorkelsson, D.Vogel, M.Milewski, C.Busch, S.Cusack, K.Grunewald, E.R.J.Quemin, M.Rosenthal. Structural Insights Into Viral Genome Replication By the Severe Fever with Thrombocytopenia Syndrome Virus L Protein Nucleic Acids Res. 2023.
ISSN: ESSN 1362-4962
DOI: 10.1093/NAR/GKAC1249