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Magnesium in PDB 8b1u: Recbcd-Dna in Complex with the Phage Protein ABC2 and Host Ppib

Enzymatic activity of Recbcd-Dna in Complex with the Phage Protein ABC2 and Host Ppib

All present enzymatic activity of Recbcd-Dna in Complex with the Phage Protein ABC2 and Host Ppib:
3.1.11.5;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Recbcd-Dna in Complex with the Phage Protein ABC2 and Host Ppib (pdb code 8b1u). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Recbcd-Dna in Complex with the Phage Protein ABC2 and Host Ppib, PDB code: 8b1u:

Magnesium binding site 1 out of 1 in 8b1u

Go back to Magnesium Binding Sites List in 8b1u
Magnesium binding site 1 out of 1 in the Recbcd-Dna in Complex with the Phage Protein ABC2 and Host Ppib


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Recbcd-Dna in Complex with the Phage Protein ABC2 and Host Ppib within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1502

b:49.0
occ:1.00
OG1 B:THR30 2.2 44.4 1.0
O2G B:ANP1501 2.2 54.7 1.0
O1B B:ANP1501 2.5 54.7 1.0
OE2 B:GLU385 3.1 43.5 1.0
CB B:THR30 3.5 44.4 1.0
PG B:ANP1501 3.6 54.7 1.0
PB B:ANP1501 3.9 54.7 1.0
O2A B:ANP1501 4.0 54.7 1.0
O1G B:ANP1501 4.0 54.7 1.0
N3B B:ANP1501 4.3 54.7 1.0
CG2 B:THR30 4.3 44.4 1.0
N B:THR30 4.3 44.4 1.0
CA B:GLY746 4.4 46.8 1.0
CD B:GLU385 4.4 43.5 1.0
CA B:THR30 4.5 44.4 1.0
OD2 B:ASP384 4.5 41.5 1.0
O2B B:ANP1501 4.7 54.7 1.0
O3G B:ANP1501 4.8 54.7 1.0
O1A B:ANP1501 4.8 54.7 1.0
O B:GLY746 4.8 46.8 1.0
PA B:ANP1501 4.8 54.7 1.0
O3A B:ANP1501 4.9 54.7 1.0

Reference:

M.Wilkinson, O.J.Wilkinson, C.Feyerherm, E.E.Fletcher, D.B.Wigley, M.S.Dillingham. Structures of Recbcd in Complex with Phage-Encoded Inhibitor Proteins Reveal Distinctive Strategies For Evasion of A Bacterial Immunity Hub. Elife V. 11 2022.
ISSN: ESSN 2050-084X
PubMed: 36533901
DOI: 10.7554/ELIFE.83409
Page generated: Thu Oct 3 19:07:46 2024

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