Magnesium in PDB 8ba5: Crystal Structure of the DNMT3A Add Domain

All present enzymatic activity of Crystal Structure of the DNMT3A Add Domain:
2.1.1.37;

The structure of Crystal Structure of the DNMT3A Add Domain, PDB code: 8ba5 was solved by V.Linhard, S.Kunert, J.Wollenhaupt, A.Broehm, H.Schwalbe, A.Jeltsch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.00 / 1.45
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	57.8, 57.8, 138.56, 90, 90, 120
R / Rfree (%)	18.7 / 21.3

The structure of Crystal Structure of the DNMT3A Add Domain also contains other interesting chemical elements:

Zinc

(Zn)

3 atoms

The binding sites of Magnesium atom in the Crystal Structure of the DNMT3A Add Domain (pdb code 8ba5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the DNMT3A Add Domain, PDB code: 8ba5:

Magnesium binding site 1 out of 1 in the Crystal Structure of the DNMT3A Add Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the DNMT3A Add Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg706 b:15.5 occ:0.52 O A:HOH836 2.0 22.6 1.0 O A:HOH864 2.0 22.8 1.0 O1 A:EDO701 2.1 21.0 0.5 O2 A:EDO701 2.1 21.1 0.5 C1 A:EDO701 3.0 25.3 0.5 C2 A:EDO701 3.0 25.2 0.5 OD2 A:ASP529 4.0 24.5 1.0 O A:SER535 4.1 15.5 1.0 O A:HOH856 4.2 16.6 1.0 OD1 A:ASP529 4.5 19.3 1.0 O A:HOH900 4.5 26.3 1.0 O A:GLY543 4.7 17.3 1.0 CG A:ASP529 4.7 19.9 1.0

V.Linhard, S.Kunert, J.Wollenhaupt, H.Schwalbe, A.Jeltsch. Crystal Structure of the DNMT3A Add Domain To Be Published.