Magnesium in PDB 8bmq: Cryo-Em Structure of the Folate-Specific Ecf Transporter Complex in MSP2N2 Lipid Nanodiscs Bound to Amp-Pnp

The binding sites of Magnesium atom in the Cryo-Em Structure of the Folate-Specific Ecf Transporter Complex in MSP2N2 Lipid Nanodiscs Bound to Amp-Pnp (pdb code 8bmq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of the Folate-Specific Ecf Transporter Complex in MSP2N2 Lipid Nanodiscs Bound to Amp-Pnp, PDB code: 8bmq:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of the Folate-Specific Ecf Transporter Complex in MSP2N2 Lipid Nanodiscs Bound to Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of the Folate-Specific Ecf Transporter Complex in MSP2N2 Lipid Nanodiscs Bound to Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg302 b:23.1 occ:1.00 OD1 B:ASP170 2.3 17.6 1.0 OD2 B:ASP170 2.7 17.6 1.0 CG B:ASP170 2.7 17.6 1.0 O1G B:ANP301 3.0 31.3 1.0 OE1 B:GLN92 3.3 19.0 1.0 OG B:SER47 3.7 18.7 1.0 CB B:ASP170 4.1 17.6 1.0 CG1 B:VAL201 4.2 15.8 1.0 PG B:ANP301 4.3 31.3 1.0 CD B:GLN92 4.5 19.0 1.0 O2G B:ANP301 4.7 31.3 1.0 CA B:ASP170 4.8 17.6 1.0 CE B:LYS46 4.8 20.6 1.0 O3G B:ANP301 4.9 31.3 1.0 CB B:GLN92 4.9 19.0 1.0 O B:VAL201 5.0 15.8 1.0

C.Thangaratnarajah, M.Nijland, L.Borges-Araujo, A.Jeucken, J.Rheinberger, S.J.Marrink, P.C.T.Souza, C.Paulino, D.J.Slotboom. Expulsion Mechanism of the Substrate-Translocating Subunit in Ecf Transporters Expulsion Mechanism of the Substrate-Translocating Subunit in Ecf Transporters Nat Commun 2023.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-023-40266-1