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Magnesium in PDB 8c4t: Hantaan Virus Polymerase Bound to Its 5' Viral Rna

Enzymatic activity of Hantaan Virus Polymerase Bound to Its 5' Viral Rna

All present enzymatic activity of Hantaan Virus Polymerase Bound to Its 5' Viral Rna:
2.7.7.48;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Hantaan Virus Polymerase Bound to Its 5' Viral Rna (pdb code 8c4t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Hantaan Virus Polymerase Bound to Its 5' Viral Rna, PDB code: 8c4t:

Magnesium binding site 1 out of 1 in 8c4t

Go back to Magnesium Binding Sites List in 8c4t
Magnesium binding site 1 out of 1 in the Hantaan Virus Polymerase Bound to Its 5' Viral Rna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Hantaan Virus Polymerase Bound to Its 5' Viral Rna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2201

b:41.3
occ:1.00
OD1 A:ASP1099 2.7 46.9 1.0
OD2 A:ASP972 3.0 40.0 1.0
CG A:ASP1099 3.6 49.2 1.0
OE1 A:GLU1170 3.9 53.2 1.0
CG A:ASP972 4.0 41.2 1.0
OD2 A:ASP1099 4.0 47.8 1.0
O A:ALA971 4.0 29.9 1.0
CB A:ASP972 4.3 33.6 1.0
O A:GLU1170 4.5 49.0 1.0
C A:ALA971 4.5 19.8 1.0
O A:LYS1161 4.5 24.4 1.0
CB A:ASP1099 4.8 41.6 1.0
N A:ASP972 4.9 18.2 1.0
CA A:ASP972 4.9 28.5 1.0
N A:ALA971 5.0 29.4 1.0
C A:SER970 5.0 22.9 1.0
CA A:ASP1099 5.0 39.1 1.0

Reference:

Q.Durieux Trouilleton, S.Barata-Garcia, B.Arragain, J.Reguera, H.Malet. Structures of Active Hantaan Virus Polymerase Uncover the Mechanisms of Hantaviridae Genome Replication. Nat Commun V. 14 2954 2023.
ISSN: ESSN 2041-1723
PubMed: 37221161
DOI: 10.1038/S41467-023-38555-W
Page generated: Thu Oct 3 20:07:42 2024

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