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Magnesium in PDB 8c4z: Proteint Protease, Inactive Mutant S224A

Protein crystallography data

The structure of Proteint Protease, Inactive Mutant S224A, PDB code: 8c4z was solved by J.Nomme, S.Gavalda, G.Cioci, M.Guicherd, A.Marty, S.Duquesne, M.Ben Khaled, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.36 / 1.47
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.353, 80.559, 49.723, 90, 96.97, 90
R / Rfree (%) 13.9 / 17.9

Other elements in 8c4z:

The structure of Proteint Protease, Inactive Mutant S224A also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Proteint Protease, Inactive Mutant S224A (pdb code 8c4z). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Proteint Protease, Inactive Mutant S224A, PDB code: 8c4z:

Magnesium binding site 1 out of 1 in 8c4z

Go back to Magnesium Binding Sites List in 8c4z
Magnesium binding site 1 out of 1 in the Proteint Protease, Inactive Mutant S224A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Proteint Protease, Inactive Mutant S224A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:19.6
occ:1.00
O B:HOH584 2.0 27.4 1.0
OD2 B:ASP198 2.1 17.5 1.0
O B:HOH542 2.1 23.5 1.0
O B:ALA175 2.2 13.4 1.0
O B:HOH403 2.2 17.7 1.0
O B:THR173 2.2 12.3 1.0
CG B:ASP198 2.9 18.1 1.0
OD1 B:ASP198 2.9 22.8 1.0
C B:THR173 3.3 12.0 1.0
C B:ALA175 3.4 9.8 1.0
O B:HOH653 4.0 49.0 1.0
CA B:THR173 4.0 13.8 1.0
N B:ALA175 4.1 10.5 1.0
O B:VAL172 4.1 11.9 1.0
CA B:ILE176 4.1 8.1 1.0
N B:ILE176 4.2 7.5 1.0
C B:ALA174 4.2 11.4 1.0
N B:THR177 4.3 7.9 1.0
N B:ALA174 4.3 12.1 1.0
CB B:ASP198 4.3 14.1 1.0
O B:HOH418 4.3 35.1 1.0
CA B:ALA175 4.4 8.9 1.0
O B:HOH431 4.4 34.1 1.0
CA B:ALA174 4.5 11.1 1.0
OG1 B:THR177 4.6 9.8 1.0
O B:CYS196 4.6 16.3 1.0
O B:HOH408 4.6 35.9 1.0
O B:ALA174 4.7 11.4 1.0
C B:ILE176 4.7 8.7 1.0
CG2 B:THR173 4.8 20.2 1.0
O B:HOH407 4.9 24.3 1.0
C B:VAL172 5.0 11.7 1.0

Reference:

G.Cioci, S.Gavalda, J.Nomme, M.Guicherd, A.Marty, S.Duquesne, M.Ben Khaled. Proteint Protease To Be Published.
Page generated: Thu Oct 3 20:08:24 2024

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