Magnesium in PDB 8cmo: Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Other elements in 8cmo:
The structure of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
160;
Page 17, Binding sites: 161 -
170;
Page 18, Binding sites: 171 -
180;
Page 19, Binding sites: 181 -
190;
Page 20, Binding sites: 191 -
200;
Page 21, Binding sites: 201 -
210;
Page 22, Binding sites: 211 -
220;
Page 23, Binding sites: 221 -
230;
Page 24, Binding sites: 231 -
236;
Binding sites:
The binding sites of Magnesium atom in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
(pdb code 8cmo). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 236 binding sites of Magnesium where determined in the
Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp., PDB code: 8cmo:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 1 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg801
b:72.2
occ:1.00
|
MG
|
A:CL0801
|
0.0
|
72.2
|
1.0
|
ND
|
A:CL0801
|
2.0
|
72.2
|
1.0
|
NB
|
A:CL0801
|
2.1
|
72.2
|
1.0
|
NC
|
A:CL0801
|
2.1
|
72.2
|
1.0
|
NA
|
A:CL0801
|
2.3
|
72.2
|
1.0
|
C4D
|
A:CL0801
|
3.0
|
72.2
|
1.0
|
C4B
|
A:CL0801
|
3.0
|
72.2
|
1.0
|
C1B
|
A:CL0801
|
3.1
|
72.2
|
1.0
|
C1C
|
A:CL0801
|
3.1
|
72.2
|
1.0
|
NE2
|
A:HIS676
|
3.2
|
71.5
|
1.0
|
C1D
|
A:CL0801
|
3.2
|
72.2
|
1.0
|
C4C
|
A:CL0801
|
3.2
|
72.2
|
1.0
|
C4A
|
A:CL0801
|
3.2
|
72.2
|
1.0
|
C1A
|
A:CL0801
|
3.2
|
72.2
|
1.0
|
CHC
|
A:CL0801
|
3.4
|
72.2
|
1.0
|
CHC
|
B:CLA805
|
3.4
|
72.9
|
1.0
|
CHB
|
A:CL0801
|
3.4
|
72.2
|
1.0
|
C4B
|
B:CLA805
|
3.5
|
72.9
|
1.0
|
CHA
|
A:CL0801
|
3.5
|
72.2
|
1.0
|
CHD
|
A:CL0801
|
3.6
|
72.2
|
1.0
|
C3B
|
B:CLA805
|
3.8
|
72.9
|
1.0
|
CD2
|
A:HIS676
|
3.8
|
71.5
|
1.0
|
CAB
|
B:CLA805
|
4.0
|
72.9
|
1.0
|
C1C
|
B:CLA805
|
4.1
|
72.9
|
1.0
|
NB
|
B:CLA805
|
4.1
|
72.9
|
1.0
|
CE1
|
A:HIS676
|
4.2
|
71.5
|
1.0
|
CBB
|
B:CLA805
|
4.2
|
72.9
|
1.0
|
C3D
|
A:CL0801
|
4.2
|
72.2
|
1.0
|
C3B
|
A:CL0801
|
4.3
|
72.2
|
1.0
|
C2B
|
A:CL0801
|
4.4
|
72.2
|
1.0
|
C2D
|
A:CL0801
|
4.4
|
72.2
|
1.0
|
C2C
|
A:CL0801
|
4.4
|
72.2
|
1.0
|
C3C
|
A:CL0801
|
4.5
|
72.2
|
1.0
|
C2B
|
B:CLA805
|
4.5
|
72.9
|
1.0
|
C3A
|
A:CL0801
|
4.5
|
72.2
|
1.0
|
C2A
|
A:CL0801
|
4.6
|
72.2
|
1.0
|
NC
|
B:CLA805
|
4.6
|
72.9
|
1.0
|
C1B
|
B:CLA805
|
4.7
|
72.9
|
1.0
|
C2C
|
B:CLA805
|
4.8
|
72.9
|
1.0
|
CED
|
A:CLA802
|
4.9
|
74.4
|
1.0
|
CG
|
A:HIS676
|
5.0
|
71.5
|
1.0
|
|
Magnesium binding site 2 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 2 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg802
b:74.4
occ:1.00
|
MG
|
A:CLA802
|
0.0
|
74.4
|
1.0
|
ND
|
A:CLA802
|
2.0
|
74.4
|
1.0
|
NB
|
A:CLA802
|
2.0
|
74.4
|
1.0
|
NC
|
A:CLA802
|
2.1
|
74.4
|
1.0
|
NA
|
A:CLA802
|
2.2
|
74.4
|
1.0
|
O
|
B:HOH6012
|
2.2
|
30.0
|
1.0
|
CBB
|
B:CLA801
|
2.6
|
74.2
|
1.0
|
C4D
|
A:CLA802
|
2.9
|
74.4
|
1.0
|
C4B
|
A:CLA802
|
3.0
|
74.4
|
1.0
|
C1C
|
A:CLA802
|
3.0
|
74.4
|
1.0
|
C1B
|
A:CLA802
|
3.1
|
74.4
|
1.0
|
C1D
|
A:CLA802
|
3.1
|
74.4
|
1.0
|
C4A
|
A:CLA802
|
3.2
|
74.4
|
1.0
|
C1A
|
A:CLA802
|
3.2
|
74.4
|
1.0
|
C4C
|
A:CLA802
|
3.2
|
74.4
|
1.0
|
CHC
|
A:CLA802
|
3.3
|
74.4
|
1.0
|
CHB
|
A:CLA802
|
3.4
|
74.4
|
1.0
|
CHA
|
A:CLA802
|
3.5
|
74.4
|
1.0
|
CHD
|
A:CLA802
|
3.5
|
74.4
|
1.0
|
CAB
|
B:CLA801
|
3.6
|
74.2
|
1.0
|
C3D
|
A:CLA802
|
4.2
|
74.4
|
1.0
|
C3B
|
B:CLA801
|
4.2
|
74.2
|
1.0
|
C3B
|
A:CLA802
|
4.2
|
74.4
|
1.0
|
C2B
|
A:CLA802
|
4.3
|
74.4
|
1.0
|
C2D
|
A:CLA802
|
4.3
|
74.4
|
1.0
|
C2C
|
A:CLA802
|
4.4
|
74.4
|
1.0
|
C3C
|
A:CLA802
|
4.4
|
74.4
|
1.0
|
C3A
|
A:CLA802
|
4.5
|
74.4
|
1.0
|
CMB
|
B:CLA801
|
4.5
|
74.2
|
1.0
|
C2A
|
A:CLA802
|
4.5
|
74.4
|
1.0
|
CB
|
A:ALA680
|
4.5
|
70.9
|
1.0
|
C2B
|
B:CLA801
|
4.6
|
74.2
|
1.0
|
OD1
|
B:ASN586
|
4.7
|
72.6
|
1.0
|
C2
|
B:CLA805
|
4.7
|
72.9
|
1.0
|
CZ2
|
B:TRP590
|
4.9
|
73.4
|
1.0
|
CBD
|
A:CLA802
|
4.9
|
74.4
|
1.0
|
|
Magnesium binding site 3 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 3 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:80.3
occ:1.00
|
MG
|
A:CLA803
|
0.0
|
80.3
|
1.0
|
ND
|
A:CLA803
|
2.0
|
80.3
|
1.0
|
NB
|
A:CLA803
|
2.0
|
80.3
|
1.0
|
NC
|
A:CLA803
|
2.1
|
80.3
|
1.0
|
NA
|
A:CLA803
|
2.2
|
80.3
|
1.0
|
NE2
|
A:HIS53
|
2.3
|
76.9
|
1.0
|
C4D
|
A:CLA803
|
2.9
|
80.3
|
1.0
|
C4B
|
A:CLA803
|
3.0
|
80.3
|
1.0
|
C1C
|
A:CLA803
|
3.0
|
80.3
|
1.0
|
C1B
|
A:CLA803
|
3.1
|
80.3
|
1.0
|
C1D
|
A:CLA803
|
3.1
|
80.3
|
1.0
|
CE1
|
A:HIS53
|
3.2
|
76.9
|
1.0
|
C4A
|
A:CLA803
|
3.2
|
80.3
|
1.0
|
C1A
|
A:CLA803
|
3.2
|
80.3
|
1.0
|
C4C
|
A:CLA803
|
3.2
|
80.3
|
1.0
|
CHC
|
A:CLA803
|
3.3
|
80.3
|
1.0
|
CD2
|
A:HIS53
|
3.4
|
76.9
|
1.0
|
CHB
|
A:CLA803
|
3.4
|
80.3
|
1.0
|
CHA
|
A:CLA803
|
3.5
|
80.3
|
1.0
|
CHD
|
A:CLA803
|
3.6
|
80.3
|
1.0
|
CG
|
J:PRO12
|
3.9
|
79.8
|
1.0
|
CB
|
J:PRO12
|
3.9
|
79.8
|
1.0
|
C3D
|
A:CLA803
|
4.2
|
80.3
|
1.0
|
C3B
|
A:CLA803
|
4.2
|
80.3
|
1.0
|
C2B
|
A:CLA803
|
4.3
|
80.3
|
1.0
|
C2D
|
A:CLA803
|
4.3
|
80.3
|
1.0
|
ND1
|
A:HIS53
|
4.3
|
76.9
|
1.0
|
C2C
|
A:CLA803
|
4.4
|
80.3
|
1.0
|
C3C
|
A:CLA803
|
4.4
|
80.3
|
1.0
|
CG
|
A:HIS53
|
4.5
|
76.9
|
1.0
|
C3A
|
A:CLA803
|
4.5
|
80.3
|
1.0
|
C2A
|
A:CLA803
|
4.5
|
80.3
|
1.0
|
C17
|
J:C7Z105
|
4.5
|
81.8
|
1.0
|
CD
|
J:PRO12
|
4.8
|
79.8
|
1.0
|
C2
|
J:C7Z105
|
4.8
|
81.8
|
1.0
|
CBD
|
A:CLA803
|
4.9
|
80.3
|
1.0
|
|
Magnesium binding site 4 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 4 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:74.6
occ:1.00
|
MG
|
A:CLA804
|
0.0
|
74.6
|
1.0
|
ND
|
A:CLA804
|
2.0
|
74.6
|
1.0
|
NB
|
A:CLA804
|
2.0
|
74.6
|
1.0
|
NC
|
A:CLA804
|
2.1
|
74.6
|
1.0
|
NA
|
A:CLA804
|
2.2
|
74.6
|
1.0
|
C4D
|
A:CLA804
|
2.9
|
74.6
|
1.0
|
C4B
|
A:CLA804
|
3.0
|
74.6
|
1.0
|
C1C
|
A:CLA804
|
3.0
|
74.6
|
1.0
|
C1B
|
A:CLA804
|
3.1
|
74.6
|
1.0
|
NE2
|
A:HIS57
|
3.1
|
73.9
|
1.0
|
C1D
|
A:CLA804
|
3.1
|
74.6
|
1.0
|
C4A
|
A:CLA804
|
3.2
|
74.6
|
1.0
|
C1A
|
A:CLA804
|
3.2
|
74.6
|
1.0
|
C4C
|
A:CLA804
|
3.2
|
74.6
|
1.0
|
CHC
|
A:CLA804
|
3.3
|
74.6
|
1.0
|
CHB
|
A:CLA804
|
3.4
|
74.6
|
1.0
|
CHA
|
A:CLA804
|
3.5
|
74.6
|
1.0
|
CHD
|
A:CLA804
|
3.6
|
74.6
|
1.0
|
CBB
|
A:CLA803
|
3.7
|
80.3
|
1.0
|
C7
|
A:CLA811
|
3.8
|
76.5
|
1.0
|
CE1
|
A:HIS57
|
3.9
|
73.9
|
1.0
|
CD2
|
A:HIS57
|
4.0
|
73.9
|
1.0
|
C5
|
A:CLA811
|
4.1
|
76.5
|
1.0
|
C3D
|
A:CLA804
|
4.2
|
74.6
|
1.0
|
C3B
|
A:CLA804
|
4.2
|
74.6
|
1.0
|
C2B
|
A:CLA804
|
4.3
|
74.6
|
1.0
|
C2D
|
A:CLA804
|
4.3
|
74.6
|
1.0
|
C2C
|
A:CLA804
|
4.4
|
74.6
|
1.0
|
CAB
|
A:CLA803
|
4.4
|
80.3
|
1.0
|
C3C
|
A:CLA804
|
4.4
|
74.6
|
1.0
|
C3A
|
A:CLA804
|
4.5
|
74.6
|
1.0
|
C6
|
A:CLA811
|
4.5
|
76.5
|
1.0
|
C2A
|
A:CLA804
|
4.5
|
74.6
|
1.0
|
C11
|
A:CLA811
|
4.8
|
76.5
|
1.0
|
CBD
|
A:CLA804
|
4.9
|
74.6
|
1.0
|
C12
|
A:CLA811
|
5.0
|
76.5
|
1.0
|
|
Magnesium binding site 5 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 5 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:71.2
occ:1.00
|
MG
|
A:CLA805
|
0.0
|
71.2
|
1.0
|
ND
|
A:CLA805
|
2.0
|
71.2
|
1.0
|
NB
|
A:CLA805
|
2.0
|
71.2
|
1.0
|
NC
|
A:CLA805
|
2.1
|
71.2
|
1.0
|
NA
|
A:CLA805
|
2.2
|
71.2
|
1.0
|
NE2
|
A:HIS77
|
2.4
|
71.9
|
1.0
|
C4D
|
A:CLA805
|
2.9
|
71.2
|
1.0
|
CMB
|
A:CLA830
|
2.9
|
71.7
|
1.0
|
CD2
|
A:HIS77
|
2.9
|
71.9
|
1.0
|
C4B
|
A:CLA805
|
3.0
|
71.2
|
1.0
|
C1C
|
A:CLA805
|
3.0
|
71.2
|
1.0
|
C1B
|
A:CLA805
|
3.1
|
71.2
|
1.0
|
C1D
|
A:CLA805
|
3.1
|
71.2
|
1.0
|
C4A
|
A:CLA805
|
3.2
|
71.2
|
1.0
|
C1A
|
A:CLA805
|
3.2
|
71.2
|
1.0
|
C4C
|
A:CLA805
|
3.2
|
71.2
|
1.0
|
CHC
|
A:CLA805
|
3.3
|
71.2
|
1.0
|
CE1
|
A:HIS77
|
3.4
|
71.9
|
1.0
|
CHA
|
A:CLA805
|
3.4
|
71.2
|
1.0
|
CHB
|
A:CLA805
|
3.4
|
71.2
|
1.0
|
CHD
|
A:CLA805
|
3.6
|
71.2
|
1.0
|
CG
|
A:HIS77
|
4.1
|
71.9
|
1.0
|
C3D
|
A:CLA805
|
4.2
|
71.2
|
1.0
|
C3B
|
A:CLA805
|
4.2
|
71.2
|
1.0
|
CBB
|
A:CLA830
|
4.2
|
71.7
|
1.0
|
ND1
|
A:HIS77
|
4.3
|
71.9
|
1.0
|
C2B
|
A:CLA805
|
4.3
|
71.2
|
1.0
|
C2D
|
A:CLA805
|
4.3
|
71.2
|
1.0
|
C2C
|
A:CLA805
|
4.4
|
71.2
|
1.0
|
C2B
|
A:CLA830
|
4.4
|
71.7
|
1.0
|
C3C
|
A:CLA805
|
4.4
|
71.2
|
1.0
|
CG1
|
A:VAL73
|
4.4
|
73.2
|
1.0
|
C3A
|
A:CLA805
|
4.5
|
71.2
|
1.0
|
C2A
|
A:CLA805
|
4.5
|
71.2
|
1.0
|
CBD
|
A:CLA805
|
4.9
|
71.2
|
1.0
|
|
Magnesium binding site 6 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 6 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg806
b:70.4
occ:1.00
|
MG
|
A:CLA806
|
0.0
|
70.4
|
1.0
|
ND
|
A:CLA806
|
2.0
|
70.4
|
1.0
|
NB
|
A:CLA806
|
2.0
|
70.4
|
1.0
|
NC
|
A:CLA806
|
2.1
|
70.4
|
1.0
|
NA
|
A:CLA806
|
2.2
|
70.4
|
1.0
|
OE1
|
A:GLN80
|
2.5
|
71.0
|
1.0
|
C4D
|
A:CLA806
|
2.9
|
70.4
|
1.0
|
C4B
|
A:CLA806
|
3.0
|
70.4
|
1.0
|
C18
|
A:CLA806
|
3.0
|
70.4
|
1.0
|
C1C
|
A:CLA806
|
3.0
|
70.4
|
1.0
|
C1B
|
A:CLA806
|
3.1
|
70.4
|
1.0
|
C1D
|
A:CLA806
|
3.1
|
70.4
|
1.0
|
C4A
|
A:CLA806
|
3.2
|
70.4
|
1.0
|
C1A
|
A:CLA806
|
3.2
|
70.4
|
1.0
|
C4C
|
A:CLA806
|
3.2
|
70.4
|
1.0
|
CD
|
A:GLN80
|
3.2
|
71.0
|
1.0
|
CHC
|
A:CLA806
|
3.3
|
70.4
|
1.0
|
CHB
|
A:CLA806
|
3.4
|
70.4
|
1.0
|
NE2
|
A:GLN80
|
3.4
|
71.0
|
1.0
|
CHA
|
A:CLA806
|
3.5
|
70.4
|
1.0
|
C19
|
A:CLA806
|
3.5
|
70.4
|
1.0
|
CHD
|
A:CLA806
|
3.6
|
70.4
|
1.0
|
C20
|
A:CLA806
|
3.8
|
70.4
|
1.0
|
C16
|
A:CLA806
|
3.9
|
70.4
|
1.0
|
C17
|
A:CLA806
|
4.0
|
70.4
|
1.0
|
C3D
|
A:CLA806
|
4.2
|
70.4
|
1.0
|
C3B
|
A:CLA806
|
4.2
|
70.4
|
1.0
|
C2B
|
A:CLA806
|
4.3
|
70.4
|
1.0
|
C2D
|
A:CLA806
|
4.3
|
70.4
|
1.0
|
C2C
|
A:CLA806
|
4.4
|
70.4
|
1.0
|
C3C
|
A:CLA806
|
4.4
|
70.4
|
1.0
|
C3A
|
A:CLA806
|
4.5
|
70.4
|
1.0
|
CG
|
A:GLN80
|
4.5
|
71.0
|
1.0
|
C2A
|
A:CLA806
|
4.5
|
70.4
|
1.0
|
CBD
|
A:CLA806
|
4.9
|
70.4
|
1.0
|
|
Magnesium binding site 7 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 7 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg807
b:81.4
occ:1.00
|
MG
|
A:CLA807
|
0.0
|
81.4
|
1.0
|
ND
|
A:CLA807
|
2.0
|
81.4
|
1.0
|
NB
|
A:CLA807
|
2.0
|
81.4
|
1.0
|
NC
|
A:CLA807
|
2.1
|
81.4
|
1.0
|
NA
|
A:CLA807
|
2.2
|
81.4
|
1.0
|
NE2
|
A:HIS94
|
2.6
|
77.6
|
1.0
|
C4D
|
A:CLA807
|
2.9
|
81.4
|
1.0
|
CE1
|
A:HIS94
|
2.9
|
77.6
|
1.0
|
C4B
|
A:CLA807
|
3.0
|
81.4
|
1.0
|
C1C
|
A:CLA807
|
3.0
|
81.4
|
1.0
|
C1B
|
A:CLA807
|
3.1
|
81.4
|
1.0
|
C1D
|
A:CLA807
|
3.1
|
81.4
|
1.0
|
C4A
|
A:CLA807
|
3.2
|
81.4
|
1.0
|
C1A
|
A:CLA807
|
3.2
|
81.4
|
1.0
|
C4C
|
A:CLA807
|
3.2
|
81.4
|
1.0
|
CAT
|
A:NKP851
|
3.3
|
86.9
|
1.0
|
CHC
|
A:CLA807
|
3.3
|
81.4
|
1.0
|
CAS
|
A:NKP851
|
3.4
|
86.9
|
1.0
|
CHB
|
A:CLA807
|
3.4
|
81.4
|
1.0
|
CHA
|
A:CLA807
|
3.5
|
81.4
|
1.0
|
CAR
|
A:NKP851
|
3.5
|
86.9
|
1.0
|
CHD
|
A:CLA807
|
3.6
|
81.4
|
1.0
|
O1A
|
A:CLA807
|
3.9
|
81.4
|
1.0
|
CD2
|
A:HIS94
|
3.9
|
77.6
|
1.0
|
C3D
|
A:CLA807
|
4.2
|
81.4
|
1.0
|
CAU
|
A:NKP851
|
4.2
|
86.9
|
1.0
|
ND1
|
A:HIS94
|
4.2
|
77.6
|
1.0
|
C3B
|
A:CLA807
|
4.2
|
81.4
|
1.0
|
C2B
|
A:CLA807
|
4.3
|
81.4
|
1.0
|
C2D
|
A:CLA807
|
4.3
|
81.4
|
1.0
|
C2C
|
A:CLA807
|
4.4
|
81.4
|
1.0
|
C3C
|
A:CLA807
|
4.4
|
81.4
|
1.0
|
C3A
|
A:CLA807
|
4.5
|
81.4
|
1.0
|
C2A
|
A:CLA807
|
4.5
|
81.4
|
1.0
|
CAQ
|
A:NKP851
|
4.5
|
86.9
|
1.0
|
CG
|
A:HIS94
|
4.7
|
77.6
|
1.0
|
CGA
|
A:CLA807
|
4.9
|
81.4
|
1.0
|
CBD
|
A:CLA807
|
4.9
|
81.4
|
1.0
|
|
Magnesium binding site 8 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 8 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg808
b:76.8
occ:1.00
|
MG
|
A:CLA808
|
0.0
|
76.8
|
1.0
|
ND
|
A:CLA808
|
2.0
|
76.8
|
1.0
|
NB
|
A:CLA808
|
2.0
|
76.8
|
1.0
|
NC
|
A:CLA808
|
2.1
|
76.8
|
1.0
|
NA
|
A:CLA808
|
2.2
|
76.8
|
1.0
|
OE1
|
A:GLN116
|
2.4
|
78.6
|
1.0
|
C4
|
A:CLA828
|
2.5
|
73.3
|
1.0
|
C4D
|
A:CLA808
|
2.9
|
76.8
|
1.0
|
C4B
|
A:CLA808
|
3.0
|
76.8
|
1.0
|
C1C
|
A:CLA808
|
3.0
|
76.8
|
1.0
|
C1B
|
A:CLA808
|
3.1
|
76.8
|
1.0
|
C1D
|
A:CLA808
|
3.1
|
76.8
|
1.0
|
C4A
|
A:CLA808
|
3.2
|
76.8
|
1.0
|
C1A
|
A:CLA808
|
3.2
|
76.8
|
1.0
|
C4C
|
A:CLA808
|
3.2
|
76.8
|
1.0
|
CHC
|
A:CLA808
|
3.3
|
76.8
|
1.0
|
CHB
|
A:CLA808
|
3.4
|
76.8
|
1.0
|
CHA
|
A:CLA808
|
3.5
|
76.8
|
1.0
|
CHD
|
A:CLA808
|
3.6
|
76.8
|
1.0
|
CD
|
A:GLN116
|
3.6
|
78.6
|
1.0
|
C3
|
A:CLA828
|
3.7
|
73.3
|
1.0
|
C5
|
A:CLA828
|
3.9
|
73.3
|
1.0
|
C3D
|
A:CLA808
|
4.2
|
76.8
|
1.0
|
C3B
|
A:CLA808
|
4.2
|
76.8
|
1.0
|
C2B
|
A:CLA808
|
4.3
|
76.8
|
1.0
|
C2D
|
A:CLA808
|
4.3
|
76.8
|
1.0
|
C2C
|
A:CLA808
|
4.4
|
76.8
|
1.0
|
C3C
|
A:CLA808
|
4.4
|
76.8
|
1.0
|
NE2
|
A:GLN116
|
4.4
|
78.6
|
1.0
|
C3A
|
A:CLA808
|
4.5
|
76.8
|
1.0
|
C2A
|
A:CLA808
|
4.5
|
76.8
|
1.0
|
O1A
|
A:CLA808
|
4.5
|
76.8
|
1.0
|
CG
|
A:GLN116
|
4.5
|
78.6
|
1.0
|
C2
|
A:CLA828
|
4.9
|
73.3
|
1.0
|
CBD
|
A:CLA808
|
4.9
|
76.8
|
1.0
|
|
Magnesium binding site 9 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 9 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg809
b:80.0
occ:1.00
|
MG
|
A:CLA809
|
0.0
|
80.0
|
1.0
|
ND
|
A:CLA809
|
2.0
|
80.0
|
1.0
|
NB
|
A:CLA809
|
2.0
|
80.0
|
1.0
|
NC
|
A:CLA809
|
2.1
|
80.0
|
1.0
|
NA
|
A:CLA809
|
2.2
|
80.0
|
1.0
|
OE1
|
A:GLN124
|
2.6
|
81.6
|
1.0
|
C20
|
A:CLA828
|
2.7
|
73.3
|
1.0
|
C4D
|
A:CLA809
|
2.9
|
80.0
|
1.0
|
C4B
|
A:CLA809
|
3.0
|
80.0
|
1.0
|
C1C
|
A:CLA809
|
3.0
|
80.0
|
1.0
|
C1B
|
A:CLA809
|
3.1
|
80.0
|
1.0
|
C1D
|
A:CLA809
|
3.1
|
80.0
|
1.0
|
C4A
|
A:CLA809
|
3.2
|
80.0
|
1.0
|
C1A
|
A:CLA809
|
3.2
|
80.0
|
1.0
|
C4C
|
A:CLA809
|
3.2
|
80.0
|
1.0
|
CHC
|
A:CLA809
|
3.3
|
80.0
|
1.0
|
CHB
|
A:CLA809
|
3.4
|
80.0
|
1.0
|
CHA
|
A:CLA809
|
3.4
|
80.0
|
1.0
|
CHD
|
A:CLA809
|
3.6
|
80.0
|
1.0
|
C18
|
A:CLA828
|
3.7
|
73.3
|
1.0
|
CD
|
A:GLN124
|
3.7
|
81.6
|
1.0
|
C17
|
A:CLA828
|
3.8
|
73.3
|
1.0
|
C19
|
A:CLA828
|
4.1
|
73.3
|
1.0
|
C3D
|
A:CLA809
|
4.2
|
80.0
|
1.0
|
C3B
|
A:CLA809
|
4.2
|
80.0
|
1.0
|
C2B
|
A:CLA809
|
4.3
|
80.0
|
1.0
|
C2D
|
A:CLA809
|
4.3
|
80.0
|
1.0
|
NE2
|
A:GLN124
|
4.4
|
81.6
|
1.0
|
C2C
|
A:CLA809
|
4.4
|
80.0
|
1.0
|
C3C
|
A:CLA809
|
4.4
|
80.0
|
1.0
|
C3A
|
A:CLA809
|
4.5
|
80.0
|
1.0
|
C2A
|
A:CLA809
|
4.5
|
80.0
|
1.0
|
CB
|
A:GLN124
|
4.9
|
81.6
|
1.0
|
CG
|
A:GLN124
|
4.9
|
81.6
|
1.0
|
CBD
|
A:CLA809
|
4.9
|
80.0
|
1.0
|
CBA
|
A:CLA809
|
5.0
|
80.0
|
1.0
|
|
Magnesium binding site 10 out
of 236 in 8cmo
Go back to
Magnesium Binding Sites List in 8cmo
Magnesium binding site 10 out
of 236 in the Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp.
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg810
b:74.3
occ:1.00
|
MG
|
A:CLA810
|
0.0
|
74.3
|
1.0
|
ND
|
A:CLA810
|
2.0
|
74.3
|
1.0
|
NB
|
A:CLA810
|
2.0
|
74.3
|
1.0
|
NC
|
A:CLA810
|
2.1
|
74.3
|
1.0
|
NA
|
A:CLA810
|
2.2
|
74.3
|
1.0
|
NE2
|
A:HIS180
|
2.8
|
71.8
|
1.0
|
C4D
|
A:CLA810
|
2.9
|
74.3
|
1.0
|
C4B
|
A:CLA810
|
3.0
|
74.3
|
1.0
|
C1C
|
A:CLA810
|
3.0
|
74.3
|
1.0
|
CE1
|
A:HIS180
|
3.1
|
71.8
|
1.0
|
C1B
|
A:CLA810
|
3.1
|
74.3
|
1.0
|
C1D
|
A:CLA810
|
3.1
|
74.3
|
1.0
|
C4A
|
A:CLA810
|
3.2
|
74.3
|
1.0
|
C19
|
A:CLA813
|
3.2
|
72.6
|
1.0
|
C1A
|
A:CLA810
|
3.2
|
74.3
|
1.0
|
C4C
|
A:CLA810
|
3.2
|
74.3
|
1.0
|
CHC
|
A:CLA810
|
3.3
|
74.3
|
1.0
|
CHB
|
A:CLA810
|
3.4
|
74.3
|
1.0
|
CHA
|
A:CLA810
|
3.5
|
74.3
|
1.0
|
CHD
|
A:CLA810
|
3.6
|
74.3
|
1.0
|
C17
|
A:CLA813
|
3.7
|
72.6
|
1.0
|
C18
|
A:CLA813
|
3.8
|
72.6
|
1.0
|
C20
|
A:CLA813
|
3.9
|
72.6
|
1.0
|
CD2
|
A:HIS180
|
4.1
|
71.8
|
1.0
|
C3D
|
A:CLA810
|
4.2
|
74.3
|
1.0
|
C3B
|
A:CLA810
|
4.2
|
74.3
|
1.0
|
O1A
|
A:CLA810
|
4.3
|
74.3
|
1.0
|
C2B
|
A:CLA810
|
4.3
|
74.3
|
1.0
|
ND1
|
A:HIS180
|
4.3
|
71.8
|
1.0
|
C2D
|
A:CLA810
|
4.3
|
74.3
|
1.0
|
C2C
|
A:CLA810
|
4.4
|
74.3
|
1.0
|
C3C
|
A:CLA810
|
4.4
|
74.3
|
1.0
|
C3A
|
A:CLA810
|
4.5
|
74.3
|
1.0
|
C2A
|
A:CLA810
|
4.5
|
74.3
|
1.0
|
C16
|
A:CLA813
|
4.8
|
72.6
|
1.0
|
CG
|
A:HIS180
|
4.8
|
71.8
|
1.0
|
CBD
|
A:CLA810
|
4.9
|
74.3
|
1.0
|
|
Reference:
M.Fadeeva,
D.Klaiman,
N.Nelson.
Cryo-Em Structure of the Photosystem I - Lhci Supercomplex From Coelastrella Sp. To Be Published.
Page generated: Thu Oct 3 22:40:15 2024
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