Magnesium in PDB 8d2n: Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Pre- Cleavage)

The binding sites of Magnesium atom in the Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Pre- Cleavage) (pdb code 8d2n). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Pre- Cleavage), PDB code: 8d2n:

Magnesium binding site 1 out of 1 in the Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Pre- Cleavage)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Pre- Cleavage) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1201 b:17.8 occ:1.00 OD2 A:ASP18 2.1 19.7 1.0 CD2 A:HIS750 2.3 8.8 1.0 CG A:ASP18 3.0 19.0 1.0 NE2 A:HIS750 3.1 17.8 1.0 OD1 A:ASP18 3.2 14.5 1.0 CG A:HIS750 3.4 14.3 1.0 NE2 A:HIS749 3.8 18.5 1.0 NH1 A:ARG744 3.9 32.7 1.0 CB A:HIS750 4.1 15.3 1.0 OD2 A:ASP753 4.1 24.8 1.0 CA A:HIS750 4.1 16.8 1.0 CE1 A:HIS750 4.2 21.5 1.0 CD2 A:HIS749 4.3 16.5 1.0 ND1 A:HIS750 4.4 25.2 1.0 CB A:ASP18 4.4 12.6 1.0 CE1 A:HIS749 4.6 16.4 1.0 CZ A:ARG744 4.8 29.4 1.0 NH2 A:ARG744 4.9 25.8 1.0 N A:HIS750 4.9 15.6 1.0 OG A:SER23 4.9 21.3 1.0 O A:ASP18 5.0 24.5 1.0

A.Das, J.Rai, M.O.Roth, Y.Shu, M.L.Medina, M.R.Barakat, H.Li. Coupled Catalytic States and the Role of Metal Coordination in CAS9 Nat Catal V. 6 969 2023.
ISSN: ESSN 2520-1158
DOI: 10.1038/S41929-023-01031-1