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Magnesium in PDB 8dnc: Cryoem Structure of the A. Aeolicus Wzmwzt Transporter Bound to the Native O Antigen and Adp

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryoem Structure of the A. Aeolicus Wzmwzt Transporter Bound to the Native O Antigen and Adp (pdb code 8dnc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryoem Structure of the A. Aeolicus Wzmwzt Transporter Bound to the Native O Antigen and Adp, PDB code: 8dnc:

Magnesium binding site 1 out of 1 in 8dnc

Go back to Magnesium Binding Sites List in 8dnc
Magnesium binding site 1 out of 1 in the Cryoem Structure of the A. Aeolicus Wzmwzt Transporter Bound to the Native O Antigen and Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryoem Structure of the A. Aeolicus Wzmwzt Transporter Bound to the Native O Antigen and Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:42.7
occ:1.00
O2B A:ADP502 2.0 50.7 1.0
PB A:ADP502 3.0 50.7 1.0
OG A:SER61 3.1 33.4 1.0
O1B A:ADP502 3.3 50.7 1.0
O3B A:ADP502 3.7 50.7 1.0
CB A:SER61 4.2 33.4 1.0
O3A A:ADP502 4.3 50.7 1.0
CE A:LYS60 4.9 36.6 1.0

Reference:

N.Spellmon, A.Muszynski, I.Gorniak, J.Vlach, D.Hahn, P.Azadi, J.Zimmer. Molecular Basis For Polysaccharide Recognition and Modulated Atp Hydrolysis By the O Antigen Abc Transporter. Nat Commun V. 13 5226 2022.
ISSN: ESSN 2041-1723
PubMed: 36064941
DOI: 10.1038/S41467-022-32597-2
Page generated: Fri Oct 4 00:46:18 2024

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