Magnesium in PDB 8eda: An Alternating at Dodecamer Benzimidazole (DB1476) Complex

The structure of An Alternating at Dodecamer Benzimidazole (DB1476) Complex, PDB code: 8eda was solved by E.N.Ogbonna, W.D.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.21 / 1.63
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	25.743, 39.895, 66.465, 90, 90, 90
R / Rfree (%)	18.3 / 20.1

The binding sites of Magnesium atom in the An Alternating at Dodecamer Benzimidazole (DB1476) Complex (pdb code 8eda). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the An Alternating at Dodecamer Benzimidazole (DB1476) Complex, PDB code: 8eda:

Magnesium binding site 1 out of 1 in the An Alternating at Dodecamer Benzimidazole (DB1476) Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of An Alternating at Dodecamer Benzimidazole (DB1476) Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg102 b:23.2 occ:1.00 O B:HOH237 2.0 20.1 1.0 O B:HOH210 2.1 21.0 1.0 O B:HOH212 2.2 22.1 1.0 O B:HOH255 4.2 39.3 1.0 OP1 B:DT6 4.2 22.0 1.0 O B:HOH261 4.3 25.2 1.0 OP2 B:DA7 4.4 19.8 1.0 O B:HOH221 4.5 23.7 1.0 OP2 B:DT6 4.5 21.0 1.0 O5' B:DT6 4.6 21.2 1.0 P B:DT6 4.6 23.1 1.0 O B:HOH220 4.9 26.6 1.0

E.N.Ogbonna, A.Paul, A.Faharat, J.R.Terrell, V.Ogbonna, D.W.Boykin, W.D.Wilson. X-Ray Structure Characterization of the Selective Recognition of at Base Pair Sequences Acs Bio Med Chem Au 2023.
ISSN: ESSN 2694-2437