Magnesium in PDB 8eob: Cryo-Em Structure of Human HSP90B in the Closed State

The binding sites of Magnesium atom in the Cryo-Em Structure of Human HSP90B in the Closed State (pdb code 8eob). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of Human HSP90B in the Closed State, PDB code: 8eob:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Cryo-Em Structure of Human HSP90B in the Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Human HSP90B in the Closed State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg802 b:63.4 occ:1.00 N3B A:ANP801 2.1 83.0 1.0 OD1 A:ASN46 2.2 67.6 1.0 O2A A:ANP801 2.6 77.4 1.0 O3G A:ANP801 2.9 79.0 1.0 PG A:ANP801 3.1 85.9 1.0 CG A:ASN46 3.3 67.9 1.0 PB A:ANP801 3.5 72.5 1.0 OE1 A:GLU42 3.8 92.6 1.0 O2B A:ANP801 3.8 82.3 1.0 PA A:ANP801 3.9 67.3 1.0 ND2 A:ASN46 3.9 65.5 1.0 O2G A:ANP801 4.1 71.0 1.0 O3A A:ANP801 4.1 67.8 1.0 O1G A:ANP801 4.2 82.2 1.0 O A:GLU42 4.3 81.0 1.0 CA A:GLY132 4.3 55.1 1.0 N A:ASN46 4.4 50.8 1.0 CA A:GLY127 4.4 85.9 1.0 O1A A:ANP801 4.5 78.4 1.0 CB A:ASN46 4.6 65.2 1.0 CB A:SER45 4.6 61.0 1.0 CA A:ASN46 4.6 60.1 1.0 O1B A:ANP801 4.6 73.4 1.0 C A:GLY132 4.9 58.6 1.0 N A:GLY127 5.0 90.0 1.0 C A:GLU42 5.0 67.1 1.0 N A:GLY132 5.0 74.1 1.0

Magnesium binding site 2 out of 2 in the Cryo-Em Structure of Human HSP90B in the Closed State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Human HSP90B in the Closed State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg802 b:65.7 occ:1.00 O1B B:ANP801 2.0 81.7 1.0 O2G B:ANP801 2.0 88.9 1.0 OD1 B:ASN46 2.1 78.1 1.0 O2A B:ANP801 2.4 80.6 1.0 CG B:ASN46 2.5 72.3 1.0 ND2 B:ASN46 2.6 74.1 1.0 PB B:ANP801 3.4 68.5 1.0 PG B:ANP801 3.5 88.2 1.0 PA B:ANP801 3.8 59.2 1.0 CB B:ASN46 3.9 65.7 1.0 OE1 B:GLU42 4.0 89.5 1.0 O B:GLU42 4.1 84.8 1.0 O1G B:ANP801 4.1 67.9 1.0 N3B B:ANP801 4.1 68.9 1.0 N B:ASN46 4.1 55.7 1.0 O3A B:ANP801 4.1 60.6 1.0 CA B:ASN46 4.2 57.3 1.0 CA B:GLY132 4.4 59.3 1.0 O2B B:ANP801 4.4 69.9 1.0 O3G B:ANP801 4.6 82.3 1.0 C B:GLY132 4.7 64.3 1.0 O1A B:ANP801 4.7 79.6 1.0 CB B:SER45 4.7 50.3 1.0 O5' B:ANP801 4.8 68.3 1.0 C B:GLU42 4.8 75.9 1.0 N B:PHE133 4.8 67.0 1.0 C B:SER45 4.9 51.5 1.0 CA B:GLY127 4.9 89.9 1.0 CB B:GLU42 5.0 66.2 1.0 N B:GLY132 5.0 69.2 1.0 CA B:GLU42 5.0 66.6 1.0

D.Srivastava, N.O.Artemyev. Interface and Dynamics of the Complex of HSP90 with A Specialized Cochaperone AIPL1 To Be Published.