Magnesium in PDB 8esc: Structure of the Yeast NUA4 Histone Acetyltransferase Complex

The binding sites of Magnesium atom in the Structure of the Yeast NUA4 Histone Acetyltransferase Complex (pdb code 8esc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of the Yeast NUA4 Histone Acetyltransferase Complex, PDB code: 8esc:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of the Yeast NUA4 Histone Acetyltransferase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Yeast NUA4 Histone Acetyltransferase Complex within 5.0Å range: probe atom residue distance (Å) B Occ R:Mg502 b:22.7 occ:1.00 O3B R:ATP501 2.7 25.9 1.0 O3G R:ATP501 2.9 25.9 1.0 PG R:ATP501 3.4 25.9 1.0 O1B R:ATP501 3.6 25.9 1.0 PB R:ATP501 3.7 25.9 1.0 O1G R:ATP501 4.1 25.9 1.0 O3A R:ATP501 4.2 25.9 1.0 O2G R:ATP501 4.7 25.9 1.0 OD2 R:ASP159 4.7 26.1 1.0 O2B R:ATP501 5.0 25.9 1.0

Magnesium binding site 2 out of 2 in the Structure of the Yeast NUA4 Histone Acetyltransferase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Yeast NUA4 Histone Acetyltransferase Complex within 5.0Å range: probe atom residue distance (Å) B Occ R:Mg503 b:25.3 occ:1.00 O1B R:ATP501 2.2 25.9 1.0 O R:GLN449 2.8 21.3 1.0 O2A R:ATP501 3.1 25.9 1.0 O R:THR25 3.4 22.1 1.0 PB R:ATP501 3.5 25.9 1.0 ND2 R:ASN27 3.5 19.6 1.0 OG1 R:THR25 3.6 22.1 1.0 C R:GLN449 4.0 21.3 1.0 O2B R:ATP501 4.1 25.9 1.0 O3A R:ATP501 4.2 25.9 1.0 C R:THR25 4.2 22.1 1.0 PA R:ATP501 4.3 25.9 1.0 CG R:ASN27 4.4 19.6 1.0 OD2 R:ASP20 4.5 23.6 1.0 OD1 R:ASN27 4.6 19.6 1.0 CB R:THR25 4.6 22.1 1.0 N R:THR25 4.6 22.1 1.0 O3B R:ATP501 4.7 25.9 1.0 CA R:THR25 4.7 22.1 1.0 CA R:GLY22 4.8 24.3 1.0 CA R:GLN449 4.8 21.3 1.0 O R:ASP20 4.9 23.6 1.0

S.A.Zukin, M.R.Marunde, I.K.Popova, K.M.Soczek, E.Nogales, A.B.Patel. Structure and Flexibility of the Yeast NUA4 Histone Acetyltransferase Complex. Elife V. 11 2022.
ISSN: ESSN 2050-084X
PubMed: 36263929
DOI: 10.7554/ELIFE.81400