Magnesium in PDB 8f4k: Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution

Enzymatic activity of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution

All present enzymatic activity of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution:
1.10.3.9;

Protein crystallography data

The structure of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution, PDB code: 8f4k was solved by A.Bhowmick, R.Hussein, I.Bogacz, P.S.Simon, M.Ibrahim, R.Chatterjee, M.D.Doyle, M.H.Cheah, T.Fransson, P.Chernev, I.-S.Kim, H.Makita, M.Dasgupta, C.J.Kaminsky, M.Zhang, J.Gatcke, S.Haupt, I.I.Nangca, S.M.Keable, O.Aydin, K.Tono, S.Owada, L.B.Gee, F.D.Fuller, A.Batyuk, R.Alonso-Mori, J.M.Holton, D.W.Paley, N.W.Moriarty, F.Mamedov, P.D.Adams, A.S.Brewster, H.Dobbek, N.K.Sauter, U.Bergmann, A.Zouni, J.Messinger, J.Kern, J.Yano, V.K.Yachandra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.52 / 2.16
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 116.991, 221.755, 307.964, 90, 90, 90
R / Rfree (%) 18.5 / 24.1

Other elements in 8f4k:

The structure of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms
Manganese (Mn) 16 atoms
Iron (Fe) 6 atoms
Calcium (Ca) 4 atoms

Magnesium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70;

Binding sites:

The binding sites of Magnesium atom in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution (pdb code 8f4k). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 70 binding sites of Magnesium where determined in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution, PDB code: 8f4k:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 1 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg606

b:28.4
occ:1.00
MG A:CLA606 0.0 28.4 1.0
ND A:CLA606 2.0 23.7 1.0
NC A:CLA606 2.1 28.6 1.0
NB A:CLA606 2.1 30.7 1.0
NA A:CLA606 2.1 25.0 1.0
NE2 A:HIS198 2.2 31.6 1.0
C4D A:CLA606 2.9 25.0 1.0
C1C A:CLA606 3.0 27.5 1.0
C4B A:CLA606 3.1 27.8 1.0
C4A A:CLA606 3.1 30.4 1.0
CE1 A:HIS198 3.1 34.9 1.0
C1B A:CLA606 3.1 24.8 1.0
C4C A:CLA606 3.1 28.8 1.0
C1D A:CLA606 3.2 27.6 1.0
C1A A:CLA606 3.2 27.8 1.0
CD2 A:HIS198 3.3 30.3 1.0
CHC A:CLA606 3.4 27.4 1.0
CHA A:CLA606 3.5 27.5 1.0
CHB A:CLA606 3.5 29.2 1.0
CHD A:CLA606 3.6 28.7 1.0
CE A:MET183 4.1 29.5 0.3
C3D A:CLA606 4.2 27.1 1.0
CE A:MET183 4.2 27.6 0.7
ND1 A:HIS198 4.3 28.8 1.0
C2C A:CLA606 4.3 26.7 1.0
C3B A:CLA606 4.3 29.9 1.0
C2D A:CLA606 4.3 26.0 1.0
C3C A:CLA606 4.4 25.2 1.0
C2B A:CLA606 4.4 28.2 1.0
CG A:HIS198 4.4 36.7 1.0
CAB D:CLA403 4.4 30.7 1.0
C3A A:CLA606 4.4 31.4 1.0
C2A A:CLA606 4.5 29.4 1.0
CBD A:CLA606 4.9 30.4 1.0

Magnesium binding site 2 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 2 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg607

b:33.0
occ:1.00
MG A:CLA607 0.0 33.0 1.0
NB A:CLA607 2.0 39.6 1.0
NA A:CLA607 2.1 41.1 1.0
NC A:CLA607 2.1 33.3 1.0
ND A:CLA607 2.1 38.0 1.0
O A:HOH782 2.2 33.5 1.0
C4D A:CLA607 3.0 31.5 1.0
C1B A:CLA607 3.0 39.0 1.0
C4A A:CLA607 3.0 41.4 1.0
C1C A:CLA607 3.1 36.4 1.0
C4B A:CLA607 3.1 35.9 1.0
C1A A:CLA607 3.1 35.3 1.0
C4C A:CLA607 3.1 37.5 1.0
C1D A:CLA607 3.2 32.4 1.0
CHB A:CLA607 3.4 31.6 1.0
CHC A:CLA607 3.4 36.5 1.0
CHA A:CLA607 3.5 36.2 1.0
CHD A:CLA607 3.6 31.9 1.0
CBB D:PHO402 3.9 37.7 1.0
C3D A:CLA607 4.3 36.3 1.0
C2B A:CLA607 4.3 38.4 1.0
C3B A:CLA607 4.3 32.2 1.0
C2C A:CLA607 4.3 33.7 1.0
C3C A:CLA607 4.4 34.7 1.0
C3A A:CLA607 4.4 37.4 1.0
C2D A:CLA607 4.4 33.4 1.0
C2A A:CLA607 4.4 34.6 1.0
O D:HOH565 4.6 37.5 1.0
CBA A:CLA607 4.8 34.5 1.0
CG2 D:ILE178 4.9 37.1 1.0
CBD A:CLA607 4.9 33.9 1.0
CE2 A:PHE206 4.9 31.4 1.0

Magnesium binding site 3 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 3 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg609

b:30.4
occ:1.00
MG A:CLA609 0.0 30.4 1.0
NB A:CLA609 2.0 32.2 1.0
NC A:CLA609 2.0 30.7 1.0
ND A:CLA609 2.0 28.9 1.0
NA A:CLA609 2.1 28.7 1.0
NE2 A:HIS118 2.2 31.6 1.0
C4D A:CLA609 2.9 28.0 1.0
C1C A:CLA609 3.0 32.9 1.0
CE1 A:HIS118 3.0 29.6 1.0
C1B A:CLA609 3.0 33.2 1.0
C4B A:CLA609 3.0 30.6 1.0
C4A A:CLA609 3.1 29.4 1.0
C4C A:CLA609 3.1 32.9 1.0
C1A A:CLA609 3.2 31.6 1.0
C1D A:CLA609 3.2 31.9 1.0
CD2 A:HIS118 3.3 31.2 1.0
CHC A:CLA609 3.4 29.9 1.0
CHB A:CLA609 3.4 30.7 1.0
CHA A:CLA609 3.5 26.8 1.0
CHD A:CLA609 3.6 31.4 1.0
CG1 I:VAL8 4.2 35.9 1.0
ND1 A:HIS118 4.2 29.7 1.0
C3D A:CLA609 4.3 27.3 1.0
C2C A:CLA609 4.3 33.6 1.0
C2B A:CLA609 4.3 35.2 1.0
C3B A:CLA609 4.3 29.6 1.0
C3C A:CLA609 4.3 34.7 1.0
CG A:HIS118 4.4 34.0 1.0
C2D A:CLA609 4.4 32.5 1.0
C3A A:CLA609 4.4 29.9 1.0
C2A A:CLA609 4.5 36.0 1.0
CG2 I:VAL12 4.5 37.8 1.0
CBD A:CLA609 4.9 27.1 1.0

Magnesium binding site 4 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 4 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg612

b:29.8
occ:1.00
MG A:CLA612 0.0 29.8 1.0
NB A:CLA612 2.0 34.4 1.0
NC A:CLA612 2.1 25.6 1.0
ND A:CLA612 2.1 29.3 1.0
NA A:CLA612 2.1 28.7 1.0
O A:HOH788 2.1 27.9 1.0
C4D A:CLA612 3.0 33.5 1.0
C4B A:CLA612 3.0 27.4 1.0
C1B A:CLA612 3.0 31.6 1.0
C1C A:CLA612 3.0 33.8 1.0
C4A A:CLA612 3.1 29.0 1.0
C4C A:CLA612 3.1 28.5 1.0
C1D A:CLA612 3.2 30.5 1.0
C1A A:CLA612 3.2 34.7 1.0
CHC A:CLA612 3.4 28.4 1.0
CHB A:CLA612 3.4 30.5 1.0
CHA A:CLA612 3.5 33.3 1.0
CHD A:CLA612 3.5 33.3 1.0
CBB A:PHO608 4.0 26.8 1.0
O A:HOH799 4.0 26.7 1.0
C3B A:CLA612 4.3 27.4 1.0
C2B A:CLA612 4.3 28.9 1.0
C2C A:CLA612 4.3 35.1 1.0
C3D A:CLA612 4.3 30.1 1.0
C3C A:CLA612 4.3 28.4 1.0
C2D A:CLA612 4.4 30.0 1.0
CG2 A:THR179 4.4 26.8 0.7
C3A A:CLA612 4.4 35.2 1.0
CG2 A:THR179 4.5 32.1 0.3
C2A A:CLA612 4.5 29.9 1.0
OG1 A:THR179 4.6 24.3 0.7
OG1 A:THR179 4.6 28.8 0.3
C19 A:PHO608 4.7 33.3 1.0
CBA A:CLA612 4.8 30.5 1.0
CBD A:CLA612 5.0 31.9 1.0

Magnesium binding site 5 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 5 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg601

b:35.1
occ:1.00
MG B:CLA601 0.0 35.1 1.0
ND B:CLA601 2.0 39.7 1.0
NB B:CLA601 2.1 38.9 1.0
NA B:CLA601 2.1 40.3 1.0
NC B:CLA601 2.1 39.2 1.0
ND1 B:HIS201 2.2 35.9 1.0
C4D B:CLA601 2.9 35.2 1.0
CE1 B:HIS201 3.0 40.6 1.0
C4A B:CLA601 3.0 40.6 1.0
C1B B:CLA601 3.1 38.8 1.0
C4B B:CLA601 3.1 38.8 1.0
C1C B:CLA601 3.1 41.0 1.0
C1A B:CLA601 3.1 35.9 1.0
C1D B:CLA601 3.2 40.7 1.0
C4C B:CLA601 3.2 39.6 1.0
CG B:HIS201 3.3 33.2 1.0
CHB B:CLA601 3.4 31.9 1.0
CHA B:CLA601 3.5 36.1 1.0
CHC B:CLA601 3.5 37.2 1.0
CHD B:CLA601 3.5 42.7 1.0
CB B:HIS201 3.8 37.4 1.0
NE2 B:HIS201 4.2 34.7 1.0
C3D B:CLA601 4.2 33.8 1.0
C2B B:CLA601 4.3 34.7 1.0
C3B B:CLA601 4.3 38.0 1.0
C2D B:CLA601 4.4 39.3 1.0
CA B:HIS201 4.4 33.1 1.0
C3A B:CLA601 4.4 43.9 1.0
C2C B:CLA601 4.4 42.5 1.0
CD2 B:HIS201 4.4 32.5 1.0
C3C B:CLA601 4.4 38.6 1.0
CZ H:PHE41 4.4 60.3 1.0
C2A B:CLA601 4.4 38.8 1.0
CE1 B:PHE190 4.7 41.8 1.0
CD1 H:ILE45 4.9 48.0 1.0
CBD B:CLA601 4.9 34.9 1.0

Magnesium binding site 6 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 6 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:36.1
occ:1.00
MG B:CLA602 0.0 36.1 1.0
NB B:CLA602 2.0 32.7 1.0
NC B:CLA602 2.1 30.3 1.0
ND B:CLA602 2.1 34.3 1.0
NE2 B:HIS202 2.1 32.7 1.0
NA B:CLA602 2.1 29.5 1.0
C4D B:CLA602 3.0 36.0 1.0
C1B B:CLA602 3.0 29.3 1.0
C1C B:CLA602 3.1 29.8 1.0
C4B B:CLA602 3.1 35.1 1.0
CD2 B:HIS202 3.1 37.9 1.0
C4A B:CLA602 3.1 31.1 1.0
CE1 B:HIS202 3.1 36.0 1.0
C4C B:CLA602 3.1 32.3 1.0
C1A B:CLA602 3.2 32.4 1.0
C1D B:CLA602 3.2 31.3 1.0
CHC B:CLA602 3.4 32.2 1.0
CHB B:CLA602 3.4 31.5 1.0
CHA B:CLA602 3.5 30.3 1.0
CHD B:CLA602 3.6 28.6 1.0
ND1 B:HIS202 4.2 31.6 1.0
CG B:HIS202 4.2 37.2 1.0
C2B B:CLA602 4.3 31.1 1.0
C3B B:CLA602 4.3 36.5 1.0
C2C B:CLA602 4.3 30.4 1.0
C3D B:CLA602 4.4 36.1 1.0
C3C B:CLA602 4.4 28.7 1.0
C2D B:CLA602 4.4 32.0 1.0
C3A B:CLA602 4.5 30.9 1.0
C2A B:CLA602 4.5 34.9 1.0
C6 B:CLA604 4.6 43.3 1.0
C5 B:CLA604 4.6 33.5 1.0
C9 B:CLA604 4.7 39.8 1.0
NE2 B:HIS201 4.9 34.7 1.0
C7 B:CLA604 4.9 38.5 1.0
CD2 B:HIS201 5.0 32.5 1.0

Magnesium binding site 7 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 7 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg603

b:32.2
occ:1.00
MG B:CLA603 0.0 32.2 1.0
ND B:CLA603 2.0 35.0 1.0
NB B:CLA603 2.1 35.1 1.0
NA B:CLA603 2.1 38.1 1.0
NE2 B:HIS455 2.2 33.0 1.0
NC B:CLA603 2.2 34.6 1.0
C4D B:CLA603 3.0 29.8 1.0
C1B B:CLA603 3.0 35.6 1.0
C4A B:CLA603 3.0 36.4 1.0
CD2 B:HIS455 3.1 30.9 1.0
C1D B:CLA603 3.1 31.2 1.0
C4B B:CLA603 3.1 35.0 1.0
C1A B:CLA603 3.2 33.6 1.0
C4C B:CLA603 3.2 30.1 1.0
C1C B:CLA603 3.2 31.6 1.0
CE1 B:HIS455 3.2 27.1 1.0
CHB B:CLA603 3.4 35.3 1.0
CHA B:CLA603 3.5 36.7 1.0
CHD B:CLA603 3.5 30.6 1.0
CHC B:CLA603 3.6 35.2 1.0
C14 B:CLA611 4.0 34.8 1.0
C3D B:CLA603 4.3 31.8 1.0
CG B:HIS455 4.3 27.7 1.0
ND1 B:HIS455 4.3 25.7 1.0
C2B B:CLA603 4.3 30.2 1.0
C2D B:CLA603 4.3 34.0 1.0
C3B B:CLA603 4.4 32.7 1.0
C3A B:CLA603 4.4 35.0 1.0
C3C B:CLA603 4.5 33.2 1.0
C2C B:CLA603 4.5 31.2 1.0
C2A B:CLA603 4.5 31.9 1.0
C15 B:CLA611 4.6 39.7 1.0
C13 B:CLA611 4.8 41.4 1.0
CE2 B:PHE451 5.0 29.9 1.0
CBD B:CLA603 5.0 30.6 1.0

Magnesium binding site 8 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 8 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg604

b:32.0
occ:1.00
MG B:CLA604 0.0 32.0 1.0
NC B:CLA604 2.0 27.4 1.0
ND B:CLA604 2.0 35.2 1.0
NB B:CLA604 2.1 25.3 1.0
NA B:CLA604 2.2 32.2 1.0
NE2 B:HIS100 2.2 31.0 1.0
C4D B:CLA604 3.0 31.3 1.0
C1C B:CLA604 3.0 29.2 1.0
C4C B:CLA604 3.1 29.6 1.0
C4B B:CLA604 3.1 31.8 1.0
C1B B:CLA604 3.1 26.7 1.0
C1D B:CLA604 3.1 34.1 1.0
C4A B:CLA604 3.2 31.5 1.0
CD2 B:HIS100 3.2 29.7 1.0
CE1 B:HIS100 3.2 29.6 1.0
C1A B:CLA604 3.2 31.6 1.0
CHC B:CLA604 3.4 32.2 1.0
CHB B:CLA604 3.5 32.2 1.0
CHD B:CLA604 3.5 32.1 1.0
CHA B:CLA604 3.5 35.2 1.0
C3D B:CLA604 4.3 29.9 1.0
C2C B:CLA604 4.3 33.8 1.0
C3C B:CLA604 4.3 36.5 1.0
ND1 B:HIS100 4.3 30.0 1.0
CG B:HIS100 4.3 27.4 1.0
C1 B:CLA603 4.3 34.1 1.0
C3B B:CLA604 4.3 35.5 1.0
C2B B:CLA604 4.4 33.0 1.0
C2D B:CLA604 4.4 32.0 1.0
C2 B:CLA603 4.4 37.1 1.0
C3A B:CLA604 4.5 30.7 1.0
C2A B:CLA604 4.5 34.1 1.0
C4 B:CLA605 4.8 29.2 1.0
CBD B:CLA604 5.0 32.8 1.0
CBA B:CLA604 5.0 32.5 1.0

Magnesium binding site 9 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 9 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg605

b:34.2
occ:1.00
MG B:CLA605 0.0 34.2 1.0
NC B:CLA605 2.0 37.0 1.0
ND B:CLA605 2.0 43.1 1.0
NB B:CLA605 2.1 37.5 1.0
ND1 B:HIS157 2.2 36.4 1.0
NA B:CLA605 2.2 35.3 1.0
CE1 B:HIS157 2.9 37.3 1.0
C4D B:CLA605 3.0 41.6 1.0
C1C B:CLA605 3.1 39.2 1.0
C4C B:CLA605 3.1 35.4 1.0
C1B B:CLA605 3.1 34.0 1.0
C4B B:CLA605 3.1 38.4 1.0
C1D B:CLA605 3.2 39.0 1.0
C4A B:CLA605 3.2 39.8 1.0
C1A B:CLA605 3.3 39.1 1.0
CG B:HIS157 3.4 37.1 1.0
CHC B:CLA605 3.5 37.0 1.0
CHD B:CLA605 3.5 37.6 1.0
CHB B:CLA605 3.5 34.6 1.0
CHA B:CLA605 3.5 40.6 1.0
C8 B:STE619 3.8 45.5 1.0
CB B:HIS157 3.9 35.9 1.0
NE2 B:HIS157 4.1 38.7 1.0
C6 B:STE619 4.2 43.1 1.0
C3D B:CLA605 4.3 46.1 1.0
C2C B:CLA605 4.3 36.4 1.0
C3C B:CLA605 4.3 38.0 1.0
C2D B:CLA605 4.4 43.2 1.0
CD2 B:HIS157 4.4 35.5 1.0
C3B B:CLA605 4.4 37.0 1.0
C2B B:CLA605 4.4 37.9 1.0
C3A B:CLA605 4.5 36.4 1.0
C2A B:CLA605 4.6 33.5 1.0
C7 B:STE619 4.6 44.3 1.0
C9 B:STE619 5.0 43.4 1.0
CA B:HIS157 5.0 35.0 1.0
CBD B:CLA605 5.0 41.7 1.0

Magnesium binding site 10 out of 70 in 8f4k

Go back to Magnesium Binding Sites List in 8f4k
Magnesium binding site 10 out of 70 in the Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Rt Xfel Structure of the Three-Flash State of Photosystem II (3F, S0- Rich) at 2.16 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg606

b:29.4
occ:1.00
MG B:CLA606 0.0 29.4 1.0
ND B:CLA606 2.0 30.0 1.0
NB B:CLA606 2.1 27.1 1.0
NC B:CLA606 2.1 20.5 1.0
NA B:CLA606 2.1 26.8 1.0
O B:HOH831 2.2 30.6 1.0
C4D B:CLA606 2.9 30.4 1.0
C1B B:CLA606 3.1 25.8 1.0
C4A B:CLA606 3.1 30.0 1.0
C4B B:CLA606 3.1 27.4 1.0
C1C B:CLA606 3.1 26.3 1.0
C1D B:CLA606 3.1 30.2 1.0
C4C B:CLA606 3.1 28.8 1.0
C1A B:CLA606 3.2 31.7 1.0
CHA B:CLA606 3.4 29.6 1.0
CHC B:CLA606 3.5 27.7 1.0
CHB B:CLA606 3.5 29.9 1.0
CHD B:CLA606 3.5 31.4 1.0
C12 M:LMG101 3.7 38.3 1.0
C14 M:LMG101 3.9 33.3 1.0
C13 M:LMG101 4.2 32.8 1.0
C3D B:CLA606 4.2 35.7 1.0
O B:HOH752 4.2 29.9 1.0
C2D B:CLA606 4.3 35.2 1.0
C3B B:CLA606 4.4 27.4 1.0
C2B B:CLA606 4.4 30.7 1.0
C3C B:CLA606 4.4 28.2 1.0
C2C B:CLA606 4.4 26.8 1.0
SD B:MET37 4.4 33.1 1.0
C3A B:CLA606 4.4 29.5 1.0
C2A B:CLA606 4.5 32.1 1.0
CD2 B:PHE61 4.7 28.8 1.0
CBA B:CLA606 4.8 33.1 1.0
CE B:MET37 4.8 31.7 1.0
CBD B:CLA606 4.9 32.1 1.0
CB B:PHE61 4.9 30.3 1.0

Reference:

A.Bhowmick, R.Hussein, I.Bogacz, P.S.Simon, M.Ibrahim, R.Chatterjee, M.D.Doyle, M.H.Cheah, T.Fransson, P.Chernev, I.-S.Kim, H.Makita, M.Dasgupta, C.J.Kaminsky, M.Zhang, J.Gatcke, S.Haupt, I.I.Nangca, S.M.Keable, O.Aydin, K.Tono, S.Owada, L.B.Gee, F.D.Fuller, A.Batyuk, R.Alonso-Mori, J.M.Holton, D.W.Paley, N.W.Moriarty, F.Mamedov, P.D.Adams, A.S.Brewster, H.Dobbek, N.K.Sauter, U.Bergmann, A.Zouni, J.Messinger, J.Kern, J.Yano, V.K.Yachandra. Structural Evidence For Intermediates During O2 Formation in Photosystem II To Be Published.
Page generated: Fri Apr 7 09:40:55 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy