Magnesium in PDB 8f72: Phage P32 GP64- Rna Polymerase

The structure of Phage P32 GP64- Rna Polymerase, PDB code: 8f72 was solved by B.Bae, S.K.Nair, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.00 / 2.70
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	210.33, 106.32, 112.36, 90, 102.26, 90
R / Rfree (%)	20.5 / 25.7

The binding sites of Magnesium atom in the Phage P32 GP64- Rna Polymerase (pdb code 8f72). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Phage P32 GP64- Rna Polymerase, PDB code: 8f72:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Phage P32 GP64- Rna Polymerase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Phage P32 GP64- Rna Polymerase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg901 b:68.1 occ:1.00 OD1 A:ASP326 2.0 89.0 1.0 CG A:ASP326 2.7 97.2 1.0 OD2 A:ASP326 2.7 101.7 1.0 OD1 A:ASP330 2.7 87.4 1.0 OD2 A:ASP328 2.7 78.0 1.0 CG A:ASP330 3.5 75.3 1.0 OD2 A:ASP330 3.5 93.2 1.0 CG A:ASP328 3.6 88.6 1.0 OD1 A:ASP328 3.7 98.4 1.0 NH2 A:ARG288 4.1 67.6 1.0 CB A:ASP326 4.1 75.5 1.0 N A:ASP326 4.8 79.4 1.0 CA A:ASP326 4.8 76.5 1.0 CB A:ASP330 4.9 60.9 1.0 CB A:ASP328 5.0 83.2 1.0

Magnesium binding site 2 out of 2 in the Phage P32 GP64- Rna Polymerase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Phage P32 GP64- Rna Polymerase within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg901 b:71.4 occ:1.00 OD1 B:ASP326 2.4 104.1 1.0 O B:HOH1041 2.4 56.5 1.0 OD2 B:ASP328 2.5 84.8 1.0 OD2 B:ASP330 2.7 90.8 1.0 CG B:ASP328 3.3 101.5 1.0 OD1 B:ASP328 3.3 117.3 1.0 CG B:ASP326 3.4 108.2 1.0 CG B:ASP330 3.5 78.1 1.0 OD1 B:ASP330 3.5 90.5 1.0 OD2 B:ASP326 3.8 110.4 1.0 NH2 B:ARG288 4.1 79.8 1.0 N B:ASP326 4.5 98.3 1.0 CB B:ASP326 4.7 103.8 1.0 CB B:ASP328 4.7 89.6 1.0 CB B:ASP330 4.9 63.6 1.0 C B:ASP326 4.9 93.4 1.0 CA B:ASP326 4.9 97.8 1.0

B.Bae, S.K.Nair. Thermophage Rna Polymerase To Be Published.