Magnesium in PDB 8fbb: LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc

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>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 48;

Binding sites:

The binding sites of Magnesium atom in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc (pdb code 8fbb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 48 binding sites of Magnesium where determined in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc, PDB code: 8fbb:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ Q:Mg101 b:47.0 occ:1.00 MG Q:BCL101 0.0 47.0 1.0 ND Q:BCL101 2.0 41.9 1.0 NB Q:BCL101 2.1 47.7 1.0 NC Q:BCL101 2.1 42.9 1.0 NA Q:BCL101 2.1 52.4 1.0 C4D Q:BCL101 2.9 47.1 1.0 C1B Q:BCL101 3.1 50.1 1.0 C4B Q:BCL101 3.1 48.6 1.0 C1C Q:BCL101 3.1 45.6 1.0 C1D Q:BCL101 3.1 45.9 1.0 C4C Q:BCL101 3.1 45.6 1.0 C4A Q:BCL101 3.1 54.7 1.0 C1A Q:BCL101 3.1 56.9 1.0 CHA Q:BCL101 3.4 50.8 1.0 CHC Q:BCL101 3.4 45.2 1.0 CHB Q:BCL101 3.5 49.6 1.0 CHD Q:BCL101 3.5 43.2 1.0 C3D Q:BCL101 4.2 46.7 1.0 C2B Q:BCL101 4.3 51.7 1.0 C3B Q:BCL101 4.3 53.5 1.0 CB Q:ASP6 4.3 58.7 1.0 C2D Q:BCL101 4.3 45.8 1.0 C2C Q:BCL101 4.4 51.2 1.0 C3C Q:BCL101 4.4 53.0 1.0 C2A Q:BCL101 4.4 64.4 1.0 C3A Q:BCL101 4.4 60.5 1.0 CB Q:PRO3 4.8 81.3 1.0 CBD Q:BCL101 4.9 53.3 1.0

Magnesium binding site 2 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ Q:Mg102 b:30.1 occ:1.00 MG Q:BCL102 0.0 30.1 1.0 ND Q:BCL102 2.0 31.4 1.0 NB Q:BCL102 2.1 30.8 1.0 NC Q:BCL102 2.1 29.4 1.0 NA Q:BCL102 2.2 30.9 1.0 C4D Q:BCL102 3.0 32.2 1.0 C4B Q:BCL102 3.1 35.0 1.0 C1D Q:BCL102 3.1 33.3 1.0 C1B Q:BCL102 3.1 33.9 1.0 C1C Q:BCL102 3.1 30.9 1.0 C4C Q:BCL102 3.1 32.0 1.0 C4A Q:BCL102 3.2 28.9 1.0 C1A Q:BCL102 3.2 28.0 1.0 CHC Q:BCL102 3.4 33.1 1.0 CHD Q:BCL102 3.5 30.8 1.0 CHA Q:BCL102 3.5 31.3 1.0 CHB Q:BCL102 3.5 31.8 1.0 C3D Q:BCL102 4.2 33.1 1.0 C2D Q:BCL102 4.3 32.5 1.0 C2B Q:BCL102 4.3 29.4 1.0 C3B Q:BCL102 4.3 38.8 1.0 C2C Q:BCL102 4.4 32.2 1.0 C3C Q:BCL102 4.4 31.9 1.0 C3A Q:BCL102 4.5 25.3 1.0 C2A Q:BCL102 4.5 27.7 1.0 C2B T:BCL101 4.7 28.5 1.0 CBD Q:BCL102 5.0 33.9 1.0

Magnesium binding site 3 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ R:Mg101 b:29.4 occ:1.00 MG R:BCL101 0.0 29.4 1.0 NB R:BCL101 2.0 27.2 1.0 ND R:BCL101 2.0 31.5 1.0 NA R:BCL101 2.1 28.7 1.0 NC R:BCL101 2.2 33.4 1.0 C4D R:BCL101 3.0 30.8 1.0 C1B R:BCL101 3.0 29.8 1.0 C4B R:BCL101 3.0 31.3 1.0 C4A R:BCL101 3.1 28.4 1.0 C1D R:BCL101 3.1 32.3 1.0 C1A R:BCL101 3.2 25.0 1.0 C1C R:BCL101 3.2 30.9 1.0 C4C R:BCL101 3.2 30.3 1.0 CHB R:BCL101 3.4 29.4 1.0 CHC R:BCL101 3.5 32.0 1.0 CHA R:BCL101 3.5 28.5 1.0 CHD R:BCL101 3.5 29.9 1.0 C2B R:BCL101 4.2 28.5 1.0 C3D R:BCL101 4.2 33.0 1.0 C3B R:BCL101 4.3 36.9 1.0 C2D R:BCL101 4.3 31.7 1.0 C3A R:BCL101 4.4 26.8 1.0 C2A R:BCL101 4.5 27.4 1.0 C2C R:BCL101 4.5 31.0 1.0 C3C R:BCL101 4.5 32.8 1.0 CBD R:BCL101 5.0 34.7 1.0

Magnesium binding site 4 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ S:Mg102 b:47.0 occ:1.00 MG S:BCL102 0.0 47.0 1.0 ND S:BCL102 2.0 41.9 1.0 NB S:BCL102 2.1 47.7 1.0 NC S:BCL102 2.1 42.9 1.0 NA S:BCL102 2.1 52.4 1.0 C4D S:BCL102 2.9 47.1 1.0 C1B S:BCL102 3.1 50.1 1.0 C4B S:BCL102 3.1 48.6 1.0 C1C S:BCL102 3.1 45.6 1.0 C1D S:BCL102 3.1 45.9 1.0 C4C S:BCL102 3.1 45.6 1.0 C4A S:BCL102 3.1 54.7 1.0 C1A S:BCL102 3.1 56.9 1.0 CHA S:BCL102 3.4 50.8 1.0 CHC S:BCL102 3.4 45.2 1.0 CHB S:BCL102 3.5 49.6 1.0 CHD S:BCL102 3.5 43.2 1.0 C3D S:BCL102 4.2 46.7 1.0 C2B S:BCL102 4.3 51.7 1.0 C3B S:BCL102 4.3 53.5 1.0 CB S:ASP6 4.3 58.7 1.0 C2D S:BCL102 4.3 45.8 1.0 C2C S:BCL102 4.4 51.2 1.0 C3C S:BCL102 4.4 53.0 1.0 C2A S:BCL102 4.4 64.4 1.0 C3A S:BCL102 4.4 60.5 1.0 CB S:PRO3 4.8 81.3 1.0 CBD S:BCL102 4.9 53.3 1.0

Magnesium binding site 5 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ S:Mg103 b:30.1 occ:1.00 MG S:BCL103 0.0 30.1 1.0 ND S:BCL103 2.0 31.4 1.0 NB S:BCL103 2.1 30.8 1.0 NC S:BCL103 2.1 29.4 1.0 NA S:BCL103 2.2 30.9 1.0 C4D S:BCL103 3.0 32.2 1.0 C4B S:BCL103 3.1 35.0 1.0 C1D S:BCL103 3.1 33.3 1.0 C1B S:BCL103 3.1 33.9 1.0 C1C S:BCL103 3.1 30.9 1.0 C4C S:BCL103 3.1 32.0 1.0 C4A S:BCL103 3.2 28.9 1.0 C1A S:BCL103 3.2 28.0 1.0 CHC S:BCL103 3.4 33.1 1.0 CHD S:BCL103 3.5 30.8 1.0 CHA S:BCL103 3.5 31.3 1.0 CHB S:BCL103 3.5 31.8 1.0 C3D S:BCL103 4.2 33.1 1.0 C2D S:BCL103 4.3 32.5 1.0 C2B S:BCL103 4.3 29.4 1.0 C3B S:BCL103 4.3 38.8 1.0 C2C S:BCL103 4.4 32.2 1.0 C3C S:BCL103 4.4 31.9 1.0 C3A S:BCL103 4.5 25.3 1.0 C2A S:BCL103 4.5 27.7 1.0 C2B V:BCL101 4.9 28.5 1.0 CBD S:BCL103 5.0 33.9 1.0

Magnesium binding site 6 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ T:Mg101 b:29.4 occ:1.00 MG T:BCL101 0.0 29.4 1.0 NB T:BCL101 2.0 27.2 1.0 ND T:BCL101 2.0 31.5 1.0 NA T:BCL101 2.1 28.7 1.0 NC T:BCL101 2.2 33.4 1.0 C4D T:BCL101 3.0 30.8 1.0 C1B T:BCL101 3.0 29.8 1.0 C4B T:BCL101 3.0 31.3 1.0 C4A T:BCL101 3.1 28.4 1.0 C1D T:BCL101 3.1 32.3 1.0 C1A T:BCL101 3.2 25.0 1.0 C1C T:BCL101 3.2 30.9 1.0 C4C T:BCL101 3.2 30.3 1.0 CHB T:BCL101 3.4 29.4 1.0 CHC T:BCL101 3.5 32.0 1.0 CHA T:BCL101 3.5 28.5 1.0 CHD T:BCL101 3.5 29.9 1.0 C2B T:BCL101 4.2 28.5 1.0 C3D T:BCL101 4.2 33.0 1.0 C3B T:BCL101 4.3 36.9 1.0 C2D T:BCL101 4.3 31.7 1.0 C3A T:BCL101 4.4 26.8 1.0 C2A T:BCL101 4.5 27.4 1.0 C2C T:BCL101 4.5 31.0 1.0 C3C T:BCL101 4.5 32.8 1.0 CBD T:BCL101 5.0 34.7 1.0

Magnesium binding site 7 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ U:Mg102 b:47.0 occ:1.00 MG U:BCL102 0.0 47.0 1.0 ND U:BCL102 2.0 41.9 1.0 NB U:BCL102 2.1 47.7 1.0 NC U:BCL102 2.1 42.9 1.0 NA U:BCL102 2.1 52.4 1.0 C4D U:BCL102 2.9 47.1 1.0 C1B U:BCL102 3.1 50.1 1.0 C4B U:BCL102 3.1 48.6 1.0 C1C U:BCL102 3.1 45.6 1.0 C1D U:BCL102 3.1 45.9 1.0 C4C U:BCL102 3.1 45.6 1.0 C4A U:BCL102 3.1 54.7 1.0 C1A U:BCL102 3.1 56.9 1.0 CHA U:BCL102 3.4 50.8 1.0 CHC U:BCL102 3.4 45.2 1.0 CHB U:BCL102 3.5 49.6 1.0 CHD U:BCL102 3.5 43.2 1.0 C3D U:BCL102 4.2 46.7 1.0 C2B U:BCL102 4.3 51.7 1.0 C3B U:BCL102 4.3 53.5 1.0 CB U:ASP6 4.3 58.7 1.0 C2D U:BCL102 4.3 45.8 1.0 C2C U:BCL102 4.4 51.2 1.0 C3C U:BCL102 4.4 53.0 1.0 C2A U:BCL102 4.4 64.4 1.0 C3A U:BCL102 4.4 60.5 1.0 CB U:PRO3 4.8 81.3 1.0 CBD U:BCL102 4.9 53.3 1.0

Magnesium binding site 8 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ U:Mg103 b:30.1 occ:1.00 MG U:BCL103 0.0 30.1 1.0 ND U:BCL103 2.0 31.4 1.0 NB U:BCL103 2.1 30.8 1.0 NC U:BCL103 2.1 29.4 1.0 NA U:BCL103 2.2 30.9 1.0 C4D U:BCL103 3.0 32.2 1.0 C4B U:BCL103 3.1 35.0 1.0 C1D U:BCL103 3.1 33.3 1.0 C1B U:BCL103 3.1 33.9 1.0 C1C U:BCL103 3.1 30.9 1.0 C4C U:BCL103 3.1 32.0 1.0 C4A U:BCL103 3.2 28.9 1.0 C1A U:BCL103 3.2 28.0 1.0 CHC U:BCL103 3.4 33.1 1.0 CHD U:BCL103 3.5 30.8 1.0 CHA U:BCL103 3.5 31.3 1.0 CHB U:BCL103 3.5 31.8 1.0 C3D U:BCL103 4.2 33.1 1.0 C2D U:BCL103 4.3 32.5 1.0 C2B U:BCL103 4.3 29.4 1.0 C3B U:BCL103 4.3 38.8 1.0 C2C U:BCL103 4.4 32.2 1.0 C3C U:BCL103 4.4 31.9 1.0 C3A U:BCL103 4.5 25.3 1.0 C2A U:BCL103 4.5 27.7 1.0 C2B X:BCL101 4.7 28.5 1.0 CBD U:BCL103 5.0 33.9 1.0

Magnesium binding site 9 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ V:Mg101 b:29.4 occ:1.00 MG V:BCL101 0.0 29.4 1.0 NB V:BCL101 2.0 27.2 1.0 ND V:BCL101 2.0 31.5 1.0 NA V:BCL101 2.1 28.7 1.0 NC V:BCL101 2.2 33.4 1.0 C4D V:BCL101 3.0 30.8 1.0 C1B V:BCL101 3.0 29.8 1.0 C4B V:BCL101 3.0 31.3 1.0 C4A V:BCL101 3.1 28.4 1.0 C1D V:BCL101 3.1 32.3 1.0 C1A V:BCL101 3.2 25.0 1.0 C1C V:BCL101 3.2 30.9 1.0 C4C V:BCL101 3.2 30.3 1.0 CHB V:BCL101 3.4 29.4 1.0 CHC V:BCL101 3.5 32.0 1.0 CHA V:BCL101 3.5 28.5 1.0 CHD V:BCL101 3.5 29.9 1.0 C2B V:BCL101 4.2 28.5 1.0 C3D V:BCL101 4.2 33.0 1.0 C3B V:BCL101 4.3 36.9 1.0 C2D V:BCL101 4.3 31.7 1.0 C3A V:BCL101 4.4 26.8 1.0 C2A V:BCL101 4.5 27.4 1.0 C2C V:BCL101 4.5 31.0 1.0 C3C V:BCL101 4.5 32.8 1.0 CBD V:BCL101 5.0 34.7 1.0

Magnesium binding site 10 out of 48 in the LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of LH2-LH3 Antenna in Parallel Configuration Embedded in A Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ W:Mg102 b:47.0 occ:1.00 MG W:BCL102 0.0 47.0 1.0 ND W:BCL102 2.0 41.9 1.0 NB W:BCL102 2.1 47.7 1.0 NC W:BCL102 2.1 42.9 1.0 NA W:BCL102 2.1 52.4 1.0 C4D W:BCL102 2.9 47.1 1.0 C1B W:BCL102 3.1 50.1 1.0 C4B W:BCL102 3.1 48.6 1.0 C1C W:BCL102 3.1 45.6 1.0 C1D W:BCL102 3.1 45.9 1.0 C4C W:BCL102 3.1 45.6 1.0 C4A W:BCL102 3.1 54.7 1.0 C1A W:BCL102 3.1 56.9 1.0 CHA W:BCL102 3.4 50.8 1.0 CHC W:BCL102 3.4 45.2 1.0 CHB W:BCL102 3.5 49.6 1.0 CHD W:BCL102 3.5 43.2 1.0 C3D W:BCL102 4.2 46.7 1.0 C2B W:BCL102 4.3 51.7 1.0 C3B W:BCL102 4.3 53.5 1.0 C2D W:BCL102 4.3 45.8 1.0 CB W:ASP6 4.3 58.7 1.0 C2C W:BCL102 4.4 51.2 1.0 C3C W:BCL102 4.4 53.0 1.0 C2A W:BCL102 4.4 64.4 1.0 C3A W:BCL102 4.4 60.5 1.0 CB W:PRO3 4.8 81.3 1.0 CBD W:BCL102 4.9 53.3 1.0

D.Wang, O.C.Fiebig, D.Harris, H.Toporik, Y.Ji, C.Chuang, M.Nairat, A.L.Tong, J.I.Ogren, S.M.Hart, J.Cao, J.N.Sturgis, Y.Mazor, G.S.Schlau-Cohen. Elucidating Interprotein Energy Transfer Dynamics Within the Antenna Network From Purple Bacteria. Proc.Natl.Acad.Sci.Usa V. 120 77120 2023.
ISSN: ESSN 1091-6490
PubMed: 37399405
DOI: 10.1073/PNAS.2220477120