Magnesium in PDB 8fhk: BMRCD_OC-Atp

The binding sites of Magnesium atom in the BMRCD_OC-Atp (pdb code 8fhk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the BMRCD_OC-Atp, PDB code: 8fhk:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the BMRCD_OC-Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of BMRCD_OC-Atp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg713 b:30.0 occ:1.00 O3G D:ATP701 2.2 65.6 1.0 O2B D:ATP701 2.3 65.6 1.0 O2G D:ATP701 2.4 65.6 1.0 HE22 D:GLN511 2.4 64.9 1.0 PG D:ATP701 2.5 65.6 1.0 O3B D:ATP701 2.7 65.6 1.0 HB2 C:SER476 2.8 65.7 1.0 PB D:ATP701 2.9 65.6 1.0 HG D:SER470 2.9 66.0 1.0 OE1 D:GLN511 3.0 64.9 1.0 H C:GLY477 3.0 64.6 1.0 NE2 D:GLN511 3.2 64.9 1.0 O3A D:ATP701 3.3 65.6 1.0 OG D:SER470 3.3 66.0 1.0 CD D:GLN511 3.5 64.9 1.0 HE22 D:GLN592 3.6 67.3 1.0 N C:GLY477 3.8 64.6 1.0 CB C:SER476 3.9 65.7 1.0 O1G D:ATP701 4.0 65.6 1.0 HZ1 D:LYS469 4.0 68.7 1.0 HE2 D:LYS469 4.0 68.7 1.0 H D:SER470 4.0 66.0 1.0 HB2 D:SER470 4.1 66.0 1.0 H C:GLY478 4.1 68.5 1.0 HE21 D:GLN511 4.2 64.9 1.0 HA C:SER476 4.2 65.7 1.0 HB2 D:LYS469 4.2 68.7 1.0 PA D:ATP701 4.3 65.6 1.0 HA3 C:GLY477 4.3 64.6 1.0 CB D:SER470 4.3 66.0 1.0 O1B D:ATP701 4.3 65.6 1.0 HB3 C:SER476 4.3 65.7 1.0 HZ3 D:LYS469 4.4 68.7 1.0 NE2 D:GLN592 4.4 67.3 1.0 CA C:SER476 4.4 65.7 1.0 O1A D:ATP701 4.5 65.6 1.0 O2A D:ATP701 4.5 65.6 1.0 CA C:GLY477 4.6 64.6 1.0 C C:SER476 4.6 65.7 1.0 NZ D:LYS469 4.6 68.7 1.0 OG C:SER476 4.6 65.7 1.0 HG C:SER476 4.6 65.7 1.0 HE21 D:GLN592 4.7 67.3 1.0 CE D:LYS469 4.8 68.7 1.0 N D:SER470 4.8 66.0 1.0 N C:GLY478 4.8 68.5 1.0 O D:THR465 4.9 70.0 1.0 CG D:GLN511 5.0 64.9 1.0

Magnesium binding site 2 out of 2 in the BMRCD_OC-Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of BMRCD_OC-Atp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg607 b:30.0 occ:1.00 O2B C:ATP601 2.2 67.0 1.0 O2G C:ATP601 2.2 67.0 1.0 O3B C:ATP601 2.5 67.0 1.0 PG C:ATP601 2.7 67.0 1.0 HG1 C:THR378 2.7 68.0 1.0 PB C:ATP601 2.8 67.0 1.0 HE22 C:GLN419 2.9 67.2 1.0 O3A C:ATP601 3.2 67.0 1.0 OG1 C:THR378 3.2 68.0 1.0 OE1 C:GLN419 3.4 67.2 1.0 NE2 C:GLN419 3.4 67.2 1.0 HB2 D:SER568 3.7 65.3 1.0 O3G C:ATP601 3.7 67.0 1.0 CD C:GLN419 3.7 67.2 1.0 O1G C:ATP601 3.7 67.0 1.0 HG2 C:LYS377 3.8 71.3 1.0 HE22 C:GLN500 3.8 72.4 1.0 HB C:THR378 3.8 68.0 1.0 HG3 C:LYS377 3.9 71.3 1.0 O1A C:ATP601 3.9 67.0 1.0 HD2 C:LYS377 3.9 71.3 1.0 HZ3 C:LYS377 4.0 71.3 1.0 CB C:THR378 4.1 68.0 1.0 H C:THR378 4.1 68.0 1.0 PA C:ATP601 4.1 67.0 1.0 HE21 C:GLN419 4.2 67.2 1.0 O1B C:ATP601 4.2 67.0 1.0 HZ2 C:LYS377 4.3 71.3 1.0 CG C:LYS377 4.3 71.3 1.0 NE2 C:GLN500 4.3 72.4 1.0 OE1 C:GLN500 4.4 72.4 1.0 O2A C:ATP601 4.5 67.0 1.0 CD C:GLN500 4.6 72.4 1.0 CD C:LYS377 4.6 71.3 1.0 H D:SER569 4.6 66.3 1.0 HG21 C:THR378 4.6 68.0 1.0 NZ C:LYS377 4.6 71.3 1.0 CB D:SER568 4.7 65.3 1.0 OD1 C:ASP499 4.7 71.6 1.0 N C:THR378 4.8 68.0 1.0 HB3 D:SER568 4.8 65.3 1.0 HB2 D:SER569 4.9 66.3 1.0 HE21 C:GLN500 4.9 72.4 1.0 H D:GLY570 5.0 65.9 1.0 CG2 C:THR378 5.0 68.0 1.0

Q.Tang, M.Sinclair, H.S.Hasdemir, R.A.Stein, E.Karakas, E.Tajkhorshid, H.S.Mchaourab. Asymmetric Conformations and Lipid Interactions Shape the Atp-Coupled Cycle of A Heterodimeric Abc Transporter. Nat Commun V. 14 7184 2023.
ISSN: ESSN 2041-1723
PubMed: 37938578
DOI: 10.1038/S41467-023-42937-5