Magnesium in PDB 8g7l: Atp-Bound MTHSP60 V72I

All present enzymatic activity of Atp-Bound MTHSP60 V72I:
5.6.1.7;

The structure of Atp-Bound MTHSP60 V72I also contains other interesting chemical elements:

Potassium

(K)

14 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Magnesium atom in the Atp-Bound MTHSP60 V72I (pdb code 8g7l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 14 binding sites of Magnesium where determined in the Atp-Bound MTHSP60 V72I, PDB code: 8g7l:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:20.2 occ:1.00 OD1 A:ASP85 2.4 24.8 1.0 O2G A:ATP601 2.4 24.1 1.0 O1A A:ATP601 2.5 24.1 1.0 O1B A:ATP601 2.9 24.1 1.0 CG A:ASP85 3.2 24.8 1.0 OD2 A:ASP85 3.3 24.8 1.0 PB A:ATP601 3.7 24.1 1.0 PG A:ATP601 3.7 24.1 1.0 PA A:ATP601 3.7 24.1 1.0 O3B A:ATP601 3.8 24.1 1.0 O3A A:ATP601 3.9 24.1 1.0 O A:SER149 4.3 32.5 1.0 O3G A:ATP601 4.3 24.1 1.0 OD2 A:ASP397 4.5 32.0 1.0 N A:GLY86 4.5 21.5 1.0 C5' A:ATP601 4.6 24.1 1.0 CB A:ASP85 4.6 24.8 1.0 O5' A:ATP601 4.6 24.1 1.0 CB A:ASP397 4.7 32.0 1.0 CG A:ASP397 4.7 32.0 1.0 O2A A:ATP601 4.9 24.1 1.0 O1G A:ATP601 4.9 24.1 1.0 CA A:SER149 4.9 32.5 1.0

Magnesium binding site 2 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg602 b:20.2 occ:1.00 OD1 G:ASP85 2.4 24.8 1.0 O2G G:ATP601 2.4 24.1 1.0 O1A G:ATP601 2.5 24.1 1.0 O1B G:ATP601 2.9 24.1 1.0 CG G:ASP85 3.2 24.8 1.0 OD2 G:ASP85 3.3 24.8 1.0 PB G:ATP601 3.7 24.1 1.0 PG G:ATP601 3.7 24.1 1.0 PA G:ATP601 3.7 24.1 1.0 O3B G:ATP601 3.8 24.1 1.0 O3A G:ATP601 3.9 24.1 1.0 O G:SER149 4.3 32.5 1.0 O3G G:ATP601 4.3 24.1 1.0 OD2 G:ASP397 4.5 32.0 1.0 N G:GLY86 4.5 21.5 1.0 C5' G:ATP601 4.6 24.1 1.0 CB G:ASP85 4.6 24.8 1.0 O5' G:ATP601 4.6 24.1 1.0 CB G:ASP397 4.7 32.0 1.0 CG G:ASP397 4.7 32.0 1.0 O2A G:ATP601 4.9 24.1 1.0 O1G G:ATP601 4.9 24.1 1.0 CA G:SER149 4.9 32.5 1.0

Magnesium binding site 3 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg602 b:20.2 occ:1.00 OD1 F:ASP85 2.4 24.8 1.0 O2G F:ATP601 2.4 24.1 1.0 O1A F:ATP601 2.5 24.1 1.0 O1B F:ATP601 2.9 24.1 1.0 CG F:ASP85 3.2 24.8 1.0 OD2 F:ASP85 3.3 24.8 1.0 PB F:ATP601 3.7 24.1 1.0 PG F:ATP601 3.7 24.1 1.0 PA F:ATP601 3.7 24.1 1.0 O3B F:ATP601 3.8 24.1 1.0 O3A F:ATP601 3.9 24.1 1.0 O F:SER149 4.3 32.5 1.0 O3G F:ATP601 4.3 24.1 1.0 OD2 F:ASP397 4.5 32.0 1.0 N F:GLY86 4.5 21.5 1.0 C5' F:ATP601 4.6 24.1 1.0 CB F:ASP85 4.6 24.8 1.0 O5' F:ATP601 4.6 24.1 1.0 CB F:ASP397 4.7 32.0 1.0 CG F:ASP397 4.7 32.0 1.0 O2A F:ATP601 4.9 24.1 1.0 O1G F:ATP601 4.9 24.1 1.0 CA F:SER149 4.9 32.5 1.0

Magnesium binding site 4 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg602 b:20.2 occ:1.00 OD1 E:ASP85 2.4 24.8 1.0 O2G E:ATP601 2.4 24.1 1.0 O1A E:ATP601 2.5 24.1 1.0 O1B E:ATP601 2.9 24.1 1.0 CG E:ASP85 3.2 24.8 1.0 OD2 E:ASP85 3.3 24.8 1.0 PB E:ATP601 3.7 24.1 1.0 PG E:ATP601 3.7 24.1 1.0 PA E:ATP601 3.7 24.1 1.0 O3B E:ATP601 3.8 24.1 1.0 O3A E:ATP601 3.9 24.1 1.0 O E:SER149 4.3 32.5 1.0 O3G E:ATP601 4.3 24.1 1.0 OD2 E:ASP397 4.5 32.0 1.0 N E:GLY86 4.5 21.5 1.0 C5' E:ATP601 4.6 24.1 1.0 CB E:ASP85 4.6 24.8 1.0 O5' E:ATP601 4.6 24.1 1.0 CB E:ASP397 4.7 32.0 1.0 CG E:ASP397 4.7 32.0 1.0 O2A E:ATP601 4.9 24.1 1.0 O1G E:ATP601 4.9 24.1 1.0 CA E:SER149 4.9 32.5 1.0

Magnesium binding site 5 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg602 b:20.2 occ:1.00 OD1 D:ASP85 2.4 24.8 1.0 O2G D:ATP601 2.4 24.1 1.0 O1A D:ATP601 2.5 24.1 1.0 O1B D:ATP601 2.9 24.1 1.0 CG D:ASP85 3.2 24.8 1.0 OD2 D:ASP85 3.3 24.8 1.0 PB D:ATP601 3.7 24.1 1.0 PG D:ATP601 3.7 24.1 1.0 PA D:ATP601 3.7 24.1 1.0 O3B D:ATP601 3.8 24.1 1.0 O3A D:ATP601 3.9 24.1 1.0 O D:SER149 4.3 32.5 1.0 O3G D:ATP601 4.3 24.1 1.0 OD2 D:ASP397 4.5 32.0 1.0 N D:GLY86 4.5 21.5 1.0 C5' D:ATP601 4.6 24.1 1.0 CB D:ASP85 4.6 24.8 1.0 O5' D:ATP601 4.6 24.1 1.0 CB D:ASP397 4.7 32.0 1.0 CG D:ASP397 4.7 32.0 1.0 O2A D:ATP601 4.9 24.1 1.0 O1G D:ATP601 4.9 24.1 1.0 CA D:SER149 4.9 32.5 1.0

Magnesium binding site 6 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg602 b:20.2 occ:1.00 OD1 C:ASP85 2.4 24.8 1.0 O2G C:ATP601 2.4 24.1 1.0 O1A C:ATP601 2.5 24.1 1.0 O1B C:ATP601 2.9 24.1 1.0 CG C:ASP85 3.2 24.8 1.0 OD2 C:ASP85 3.3 24.8 1.0 PB C:ATP601 3.7 24.1 1.0 PG C:ATP601 3.7 24.1 1.0 PA C:ATP601 3.7 24.1 1.0 O3B C:ATP601 3.8 24.1 1.0 O3A C:ATP601 3.9 24.1 1.0 O C:SER149 4.3 32.5 1.0 O3G C:ATP601 4.3 24.1 1.0 OD2 C:ASP397 4.5 32.0 1.0 N C:GLY86 4.5 21.5 1.0 C5' C:ATP601 4.6 24.1 1.0 CB C:ASP85 4.6 24.8 1.0 O5' C:ATP601 4.6 24.1 1.0 CB C:ASP397 4.7 32.0 1.0 CG C:ASP397 4.7 32.0 1.0 O2A C:ATP601 4.9 24.1 1.0 O1G C:ATP601 4.9 24.1 1.0 CA C:SER149 4.9 32.5 1.0

Magnesium binding site 7 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg602 b:20.2 occ:1.00 OD1 B:ASP85 2.4 24.8 1.0 O2G B:ATP601 2.4 24.1 1.0 O1A B:ATP601 2.5 24.1 1.0 O1B B:ATP601 2.9 24.1 1.0 CG B:ASP85 3.2 24.8 1.0 OD2 B:ASP85 3.3 24.8 1.0 PB B:ATP601 3.7 24.1 1.0 PG B:ATP601 3.7 24.1 1.0 PA B:ATP601 3.7 24.1 1.0 O3B B:ATP601 3.8 24.1 1.0 O3A B:ATP601 3.9 24.1 1.0 O B:SER149 4.3 32.5 1.0 O3G B:ATP601 4.3 24.1 1.0 OD2 B:ASP397 4.5 32.0 1.0 N B:GLY86 4.5 21.5 1.0 C5' B:ATP601 4.6 24.1 1.0 CB B:ASP85 4.6 24.8 1.0 O5' B:ATP601 4.6 24.1 1.0 CB B:ASP397 4.7 32.0 1.0 CG B:ASP397 4.7 32.0 1.0 O2A B:ATP601 4.9 24.1 1.0 O1G B:ATP601 4.9 24.1 1.0 CA B:SER149 4.9 32.5 1.0

Magnesium binding site 8 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ K:Mg602 b:20.2 occ:1.00 OD1 K:ASP85 2.4 24.8 1.0 O2G K:ATP601 2.4 24.1 1.0 O1A K:ATP601 2.5 24.1 1.0 O1B K:ATP601 2.9 24.1 1.0 CG K:ASP85 3.2 24.8 1.0 OD2 K:ASP85 3.3 24.8 1.0 PB K:ATP601 3.7 24.1 1.0 PG K:ATP601 3.7 24.1 1.0 PA K:ATP601 3.7 24.1 1.0 O3B K:ATP601 3.8 24.1 1.0 O3A K:ATP601 3.9 24.1 1.0 O K:SER149 4.3 32.5 1.0 O3G K:ATP601 4.3 24.1 1.0 OD2 K:ASP397 4.5 32.0 1.0 N K:GLY86 4.5 21.5 1.0 C5' K:ATP601 4.6 24.1 1.0 CB K:ASP85 4.6 24.8 1.0 O5' K:ATP601 4.6 24.1 1.0 CB K:ASP397 4.7 32.0 1.0 CG K:ASP397 4.7 32.0 1.0 O2A K:ATP601 4.9 24.1 1.0 O1G K:ATP601 4.9 24.1 1.0 CA K:SER149 4.9 32.5 1.0

Magnesium binding site 9 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ J:Mg602 b:20.2 occ:1.00 OD1 J:ASP85 2.4 24.8 1.0 O2G J:ATP601 2.4 24.1 1.0 O1A J:ATP601 2.5 24.1 1.0 O1B J:ATP601 2.9 24.1 1.0 CG J:ASP85 3.2 24.8 1.0 OD2 J:ASP85 3.3 24.8 1.0 PB J:ATP601 3.7 24.1 1.0 PG J:ATP601 3.7 24.1 1.0 PA J:ATP601 3.7 24.1 1.0 O3B J:ATP601 3.8 24.1 1.0 O3A J:ATP601 3.9 24.1 1.0 O J:SER149 4.3 32.5 1.0 O3G J:ATP601 4.3 24.1 1.0 OD2 J:ASP397 4.5 32.0 1.0 N J:GLY86 4.5 21.5 1.0 C5' J:ATP601 4.6 24.1 1.0 CB J:ASP85 4.6 24.8 1.0 O5' J:ATP601 4.6 24.1 1.0 CB J:ASP397 4.7 32.0 1.0 CG J:ASP397 4.7 32.0 1.0 O2A J:ATP601 4.9 24.1 1.0 O1G J:ATP601 4.9 24.1 1.0 CA J:SER149 4.9 32.5 1.0

Magnesium binding site 10 out of 14 in the Atp-Bound MTHSP60 V72I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Atp-Bound MTHSP60 V72I within 5.0Å range: probe atom residue distance (Å) B Occ I:Mg602 b:20.2 occ:1.00 OD1 I:ASP85 2.4 24.8 1.0 O2G I:ATP601 2.4 24.1 1.0 O1A I:ATP601 2.5 24.1 1.0 O1B I:ATP601 2.9 24.1 1.0 CG I:ASP85 3.2 24.8 1.0 OD2 I:ASP85 3.3 24.8 1.0 PB I:ATP601 3.7 24.1 1.0 PG I:ATP601 3.7 24.1 1.0 PA I:ATP601 3.7 24.1 1.0 O3B I:ATP601 3.8 24.1 1.0 O3A I:ATP601 3.9 24.1 1.0 O I:SER149 4.3 32.5 1.0 O3G I:ATP601 4.3 24.1 1.0 OD2 I:ASP397 4.5 32.0 1.0 N I:GLY86 4.5 21.5 1.0 C5' I:ATP601 4.6 24.1 1.0 CB I:ASP85 4.6 24.8 1.0 O5' I:ATP601 4.6 24.1 1.0 CB I:ASP397 4.7 32.0 1.0 CG I:ASP397 4.7 32.0 1.0 O2A I:ATP601 4.9 24.1 1.0 O1G I:ATP601 4.9 24.1 1.0 CA I:SER149 4.9 32.5 1.0

J.R.Braxton, H.Shao, E.Tse, J.E.Gestwicki, D.R.Southworth. Asymmetric Apical Domain States of Mitochondrial HSP60 Coordinate Substrate Engagement and Chaperonin Assembly. Biorxiv 2023.
ISSN: ISSN 2692-8205
PubMed: 37293102
DOI: 10.1101/2023.05.15.540872