Magnesium in PDB 8g9u: Exploiting Activation and Inactivation Mechanisms in Type I-C Crispr- CAS3 For Genome Editing Applications

The binding sites of Magnesium atom in the Exploiting Activation and Inactivation Mechanisms in Type I-C Crispr- CAS3 For Genome Editing Applications (pdb code 8g9u). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Exploiting Activation and Inactivation Mechanisms in Type I-C Crispr- CAS3 For Genome Editing Applications, PDB code: 8g9u:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Exploiting Activation and Inactivation Mechanisms in Type I-C Crispr- CAS3 For Genome Editing Applications


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Exploiting Activation and Inactivation Mechanisms in Type I-C Crispr- CAS3 For Genome Editing Applications within 5.0Å range: probe atom residue distance (Å) B Occ P:Mg801 b:30.0 occ:1.00 CE1 P:HIS119 1.7 66.2 1.0 NE2 P:HIS119 2.2 66.2 1.0 OD2 P:ASP53 2.3 71.8 1.0 OD1 P:ASP53 2.3 71.8 1.0 MG P:MG802 2.3 30.0 1.0 NE2 P:HIS118 2.6 64.8 1.0 O1 P:PO4804 2.6 30.0 1.0 CG P:ASP53 2.6 71.8 1.0 ND1 P:HIS119 2.8 66.2 1.0 CD2 P:HIS118 3.0 64.8 1.0 OD1 P:ASP198 3.0 73.2 1.0 NZ P:LYS56 3.1 77.1 1.0 NE2 P:HIS91 3.3 71.7 1.0 CD2 P:HIS119 3.3 66.2 1.0 OD2 P:ASP198 3.4 73.2 1.0 CG P:ASP198 3.4 73.2 1.0 CG P:HIS119 3.7 66.2 1.0 CE1 P:HIS118 3.8 64.8 1.0 CD2 P:HIS52 3.9 72.0 1.0 P P:PO4804 4.0 30.0 1.0 CB P:ASP53 4.1 71.8 1.0 CE1 P:HIS91 4.2 71.7 1.0 CE P:LYS56 4.2 77.1 1.0 CG P:HIS118 4.3 64.8 1.0 CD2 P:HIS91 4.3 71.7 1.0 NE2 P:HIS52 4.4 72.0 1.0 O3 P:PO4804 4.5 30.0 1.0 ND1 P:HIS118 4.6 64.8 1.0 O4 P:PO4804 4.7 30.0 1.0 CB P:ASP198 4.7 73.2 1.0 NE2 P:HIS25 4.8 81.6 1.0 CA P:ASP53 4.9 71.8 1.0 O P:HIS52 4.9 72.0 1.0

Magnesium binding site 2 out of 2 in the Exploiting Activation and Inactivation Mechanisms in Type I-C Crispr- CAS3 For Genome Editing Applications


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Exploiting Activation and Inactivation Mechanisms in Type I-C Crispr- CAS3 For Genome Editing Applications within 5.0Å range: probe atom residue distance (Å) B Occ P:Mg802 b:30.0 occ:1.00 OD1 P:ASP198 1.5 73.2 1.0 OD2 P:ASP53 1.9 71.8 1.0 MG P:MG801 2.3 30.0 1.0 O1 P:PO4804 2.4 30.0 1.0 CG P:ASP198 2.6 73.2 1.0 NE2 P:HIS25 2.7 81.6 1.0 CG P:ASP53 3.0 71.8 1.0 OD2 P:ASP198 3.1 73.2 1.0 NE2 P:HIS52 3.2 72.0 1.0 NZ P:LYS56 3.3 77.1 1.0 CE1 P:HIS25 3.4 81.6 1.0 CD2 P:HIS52 3.4 72.0 1.0 NE2 P:HIS8 3.5 87.6 1.0 OD1 P:ASP53 3.6 71.8 1.0 CE1 P:HIS8 3.7 87.6 1.0 CD2 P:HIS25 3.8 81.6 1.0 NE2 P:HIS119 3.8 66.2 1.0 P P:PO4804 3.8 30.0 1.0 CE1 P:HIS119 3.8 66.2 1.0 CB P:ASP198 3.9 73.2 1.0 O2 P:PO4804 4.1 30.0 1.0 CB P:ASP53 4.2 71.8 1.0 CE1 P:HIS52 4.4 72.0 1.0 CE P:LYS56 4.5 77.1 1.0 NE2 P:HIS118 4.5 64.8 1.0 CA P:ASP198 4.6 73.2 1.0 O P:ASP198 4.6 73.2 1.0 CD2 P:HIS118 4.6 64.8 1.0 O4 P:PO4804 4.6 30.0 1.0 ND1 P:HIS25 4.6 81.6 1.0 CG P:HIS52 4.7 72.0 1.0 O3 P:PO4804 4.8 30.0 1.0 CD2 P:HIS8 4.8 87.6 1.0 CB P:THR202 4.8 80.9 1.0 CG P:HIS25 4.8 81.6 1.0 C P:ASP198 4.9 73.2 1.0 CD P:LYS56 5.0 77.1 1.0

C.Hu, M.T.Myers, X.Zhou, Z.Hou, M.L.Lozen, K.H.Nam, Y.Zhang, A.Ke. Exploiting Activation and Inactivation Mechanisms in Type I-C Crispr-CAS3 For Genome-Editing Applications. Mol.Cell V. 84 463 2024.
ISSN: ISSN 1097-2765
PubMed: 38242128
DOI: 10.1016/J.MOLCEL.2023.12.034