Magnesium in PDB 8gcd: Full Length Integrin ALPHAIIBBETA3 in Inactive State

The structure of Full Length Integrin ALPHAIIBBETA3 in Inactive State also contains other interesting chemical elements:

Calcium

(Ca)

7 atoms

The binding sites of Magnesium atom in the Full Length Integrin ALPHAIIBBETA3 in Inactive State (pdb code 8gcd). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Full Length Integrin ALPHAIIBBETA3 in Inactive State, PDB code: 8gcd:

Magnesium binding site 1 out of 1 in the Full Length Integrin ALPHAIIBBETA3 in Inactive State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Full Length Integrin ALPHAIIBBETA3 in Inactive State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg2001 b:48.4 occ:1.00 OE2 B:GLU220 2.2 40.4 1.0 OG B:SER123 2.2 43.1 1.0 CD B:GLU220 3.2 40.4 1.0 CB B:SER121 3.3 39.7 1.0 CB B:SER123 3.4 43.1 1.0 OG B:SER121 3.5 39.7 1.0 CG B:GLU220 4.0 40.4 1.0 OE1 B:GLU220 4.0 40.4 1.0 N B:SER123 4.3 43.1 1.0 CA B:SER123 4.4 43.1 1.0 O B:ALA218 4.4 29.9 1.0 CA B:SER121 4.7 39.7 1.0 CB B:ALA252 4.8 37.2 1.0 CB B:ASP251 4.8 46.4 1.0 CG B:MET124 4.9 47.0 1.0

T.Huo, H.Wu, Z.Moussa, M.Sen, V.Daltion, Z.Wang. Full-Length ALPHAIIBBETA3 Cryoem Structure Reveals Intact Integrin Initiate-Activation Intrinsic Architecture To Be Published.