Magnesium in PDB 8h9d: Crystal Structure of CAS12A Protein

The structure of Crystal Structure of CAS12A Protein, PDB code: 8h9d was solved by L.Jianwei, C.Jobichen, J.Sivaraman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.98 / 3.10
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	235.701, 85.628, 139.303, 90, 110.15, 90
R / Rfree (%)	23.2 / 25.2

The binding sites of Magnesium atom in the Crystal Structure of CAS12A Protein (pdb code 8h9d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of CAS12A Protein, PDB code: 8h9d:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of CAS12A Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of CAS12A Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1302 b:66.8 occ:1.00 OP2 G:A19 2.3 68.1 1.0 O A:LYS695 2.6 73.5 1.0 C A:LYS695 3.7 71.9 1.0 P G:A19 3.7 69.8 1.0 OD1 A:ASP687 4.2 75.3 1.0 OP2 G:U18 4.3 68.2 1.0 ND2 A:ASN697 4.3 68.7 1.0 O5' G:A19 4.3 66.0 1.0 OP1 G:U18 4.4 71.4 1.0 C A:LEU696 4.4 68.5 1.0 N A:LEU696 4.5 70.9 1.0 CA A:LEU696 4.5 69.5 1.0 P G:U18 4.6 69.9 1.0 O5' G:U18 4.6 68.7 1.0 OP1 G:A19 4.6 72.8 1.0 N A:ASN697 4.6 67.7 1.0 O A:LEU696 4.7 68.3 1.0 O3' G:U18 4.7 70.2 1.0 CA A:LYS695 4.7 72.8 1.0 N A:LYS695 4.7 74.2 1.0 C3' G:U18 4.8 68.5 1.0 CG A:ASN697 4.8 66.9 1.0 OP2 G:G20 4.9 66.8 1.0 CG A:ASP687 4.9 70.4 1.0 OD2 A:ASP687 4.9 68.1 1.0 OD1 A:ASN697 4.9 65.8 1.0 C8 G:A19 5.0 64.3 1.0 N7 G:A19 5.0 61.6 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of CAS12A Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of CAS12A Protein within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg101 b:63.9 occ:1.00 O G:HOH206 2.0 68.6 1.0 O G:HOH203 2.0 61.4 1.0 O G:HOH204 2.1 70.4 1.0 O G:HOH205 2.1 67.2 1.0 O G:HOH202 2.3 67.3 1.0 O G:HOH201 2.4 65.9 1.0 OP2 G:A10 3.7 63.9 1.0 OP2 G:U9 4.0 63.2 1.0 O4 G:U5 4.2 63.9 1.0 OP2 G:A4 4.2 68.7 1.0 N7 G:A10 4.8 70.0 1.0 O5' G:U9 4.8 61.0 1.0 P G:U9 4.9 62.4 1.0

L.Jianwei, C.Jobichen, J.Sivaraman. Crystal Structure of CAS12A Protein To Be Published.