Magnesium in PDB 8hac: A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo

The structure of A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo, PDB code: 8hac was solved by H.Y.Chang, T.P.Ko, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.70 / 2.32
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	101.297, 125.212, 120.648, 90, 90, 90
R / Rfree (%)	19.3 / 24.4

The binding sites of Magnesium atom in the A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo (pdb code 8hac). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo, PDB code: 8hac:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:51.3 occ:1.00 O A:HOH515 2.2 40.1 1.0 O2B A:ADP400 2.2 28.7 1.0 OD2 A:ASP57 2.4 82.5 1.0 OG1 A:THR34 2.6 28.0 1.0 O A:HOH539 2.7 43.4 1.0 O1B A:ADP400 3.2 34.8 1.0 PB A:ADP400 3.2 33.8 1.0 OD1 A:ASN61 3.5 79.0 1.0 O2A A:ADP400 3.6 48.5 1.0 CG A:ASP57 3.6 84.9 1.0 CG A:ASN61 3.8 77.4 1.0 CB A:THR34 3.8 40.6 1.0 CB A:ASN61 3.8 66.2 1.0 O3A A:ADP400 4.2 41.8 1.0 OD2 A:ASP145 4.3 39.6 1.0 O3B A:ADP400 4.3 38.3 1.0 PA A:ADP400 4.4 34.1 1.0 N A:THR34 4.4 25.4 1.0 OD1 A:ASP57 4.4 84.2 1.0 CB A:ASP57 4.5 78.5 1.0 ND2 A:ASN61 4.6 80.6 1.0 CA A:THR34 4.7 37.9 1.0 OD1 A:ASP145 4.7 35.4 1.0 CG2 A:THR34 4.8 42.4 1.0 O1A A:ADP400 4.9 38.7 1.0 NZ A:LYS33 4.9 34.0 1.0 CG A:ASP145 4.9 35.6 1.0 CE A:LYS33 5.0 29.6 1.0

Magnesium binding site 2 out of 2 in the A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:45.8 occ:1.00 OG1 B:THR34 2.4 38.1 1.0 OD2 B:ASP57 2.5 84.3 1.0 O2B B:ADP400 2.6 30.6 1.0 O B:HOH512 2.7 46.2 1.0 OD1 B:ASP145 3.1 38.0 1.0 OD2 B:ASP145 3.3 42.3 1.0 CG B:ASP57 3.4 77.5 1.0 CG B:ASP145 3.6 32.4 1.0 CB B:ASP57 3.7 70.3 1.0 PB B:ADP400 3.8 27.5 1.0 CB B:THR34 3.8 28.0 1.0 CE B:LYS33 3.9 28.1 1.0 N B:THR34 3.9 24.4 1.0 O1B B:ADP400 4.1 31.5 1.0 CB B:LYS33 4.1 24.4 1.0 CA B:THR34 4.2 26.9 1.0 NZ B:LYS33 4.3 34.6 1.0 O B:THR146 4.3 30.4 1.0 OD1 B:ASN61 4.3 64.0 1.0 O3B B:ADP400 4.5 28.2 1.0 OD1 B:ASP57 4.5 71.4 1.0 C B:LYS33 4.7 26.9 1.0 CG2 B:THR34 4.8 29.4 1.0 CA B:LYS33 4.9 28.0 1.0 CB B:ASN61 5.0 57.4 1.0 O2A B:ADP400 5.0 35.6 1.0 CD B:LYS33 5.0 23.4 1.0

H.Y.Chang, T.P.Ko. A Novel Dimer Configuration of A Diatom GET3 Forming A Tetrameric Complex with Its Tail-Anchored Membrane Cargo To Be Published.