Magnesium in PDB 8hh1: FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp

Enzymatic activity of FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp

All present enzymatic activity of FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp:
7.1.2.2;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp (pdb code 8hh1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp, PDB code: 8hh1:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in 8hh1

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Magnesium binding site 1 out of 5 in the FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:52.4
occ:1.00
 OG1 A:THR176 2.0 50.5 1.0
O1G A:ATP600 2.1 57.1 1.0
O1B A:ATP600 2.2 57.1 1.0
PG A:ATP600 3.2 57.1 1.0
PB A:ATP600 3.3 57.1 1.0
CB A:THR176 3.3 50.5 1.0
O3B A:ATP600 3.4 57.1 1.0
O2A A:ATP600 3.7 57.1 1.0
O3G A:ATP600 3.9 57.1 1.0
CG2 A:THR176 4.0 50.5 1.0
O3A A:ATP600 4.2 57.1 1.0
N A:THR176 4.3 50.5 1.0
OD1 A:ASP261 4.4 51.9 1.0
CA A:THR176 4.4 50.5 1.0
O2B A:ATP600 4.5 57.1 1.0
O2G A:ATP600 4.5 57.1 1.0
OD2 A:ASP261 4.6 51.9 1.0
PA A:ATP600 4.6 57.1 1.0
NH2 D:ARG352 4.8 59.4 1.0
CG A:ASP261 4.9 51.9 1.0

Magnesium binding site 2 out of 5 in 8hh1

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Magnesium binding site 2 out of 5 in the FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg601

b:57.7
occ:1.00
 O2G B:ATP600 2.0 60.0 1.0
OG1 B:THR176 2.1 52.6 1.0
O2B B:ATP600 2.5 60.0 1.0
CB B:THR176 3.3 52.6 1.0
PG B:ATP600 3.4 60.0 1.0
O3B B:ATP600 3.7 60.0 1.0
O2A B:ATP600 3.7 60.0 1.0
PB B:ATP600 3.7 60.0 1.0
CG2 B:THR176 3.9 52.6 1.0
OD1 B:ASP261 4.0 50.7 1.0
OE1 B:GLN200 4.2 54.0 1.0
O1G B:ATP600 4.3 60.0 1.0
O3G B:ATP600 4.4 60.0 1.0
CA B:THR176 4.5 52.6 1.0
OD2 B:ASP261 4.5 50.7 1.0
N B:THR176 4.6 52.6 1.0
O3A B:ATP600 4.6 60.0 1.0
CG B:ASP261 4.7 50.7 1.0
PA B:ATP600 4.8 60.0 1.0
O1B B:ATP600 4.8 60.0 1.0

Magnesium binding site 3 out of 5 in 8hh1

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Magnesium binding site 3 out of 5 in the FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg601

b:48.7
occ:1.00
 OG1 C:THR176 2.0 47.8 1.0
O1G C:ATP600 2.1 52.7 1.0
O2B C:ATP600 2.3 52.7 1.0
PG C:ATP600 3.2 52.7 1.0
CB C:THR176 3.3 47.8 1.0
O3B C:ATP600 3.4 52.7 1.0
PB C:ATP600 3.4 52.7 1.0
CG2 C:THR176 4.0 47.8 1.0
OD2 C:ASP261 4.1 48.9 1.0
O2G C:ATP600 4.1 52.7 1.0
N C:THR176 4.3 47.8 1.0
CA C:THR176 4.4 47.8 1.0
O3A C:ATP600 4.4 52.7 1.0
O3G C:ATP600 4.4 52.7 1.0
O2A C:ATP600 4.4 52.7 1.0
O1B C:ATP600 4.5 52.7 1.0
PA C:ATP600 4.8 52.7 1.0
O1A C:ATP600 4.8 52.7 1.0

Magnesium binding site 4 out of 5 in 8hh1

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Magnesium binding site 4 out of 5 in the FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg601

b:61.4
occ:1.00
 OG1 D:THR165 1.7 55.5 1.0
O1G D:ATP602 1.8 60.3 1.0
O1B D:ATP602 2.4 60.3 1.0
PG D:ATP602 2.8 60.3 1.0
CB D:THR165 3.0 55.5 1.0
O3B D:ATP602 3.1 60.3 1.0
PB D:ATP602 3.2 60.3 1.0
O1A D:ATP602 3.2 60.3 1.0
OE2 D:GLU194 3.4 56.8 1.0
O2G D:ATP602 3.4 60.3 1.0
O3A D:ATP602 3.7 60.3 1.0
CG2 D:THR165 3.9 55.5 1.0
N D:THR165 3.9 55.5 1.0
PA D:ATP602 4.0 60.3 1.0
NH1 D:ARG191 4.0 53.3 1.0
CA D:THR165 4.0 55.5 1.0
O3G D:ATP602 4.1 60.3 1.0
CD D:GLU194 4.2 56.8 1.0
OE1 D:GLU194 4.2 56.8 1.0
OE1 D:GLU190 4.2 54.8 1.0
O2A D:ATP602 4.6 60.3 1.0
O2B D:ATP602 4.6 60.3 1.0

Magnesium binding site 5 out of 5 in 8hh1

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Magnesium binding site 5 out of 5 in the FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of FOF1-Atpase From Bacillus PS3, 81 Degrees, Highatp within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg601

b:53.3
occ:1.00
 OG1 F:THR165 2.0 49.9 1.0
O3G F:ATP602 2.1 52.8 1.0
O2B F:ATP602 2.2 52.8 1.0
OE1 F:GLU190 3.1 54.4 1.0
CB F:THR165 3.4 49.9 1.0
PG F:ATP602 3.4 52.8 1.0
PB F:ATP602 3.5 52.8 1.0
O3B F:ATP602 3.6 52.8 1.0
NH1 F:ARG191 4.0 50.6 1.0
OE1 F:GLU194 4.1 55.8 1.0
N F:THR165 4.1 49.9 1.0
CD F:GLU190 4.2 54.4 1.0
OE2 F:GLU194 4.2 55.8 1.0
O1G F:ATP602 4.3 52.8 1.0
CA F:THR165 4.3 49.9 1.0
CG2 F:THR165 4.3 49.9 1.0
O1B F:ATP602 4.5 52.8 1.0
O3A F:ATP602 4.5 52.8 1.0
O2G F:ATP602 4.5 52.8 1.0
O1A F:ATP602 4.5 52.8 1.0
CD F:GLU194 4.6 55.8 1.0
OE2 F:GLU190 4.6 54.4 1.0
OD1 F:ASP252 4.9 52.4 1.0
PA F:ATP602 4.9 52.8 1.0
CE F:LYS164 5.0 47.5 1.0
CB F:LYS164 5.0 47.5 1.0

Reference:

A.Nakano, K.Yokoyama, J.Kishikawa, K.Mitsuoka. Rotation Mechanism of Atp Synthases Driven By Atp Hydrolysis To Be Published.
Page generated: Fri Jul 28 00:47:17 2023

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