Magnesium in PDB 8hju: Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Other elements in 8hju:
The structure of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux also contains other interesting chemical elements:
Magnesium Binding Sites:
Magnesium binding site 1 out
of 48 in 8hju
Go back to
Magnesium Binding Sites List in 8hju
Magnesium binding site 1 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
0:Mg101
b:27.6
occ:1.00
|
MG
|
0:BCL101
|
0.0
|
27.6
|
1.0
|
ND
|
0:BCL101
|
1.9
|
27.6
|
1.0
|
NB
|
0:BCL101
|
2.0
|
27.6
|
1.0
|
NC
|
0:BCL101
|
2.1
|
27.6
|
1.0
|
NA
|
0:BCL101
|
2.1
|
27.6
|
1.0
|
C4D
|
0:BCL101
|
2.8
|
27.6
|
1.0
|
NE2
|
0:HIS44
|
2.9
|
25.4
|
1.0
|
C1B
|
0:BCL101
|
2.9
|
27.6
|
1.0
|
C4B
|
0:BCL101
|
3.0
|
27.6
|
1.0
|
C1C
|
0:BCL101
|
3.0
|
27.6
|
1.0
|
C4A
|
0:BCL101
|
3.0
|
27.6
|
1.0
|
C1D
|
0:BCL101
|
3.1
|
27.6
|
1.0
|
C1A
|
0:BCL101
|
3.1
|
27.6
|
1.0
|
C4C
|
0:BCL101
|
3.1
|
27.6
|
1.0
|
CMB
|
7:BCL101
|
3.3
|
29.3
|
1.0
|
CHB
|
0:BCL101
|
3.3
|
27.6
|
1.0
|
CHA
|
0:BCL101
|
3.3
|
27.6
|
1.0
|
CHC
|
0:BCL101
|
3.4
|
27.6
|
1.0
|
CHD
|
0:BCL101
|
3.5
|
27.6
|
1.0
|
CD2
|
0:HIS44
|
3.8
|
25.4
|
1.0
|
CE1
|
0:HIS44
|
3.9
|
25.4
|
1.0
|
C3D
|
0:BCL101
|
4.1
|
27.6
|
1.0
|
C2B
|
0:BCL101
|
4.1
|
27.6
|
1.0
|
C2B
|
7:BCL101
|
4.1
|
29.3
|
1.0
|
CBB
|
7:BCL101
|
4.1
|
29.3
|
1.0
|
C3B
|
0:BCL101
|
4.1
|
27.6
|
1.0
|
C2D
|
0:BCL101
|
4.2
|
27.6
|
1.0
|
CG2
|
9:ILE26
|
4.3
|
19.7
|
1.0
|
C2C
|
0:BCL101
|
4.4
|
27.6
|
1.0
|
CAB
|
7:BCL101
|
4.4
|
29.3
|
1.0
|
C3A
|
0:BCL101
|
4.4
|
27.6
|
1.0
|
C2A
|
0:BCL101
|
4.4
|
27.6
|
1.0
|
C3C
|
0:BCL101
|
4.4
|
27.6
|
1.0
|
C3B
|
7:BCL101
|
4.5
|
29.3
|
1.0
|
CBD
|
0:BCL101
|
4.8
|
27.6
|
1.0
|
CD1
|
9:ILE26
|
4.8
|
19.7
|
1.0
|
CMA
|
0:BCL101
|
4.9
|
27.6
|
1.0
|
CG
|
0:HIS44
|
5.0
|
25.4
|
1.0
|
ND1
|
0:HIS44
|
5.0
|
25.4
|
1.0
|
|
Magnesium binding site 2 out
of 48 in 8hju
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Magnesium Binding Sites List in 8hju
Magnesium binding site 2 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
0:Mg102
b:39.0
occ:1.00
|
MG
|
0:BCL102
|
0.0
|
39.0
|
1.0
|
ND
|
0:BCL102
|
1.9
|
39.0
|
1.0
|
NB
|
0:BCL102
|
2.0
|
39.0
|
1.0
|
NC
|
0:BCL102
|
2.1
|
39.0
|
1.0
|
NA
|
0:BCL102
|
2.1
|
39.0
|
1.0
|
NE2
|
0:HIS26
|
2.3
|
36.7
|
1.0
|
C4D
|
0:BCL102
|
2.8
|
39.0
|
1.0
|
C1B
|
0:BCL102
|
2.9
|
39.0
|
1.0
|
C4B
|
0:BCL102
|
3.0
|
39.0
|
1.0
|
C1C
|
0:BCL102
|
3.0
|
39.0
|
1.0
|
C4A
|
0:BCL102
|
3.1
|
39.0
|
1.0
|
C1D
|
0:BCL102
|
3.1
|
39.0
|
1.0
|
C1A
|
0:BCL102
|
3.1
|
39.0
|
1.0
|
C4C
|
0:BCL102
|
3.1
|
39.0
|
1.0
|
CD2
|
0:HIS26
|
3.2
|
36.7
|
1.0
|
CHA
|
0:BCL102
|
3.3
|
39.0
|
1.0
|
CHB
|
0:BCL102
|
3.3
|
39.0
|
1.0
|
CE1
|
0:HIS26
|
3.4
|
36.7
|
1.0
|
CHC
|
0:BCL102
|
3.4
|
39.0
|
1.0
|
CHD
|
0:BCL102
|
3.5
|
39.0
|
1.0
|
C3D
|
0:BCL102
|
4.1
|
39.0
|
1.0
|
C2B
|
0:BCL102
|
4.1
|
39.0
|
1.0
|
C3B
|
0:BCL102
|
4.1
|
39.0
|
1.0
|
C2D
|
0:BCL102
|
4.2
|
39.0
|
1.0
|
C3A
|
0:BCL102
|
4.3
|
39.0
|
1.0
|
C2C
|
0:BCL102
|
4.3
|
39.0
|
1.0
|
CG
|
0:HIS26
|
4.4
|
36.7
|
1.0
|
C2A
|
0:BCL102
|
4.4
|
39.0
|
1.0
|
ND1
|
0:HIS26
|
4.4
|
36.7
|
1.0
|
C3C
|
0:BCL102
|
4.5
|
39.0
|
1.0
|
CMA
|
0:BCL102
|
4.7
|
39.0
|
1.0
|
CG2
|
0:VAL30
|
4.7
|
35.6
|
1.0
|
CZ
|
0:PHE18
|
4.8
|
42.7
|
1.0
|
CBD
|
0:BCL102
|
4.8
|
39.0
|
1.0
|
|
Magnesium binding site 3 out
of 48 in 8hju
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Magnesium Binding Sites List in 8hju
Magnesium binding site 3 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg101
b:36.5
occ:1.00
|
MG
|
1:BCL101
|
0.0
|
36.5
|
1.0
|
ND
|
1:BCL101
|
1.9
|
36.5
|
1.0
|
NB
|
1:BCL101
|
2.0
|
36.5
|
1.0
|
NC
|
1:BCL101
|
2.1
|
36.5
|
1.0
|
NA
|
1:BCL101
|
2.1
|
36.5
|
1.0
|
C4D
|
1:BCL101
|
2.8
|
36.5
|
1.0
|
NE2
|
1:HIS27
|
2.9
|
32.6
|
1.0
|
C1B
|
1:BCL101
|
2.9
|
36.5
|
1.0
|
C4B
|
1:BCL101
|
3.0
|
36.5
|
1.0
|
C1C
|
1:BCL101
|
3.0
|
36.5
|
1.0
|
C4A
|
1:BCL101
|
3.1
|
36.5
|
1.0
|
C1D
|
1:BCL101
|
3.1
|
36.5
|
1.0
|
C1A
|
1:BCL101
|
3.1
|
36.5
|
1.0
|
C4C
|
1:BCL101
|
3.1
|
36.5
|
1.0
|
CHB
|
1:BCL101
|
3.3
|
36.5
|
1.0
|
CHA
|
1:BCL101
|
3.3
|
36.5
|
1.0
|
CHC
|
1:BCL101
|
3.4
|
36.5
|
1.0
|
CHD
|
1:BCL101
|
3.5
|
36.5
|
1.0
|
CE1
|
1:HIS27
|
3.8
|
32.6
|
1.0
|
CBB
|
4:BCL101
|
3.8
|
33.4
|
1.0
|
CD2
|
1:HIS27
|
3.9
|
32.6
|
1.0
|
C3D
|
1:BCL101
|
4.1
|
36.5
|
1.0
|
C2B
|
1:BCL101
|
4.1
|
36.5
|
1.0
|
C3B
|
1:BCL101
|
4.2
|
36.5
|
1.0
|
C2D
|
1:BCL101
|
4.2
|
36.5
|
1.0
|
CBO
|
2:KGD104
|
4.3
|
43.7
|
1.0
|
C2C
|
1:BCL101
|
4.3
|
36.5
|
1.0
|
CBM
|
2:KGD104
|
4.3
|
43.7
|
1.0
|
C3C
|
1:BCL101
|
4.4
|
36.5
|
1.0
|
C3A
|
1:BCL101
|
4.4
|
36.5
|
1.0
|
C2A
|
1:BCL101
|
4.4
|
36.5
|
1.0
|
CMB
|
4:BCL101
|
4.4
|
33.4
|
1.0
|
CBK
|
2:KGD104
|
4.6
|
43.7
|
1.0
|
C2B
|
4:BCL101
|
4.8
|
33.4
|
1.0
|
CAB
|
4:BCL101
|
4.8
|
33.4
|
1.0
|
CBD
|
1:BCL101
|
4.8
|
36.5
|
1.0
|
CBN
|
2:KGD104
|
4.9
|
43.7
|
1.0
|
CBL
|
2:KGD104
|
4.9
|
43.7
|
1.0
|
ND1
|
1:HIS27
|
4.9
|
32.6
|
1.0
|
C3B
|
4:BCL101
|
4.9
|
33.4
|
1.0
|
|
Magnesium binding site 4 out
of 48 in 8hju
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Magnesium Binding Sites List in 8hju
Magnesium binding site 4 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg102
b:37.8
occ:1.00
|
MG
|
2:BCL102
|
0.0
|
37.8
|
1.0
|
ND
|
2:BCL102
|
1.9
|
37.8
|
1.0
|
NB
|
2:BCL102
|
2.0
|
37.8
|
1.0
|
NC
|
2:BCL102
|
2.1
|
37.8
|
1.0
|
NA
|
2:BCL102
|
2.1
|
37.8
|
1.0
|
C4D
|
2:BCL102
|
2.8
|
37.8
|
1.0
|
NE2
|
2:HIS44
|
2.9
|
39.2
|
1.0
|
C1B
|
2:BCL102
|
2.9
|
37.8
|
1.0
|
C4B
|
2:BCL102
|
3.0
|
37.8
|
1.0
|
C1C
|
2:BCL102
|
3.0
|
37.8
|
1.0
|
C4A
|
2:BCL102
|
3.0
|
37.8
|
1.0
|
C1D
|
2:BCL102
|
3.1
|
37.8
|
1.0
|
C1A
|
2:BCL102
|
3.1
|
37.8
|
1.0
|
C4C
|
2:BCL102
|
3.1
|
37.8
|
1.0
|
CHB
|
2:BCL102
|
3.3
|
37.8
|
1.0
|
CHA
|
2:BCL102
|
3.3
|
37.8
|
1.0
|
CHC
|
2:BCL102
|
3.4
|
37.8
|
1.0
|
CHD
|
2:BCL102
|
3.5
|
37.8
|
1.0
|
CD1
|
C:ILE42
|
3.6
|
33.2
|
1.0
|
CD2
|
2:HIS44
|
3.8
|
39.2
|
1.0
|
CE1
|
2:HIS44
|
3.9
|
39.2
|
1.0
|
C3D
|
2:BCL102
|
4.1
|
37.8
|
1.0
|
C2B
|
2:BCL102
|
4.1
|
37.8
|
1.0
|
C3B
|
2:BCL102
|
4.1
|
37.8
|
1.0
|
C2D
|
2:BCL102
|
4.2
|
37.8
|
1.0
|
CG1
|
C:ILE42
|
4.3
|
33.2
|
1.0
|
C2C
|
2:BCL102
|
4.4
|
37.8
|
1.0
|
C3A
|
2:BCL102
|
4.4
|
37.8
|
1.0
|
C2A
|
2:BCL102
|
4.4
|
37.8
|
1.0
|
C3C
|
2:BCL102
|
4.4
|
37.8
|
1.0
|
CBD
|
2:BCL102
|
4.8
|
37.8
|
1.0
|
CMA
|
2:BCL102
|
4.9
|
37.8
|
1.0
|
CD1
|
1:ILE26
|
4.9
|
31.8
|
1.0
|
CG2
|
1:ILE26
|
5.0
|
31.8
|
1.0
|
CG
|
2:HIS44
|
5.0
|
39.2
|
1.0
|
ND1
|
2:HIS44
|
5.0
|
39.2
|
1.0
|
|
Magnesium binding site 5 out
of 48 in 8hju
Go back to
Magnesium Binding Sites List in 8hju
Magnesium binding site 5 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg103
b:56.8
occ:1.00
|
MG
|
2:BCL103
|
0.0
|
56.8
|
1.0
|
ND
|
2:BCL103
|
1.9
|
56.8
|
1.0
|
NB
|
2:BCL103
|
2.0
|
56.8
|
1.0
|
NC
|
2:BCL103
|
2.1
|
56.8
|
1.0
|
NA
|
2:BCL103
|
2.1
|
56.8
|
1.0
|
NE2
|
2:HIS26
|
2.3
|
49.1
|
1.0
|
C4D
|
2:BCL103
|
2.8
|
56.8
|
1.0
|
C1B
|
2:BCL103
|
2.9
|
56.8
|
1.0
|
C4B
|
2:BCL103
|
3.0
|
56.8
|
1.0
|
C1C
|
2:BCL103
|
3.0
|
56.8
|
1.0
|
C4A
|
2:BCL103
|
3.0
|
56.8
|
1.0
|
C1D
|
2:BCL103
|
3.1
|
56.8
|
1.0
|
C1A
|
2:BCL103
|
3.1
|
56.8
|
1.0
|
C4C
|
2:BCL103
|
3.1
|
56.8
|
1.0
|
CD2
|
2:HIS26
|
3.2
|
49.1
|
1.0
|
CHA
|
2:BCL103
|
3.3
|
56.8
|
1.0
|
CHB
|
2:BCL103
|
3.3
|
56.8
|
1.0
|
CE1
|
2:HIS26
|
3.3
|
49.1
|
1.0
|
CHC
|
2:BCL103
|
3.4
|
56.8
|
1.0
|
CHD
|
2:BCL103
|
3.5
|
56.8
|
1.0
|
C3D
|
2:BCL103
|
4.1
|
56.8
|
1.0
|
C2B
|
2:BCL103
|
4.1
|
56.8
|
1.0
|
C3B
|
2:BCL103
|
4.1
|
56.8
|
1.0
|
CBK
|
C:KGD401
|
4.2
|
52.0
|
1.0
|
C2D
|
2:BCL103
|
4.2
|
56.8
|
1.0
|
C3A
|
2:BCL103
|
4.3
|
56.8
|
1.0
|
C2C
|
2:BCL103
|
4.3
|
56.8
|
1.0
|
CG
|
2:HIS26
|
4.4
|
49.1
|
1.0
|
C2A
|
2:BCL103
|
4.4
|
56.8
|
1.0
|
ND1
|
2:HIS26
|
4.4
|
49.1
|
1.0
|
C3C
|
2:BCL103
|
4.5
|
56.8
|
1.0
|
CMA
|
2:BCL103
|
4.7
|
56.8
|
1.0
|
CG2
|
2:VAL30
|
4.7
|
47.4
|
1.0
|
CZ
|
2:PHE18
|
4.8
|
54.7
|
1.0
|
CBD
|
2:BCL103
|
4.8
|
56.8
|
1.0
|
CAZ
|
C:KGD401
|
4.8
|
52.0
|
1.0
|
|
Magnesium binding site 6 out
of 48 in 8hju
Go back to
Magnesium Binding Sites List in 8hju
Magnesium binding site 6 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
3:Mg101
b:31.6
occ:1.00
|
MG
|
3:BCL101
|
0.0
|
31.6
|
1.0
|
ND
|
3:BCL101
|
1.9
|
31.6
|
1.0
|
NB
|
3:BCL101
|
2.0
|
31.6
|
1.0
|
NC
|
3:BCL101
|
2.1
|
31.6
|
1.0
|
NA
|
3:BCL101
|
2.1
|
31.6
|
1.0
|
C4D
|
3:BCL101
|
2.8
|
31.6
|
1.0
|
NE2
|
3:HIS27
|
2.9
|
27.9
|
1.0
|
C1B
|
3:BCL101
|
2.9
|
31.6
|
1.0
|
C4B
|
3:BCL101
|
3.0
|
31.6
|
1.0
|
C1C
|
3:BCL101
|
3.0
|
31.6
|
1.0
|
C4A
|
3:BCL101
|
3.1
|
31.6
|
1.0
|
C1D
|
3:BCL101
|
3.1
|
31.6
|
1.0
|
C1A
|
3:BCL101
|
3.1
|
31.6
|
1.0
|
C4C
|
3:BCL101
|
3.1
|
31.6
|
1.0
|
CHB
|
3:BCL101
|
3.3
|
31.6
|
1.0
|
CHA
|
3:BCL101
|
3.3
|
31.6
|
1.0
|
CHC
|
3:BCL101
|
3.4
|
31.6
|
1.0
|
CHD
|
3:BCL101
|
3.5
|
31.6
|
1.0
|
CBB
|
6:BCL101
|
3.6
|
30.3
|
1.0
|
CE1
|
3:HIS27
|
3.8
|
27.9
|
1.0
|
CD2
|
3:HIS27
|
3.9
|
27.9
|
1.0
|
C3D
|
3:BCL101
|
4.1
|
31.6
|
1.0
|
C2B
|
3:BCL101
|
4.1
|
31.6
|
1.0
|
C3B
|
3:BCL101
|
4.2
|
31.6
|
1.0
|
C2D
|
3:BCL101
|
4.2
|
31.6
|
1.0
|
CMB
|
6:BCL101
|
4.3
|
30.3
|
1.0
|
C2C
|
3:BCL101
|
4.3
|
31.6
|
1.0
|
CBO
|
4:KGD103
|
4.3
|
35.6
|
1.0
|
C3C
|
3:BCL101
|
4.3
|
31.6
|
1.0
|
C3A
|
3:BCL101
|
4.4
|
31.6
|
1.0
|
C2A
|
3:BCL101
|
4.4
|
31.6
|
1.0
|
C2B
|
6:BCL101
|
4.6
|
30.3
|
1.0
|
CAB
|
6:BCL101
|
4.6
|
30.3
|
1.0
|
C3B
|
6:BCL101
|
4.8
|
30.3
|
1.0
|
CBD
|
3:BCL101
|
4.8
|
31.6
|
1.0
|
ND1
|
3:HIS27
|
4.9
|
27.9
|
1.0
|
CBM
|
4:KGD103
|
5.0
|
35.6
|
1.0
|
|
Magnesium binding site 7 out
of 48 in 8hju
Go back to
Magnesium Binding Sites List in 8hju
Magnesium binding site 7 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
4:Mg101
b:33.4
occ:1.00
|
MG
|
4:BCL101
|
0.0
|
33.4
|
1.0
|
ND
|
4:BCL101
|
1.9
|
33.4
|
1.0
|
NB
|
4:BCL101
|
2.0
|
33.4
|
1.0
|
NC
|
4:BCL101
|
2.1
|
33.4
|
1.0
|
NA
|
4:BCL101
|
2.1
|
33.4
|
1.0
|
C4D
|
4:BCL101
|
2.8
|
33.4
|
1.0
|
NE2
|
4:HIS44
|
2.9
|
30.7
|
1.0
|
C1B
|
4:BCL101
|
2.9
|
33.4
|
1.0
|
C4B
|
4:BCL101
|
3.0
|
33.4
|
1.0
|
C1C
|
4:BCL101
|
3.0
|
33.4
|
1.0
|
C4A
|
4:BCL101
|
3.0
|
33.4
|
1.0
|
C1D
|
4:BCL101
|
3.1
|
33.4
|
1.0
|
C1A
|
4:BCL101
|
3.1
|
33.4
|
1.0
|
C4C
|
4:BCL101
|
3.1
|
33.4
|
1.0
|
CHB
|
4:BCL101
|
3.3
|
33.4
|
1.0
|
CHA
|
4:BCL101
|
3.3
|
33.4
|
1.0
|
CHC
|
4:BCL101
|
3.4
|
33.4
|
1.0
|
CHD
|
4:BCL101
|
3.5
|
33.4
|
1.0
|
CMB
|
1:BCL101
|
3.6
|
36.5
|
1.0
|
CD2
|
4:HIS44
|
3.8
|
30.7
|
1.0
|
CE1
|
4:HIS44
|
3.9
|
30.7
|
1.0
|
C3D
|
4:BCL101
|
4.1
|
33.4
|
1.0
|
C2B
|
4:BCL101
|
4.1
|
33.4
|
1.0
|
C3B
|
4:BCL101
|
4.1
|
33.4
|
1.0
|
C2B
|
1:BCL101
|
4.2
|
36.5
|
1.0
|
CBB
|
1:BCL101
|
4.2
|
36.5
|
1.0
|
C2D
|
4:BCL101
|
4.2
|
33.4
|
1.0
|
CAB
|
1:BCL101
|
4.3
|
36.5
|
1.0
|
C2C
|
4:BCL101
|
4.4
|
33.4
|
1.0
|
C3A
|
4:BCL101
|
4.4
|
33.4
|
1.0
|
C2A
|
4:BCL101
|
4.4
|
33.4
|
1.0
|
C3C
|
4:BCL101
|
4.4
|
33.4
|
1.0
|
CG2
|
3:ILE26
|
4.5
|
26.8
|
1.0
|
C3B
|
1:BCL101
|
4.5
|
36.5
|
1.0
|
CBD
|
4:BCL101
|
4.8
|
33.4
|
1.0
|
CMA
|
4:BCL101
|
4.9
|
33.4
|
1.0
|
CD1
|
3:ILE26
|
4.9
|
26.8
|
1.0
|
CG
|
4:HIS44
|
5.0
|
30.7
|
1.0
|
ND1
|
4:HIS44
|
5.0
|
30.7
|
1.0
|
|
Magnesium binding site 8 out
of 48 in 8hju
Go back to
Magnesium Binding Sites List in 8hju
Magnesium binding site 8 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
4:Mg102
b:44.2
occ:1.00
|
MG
|
4:BCL102
|
0.0
|
44.2
|
1.0
|
ND
|
4:BCL102
|
1.9
|
44.2
|
1.0
|
NB
|
4:BCL102
|
2.0
|
44.2
|
1.0
|
NC
|
4:BCL102
|
2.1
|
44.2
|
1.0
|
NA
|
4:BCL102
|
2.1
|
44.2
|
1.0
|
NE2
|
4:HIS26
|
2.3
|
41.8
|
1.0
|
C4D
|
4:BCL102
|
2.8
|
44.2
|
1.0
|
C1B
|
4:BCL102
|
2.9
|
44.2
|
1.0
|
C4B
|
4:BCL102
|
3.0
|
44.2
|
1.0
|
C1C
|
4:BCL102
|
3.0
|
44.2
|
1.0
|
C4A
|
4:BCL102
|
3.1
|
44.2
|
1.0
|
C1D
|
4:BCL102
|
3.1
|
44.2
|
1.0
|
C1A
|
4:BCL102
|
3.1
|
44.2
|
1.0
|
C4C
|
4:BCL102
|
3.1
|
44.2
|
1.0
|
CD2
|
4:HIS26
|
3.2
|
41.8
|
1.0
|
CE1
|
4:HIS26
|
3.3
|
41.8
|
1.0
|
CHA
|
4:BCL102
|
3.3
|
44.2
|
1.0
|
CHB
|
4:BCL102
|
3.3
|
44.2
|
1.0
|
CHC
|
4:BCL102
|
3.4
|
44.2
|
1.0
|
CHD
|
4:BCL102
|
3.5
|
44.2
|
1.0
|
C3D
|
4:BCL102
|
4.1
|
44.2
|
1.0
|
C2B
|
4:BCL102
|
4.1
|
44.2
|
1.0
|
C3B
|
4:BCL102
|
4.1
|
44.2
|
1.0
|
C2D
|
4:BCL102
|
4.2
|
44.2
|
1.0
|
C3A
|
4:BCL102
|
4.3
|
44.2
|
1.0
|
C2C
|
4:BCL102
|
4.3
|
44.2
|
1.0
|
CG
|
4:HIS26
|
4.4
|
41.8
|
1.0
|
ND1
|
4:HIS26
|
4.4
|
41.8
|
1.0
|
C2A
|
4:BCL102
|
4.4
|
44.2
|
1.0
|
C3C
|
4:BCL102
|
4.5
|
44.2
|
1.0
|
CMA
|
4:BCL102
|
4.7
|
44.2
|
1.0
|
CG2
|
4:VAL30
|
4.7
|
37.9
|
1.0
|
CZ
|
4:PHE18
|
4.8
|
47.9
|
1.0
|
CBD
|
4:BCL102
|
4.8
|
44.2
|
1.0
|
OAA
|
2:KGD104
|
4.8
|
43.7
|
1.0
|
CAE
|
2:KGD104
|
4.9
|
43.7
|
1.0
|
CAF
|
2:KGD101
|
4.9
|
50.4
|
1.0
|
|
Magnesium binding site 9 out
of 48 in 8hju
Go back to
Magnesium Binding Sites List in 8hju
Magnesium binding site 9 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
5:Mg101
b:30.4
occ:1.00
|
MG
|
5:BCL101
|
0.0
|
30.4
|
1.0
|
ND
|
5:BCL101
|
1.9
|
30.4
|
1.0
|
NB
|
5:BCL101
|
2.0
|
30.4
|
1.0
|
NC
|
5:BCL101
|
2.1
|
30.4
|
1.0
|
NA
|
5:BCL101
|
2.1
|
30.4
|
1.0
|
C4D
|
5:BCL101
|
2.8
|
30.4
|
1.0
|
NE2
|
5:HIS27
|
2.9
|
25.2
|
1.0
|
C1B
|
5:BCL101
|
2.9
|
30.4
|
1.0
|
C4B
|
5:BCL101
|
3.0
|
30.4
|
1.0
|
C1C
|
5:BCL101
|
3.0
|
30.4
|
1.0
|
C4A
|
5:BCL101
|
3.1
|
30.4
|
1.0
|
C1D
|
5:BCL101
|
3.1
|
30.4
|
1.0
|
C1A
|
5:BCL101
|
3.1
|
30.4
|
1.0
|
C4C
|
5:BCL101
|
3.1
|
30.4
|
1.0
|
CHB
|
5:BCL101
|
3.3
|
30.4
|
1.0
|
CHA
|
5:BCL101
|
3.3
|
30.4
|
1.0
|
CHC
|
5:BCL101
|
3.4
|
30.4
|
1.0
|
CHD
|
5:BCL101
|
3.5
|
30.4
|
1.0
|
CE1
|
5:HIS27
|
3.8
|
25.2
|
1.0
|
CBB
|
8:BCL101
|
3.8
|
29.9
|
1.0
|
CD2
|
5:HIS27
|
3.9
|
25.2
|
1.0
|
C3D
|
5:BCL101
|
4.1
|
30.4
|
1.0
|
C2B
|
5:BCL101
|
4.1
|
30.4
|
1.0
|
C3B
|
5:BCL101
|
4.2
|
30.4
|
1.0
|
C2D
|
5:BCL101
|
4.2
|
30.4
|
1.0
|
C2C
|
5:BCL101
|
4.3
|
30.4
|
1.0
|
C3C
|
5:BCL101
|
4.4
|
30.4
|
1.0
|
C3A
|
5:BCL101
|
4.4
|
30.4
|
1.0
|
C2A
|
5:BCL101
|
4.4
|
30.4
|
1.0
|
CMB
|
8:BCL101
|
4.5
|
29.9
|
1.0
|
CBO
|
6:KGD103
|
4.7
|
34.4
|
1.0
|
CBK
|
6:KGD103
|
4.7
|
34.4
|
1.0
|
CBM
|
6:KGD103
|
4.7
|
34.4
|
1.0
|
C2B
|
8:BCL101
|
4.8
|
29.9
|
1.0
|
CAB
|
8:BCL101
|
4.8
|
29.9
|
1.0
|
CMD
|
6:BCL101
|
4.8
|
30.3
|
1.0
|
CBD
|
5:BCL101
|
4.8
|
30.4
|
1.0
|
ND1
|
5:HIS27
|
4.9
|
25.2
|
1.0
|
C3B
|
8:BCL101
|
5.0
|
29.9
|
1.0
|
|
Magnesium binding site 10 out
of 48 in 8hju
Go back to
Magnesium Binding Sites List in 8hju
Magnesium binding site 10 out
of 48 in the Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Cryo-Em Structure of Native Rc-Lh Complex From Roseiflexus Castenholzii at 10,000 Lux within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
6:Mg101
b:30.3
occ:1.00
|
MG
|
6:BCL101
|
0.0
|
30.3
|
1.0
|
ND
|
6:BCL101
|
1.9
|
30.3
|
1.0
|
NB
|
6:BCL101
|
2.0
|
30.3
|
1.0
|
NC
|
6:BCL101
|
2.1
|
30.3
|
1.0
|
NA
|
6:BCL101
|
2.1
|
30.3
|
1.0
|
C4D
|
6:BCL101
|
2.8
|
30.3
|
1.0
|
NE2
|
6:HIS44
|
2.9
|
28.1
|
1.0
|
C1B
|
6:BCL101
|
2.9
|
30.3
|
1.0
|
C4B
|
6:BCL101
|
3.0
|
30.3
|
1.0
|
C1C
|
6:BCL101
|
3.0
|
30.3
|
1.0
|
C4A
|
6:BCL101
|
3.0
|
30.3
|
1.0
|
C1D
|
6:BCL101
|
3.1
|
30.3
|
1.0
|
C1A
|
6:BCL101
|
3.1
|
30.3
|
1.0
|
C4C
|
6:BCL101
|
3.1
|
30.3
|
1.0
|
CHB
|
6:BCL101
|
3.3
|
30.3
|
1.0
|
CHA
|
6:BCL101
|
3.3
|
30.3
|
1.0
|
CHC
|
6:BCL101
|
3.4
|
30.3
|
1.0
|
CHD
|
6:BCL101
|
3.5
|
30.3
|
1.0
|
CMB
|
3:BCL101
|
3.5
|
31.6
|
1.0
|
CD2
|
6:HIS44
|
3.8
|
28.1
|
1.0
|
CE1
|
6:HIS44
|
3.9
|
28.1
|
1.0
|
C3D
|
6:BCL101
|
4.1
|
30.3
|
1.0
|
C2B
|
6:BCL101
|
4.1
|
30.3
|
1.0
|
C3B
|
6:BCL101
|
4.1
|
30.3
|
1.0
|
C2B
|
3:BCL101
|
4.2
|
31.6
|
1.0
|
C2D
|
6:BCL101
|
4.2
|
30.3
|
1.0
|
CG2
|
5:ILE26
|
4.3
|
22.7
|
1.0
|
C2C
|
6:BCL101
|
4.4
|
30.3
|
1.0
|
C3A
|
6:BCL101
|
4.4
|
30.3
|
1.0
|
C2A
|
6:BCL101
|
4.4
|
30.3
|
1.0
|
C3C
|
6:BCL101
|
4.4
|
30.3
|
1.0
|
CBB
|
3:BCL101
|
4.5
|
31.6
|
1.0
|
CAB
|
3:BCL101
|
4.5
|
31.6
|
1.0
|
C3B
|
3:BCL101
|
4.6
|
31.6
|
1.0
|
CBD
|
6:BCL101
|
4.8
|
30.3
|
1.0
|
CD1
|
5:ILE26
|
4.9
|
22.7
|
1.0
|
CMA
|
6:BCL101
|
4.9
|
30.3
|
1.0
|
CG
|
6:HIS44
|
5.0
|
28.1
|
1.0
|
ND1
|
6:HIS44
|
5.0
|
28.1
|
1.0
|
|
Reference:
X.Xu,
J.Xin.
Cryo-Em Structure of Carotenoid-Depleted Rc-Lh Complex From Roseiflexus Castenholzii To Be Published.
Page generated: Fri Oct 4 08:04:15 2024
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