Magnesium in PDB 8hm3: Complex of Ppiase-Bfubb

The structure of Complex of Ppiase-Bfubb, PDB code: 8hm3 was solved by J.H.Xu, Z.Chen, X.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.74 / 2.26
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	61.86, 100.92, 106.18, 90, 100.46, 90
R / Rfree (%)	21.4 / 26

The binding sites of Magnesium atom in the Complex of Ppiase-Bfubb (pdb code 8hm3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Complex of Ppiase-Bfubb, PDB code: 8hm3:

Magnesium binding site 1 out of 1 in the Complex of Ppiase-Bfubb


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Complex of Ppiase-Bfubb within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg502 b:30.0 occ:1.00 OD1 D:ASP446 2.2 43.8 1.0 O D:HOH729 2.3 50.8 1.0 O D:HOH767 2.3 42.6 1.0 O D:HOH626 2.4 43.7 1.0 O D:HOH613 2.5 33.5 1.0 CG D:ASP446 3.3 32.3 1.0 OD2 D:ASP446 3.6 42.1 1.0 O D:SER451 4.0 60.1 1.0 O D:HOH718 4.2 37.5 1.0 O D:HOH630 4.3 33.6 1.0 CA D:SER451 4.5 46.5 1.0 CB D:ASP446 4.6 31.6 1.0 O D:PHE447 4.6 31.3 1.0 C D:SER451 4.7 49.2 1.0 CA D:ASP446 4.8 34.4 1.0 CB D:SER451 4.9 63.2 1.0

J.H.Xu, Z.Chen, X.Gao. Bacteroides Fragilis Ubiquitin Homologue Drives Intraspecies Bacterial Competition in the Gut Microbiome Nat Microbiol.
ISSN: ESSN 2058-5276