Magnesium in PDB 8hmg: The Open State of RGLG2-Vwa
Enzymatic activity of The Open State of RGLG2-Vwa
All present enzymatic activity of The Open State of RGLG2-Vwa:
2.3.2.27;
Protein crystallography data
The structure of The Open State of RGLG2-Vwa, PDB code: 8hmg
was solved by
Q.Wang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
49.81 /
2.81
|
|
Space group
|
P 31
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
244.41,
244.41,
63.65,
90,
90,
120
|
|
R / Rfree (%)
|
18.3 /
20.8
|
Other elements in 8hmg:
The structure of The Open State of RGLG2-Vwa also contains other interesting chemical elements:
Magnesium Binding Sites:
The binding sites of Magnesium atom in the The Open State of RGLG2-Vwa
(pdb code 8hmg). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 9 binding sites of Magnesium where determined in the
The Open State of RGLG2-Vwa, PDB code: 8hmg:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
Magnesium binding site 1 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 1 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg404
b:57.9
occ:1.00
|
OG
|
A:SER132
|
2.1
|
58.5
|
1.0
|
|
OG1
|
A:THR224
|
2.1
|
52.3
|
1.0
|
|
OG1
|
A:THR130
|
2.1
|
51.2
|
1.0
|
|
O
|
A:HOH503
|
2.1
|
66.9
|
1.0
|
|
O
|
A:HOH512
|
2.1
|
51.3
|
1.0
|
|
OE1
|
D:GLU119
|
2.1
|
46.1
|
1.0
|
|
O
|
A:GLN254
|
2.9
|
46.5
|
1.0
|
|
CB
|
A:THR130
|
3.1
|
43.6
|
1.0
|
|
CD
|
D:GLU119
|
3.2
|
48.7
|
1.0
|
|
CB
|
A:THR224
|
3.2
|
48.6
|
1.0
|
|
CB
|
A:SER132
|
3.2
|
48.1
|
1.0
|
|
CG2
|
A:THR224
|
3.5
|
49.1
|
1.0
|
|
OE2
|
D:GLU119
|
3.5
|
49.8
|
1.0
|
|
CG2
|
A:THR130
|
3.7
|
44.1
|
1.0
|
|
C
|
A:GLN254
|
4.0
|
44.5
|
1.0
|
|
OD1
|
A:ASP252
|
4.1
|
54.2
|
1.0
|
|
N
|
A:SER132
|
4.1
|
46.1
|
1.0
|
|
CA
|
A:SER132
|
4.2
|
45.0
|
1.0
|
|
CB
|
A:GLN254
|
4.3
|
45.6
|
1.0
|
|
OD2
|
A:ASP128
|
4.3
|
57.7
|
1.0
|
|
CA
|
A:THR130
|
4.4
|
41.8
|
1.0
|
|
CA
|
A:THR224
|
4.5
|
45.4
|
1.0
|
|
OD1
|
A:ASP128
|
4.5
|
47.9
|
1.0
|
|
CG
|
D:GLU119
|
4.5
|
49.8
|
1.0
|
|
OD2
|
A:ASP252
|
4.5
|
43.1
|
1.0
|
|
CA
|
A:GLN254
|
4.6
|
43.8
|
1.0
|
|
C
|
A:THR130
|
4.7
|
42.5
|
1.0
|
|
CG
|
A:ASP252
|
4.7
|
47.3
|
1.0
|
|
CG
|
A:ASP128
|
4.8
|
47.2
|
1.0
|
|
N
|
A:LYS131
|
4.8
|
44.0
|
1.0
|
|
N
|
A:THR224
|
4.9
|
49.8
|
1.0
|
|
Magnesium binding site 2 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 2 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg404
b:64.6
occ:1.00
|
OG
|
B:SER132
|
2.1
|
61.3
|
1.0
|
|
OG1
|
B:THR130
|
2.1
|
55.9
|
1.0
|
|
O
|
B:HOH501
|
2.1
|
80.7
|
1.0
|
|
O
|
B:HOH502
|
2.1
|
56.1
|
1.0
|
|
OG1
|
B:THR224
|
2.1
|
56.1
|
1.0
|
|
OE1
|
I:GLU119
|
2.1
|
68.8
|
1.0
|
|
O
|
B:GLN254
|
2.9
|
64.7
|
1.0
|
|
CB
|
B:THR130
|
3.1
|
55.3
|
1.0
|
|
CB
|
B:THR224
|
3.2
|
52.3
|
1.0
|
|
CD
|
I:GLU119
|
3.2
|
71.9
|
1.0
|
|
CB
|
B:SER132
|
3.3
|
54.5
|
1.0
|
|
CG2
|
B:THR224
|
3.4
|
58.6
|
1.0
|
|
OE2
|
I:GLU119
|
3.7
|
83.3
|
1.0
|
|
CG2
|
B:THR130
|
3.7
|
55.5
|
1.0
|
|
C
|
B:GLN254
|
4.0
|
54.6
|
1.0
|
|
OD1
|
B:ASP252
|
4.0
|
67.8
|
1.0
|
|
N
|
B:SER132
|
4.2
|
49.4
|
1.0
|
|
OD2
|
B:ASP128
|
4.2
|
49.6
|
1.0
|
|
CB
|
B:GLN254
|
4.3
|
59.5
|
1.0
|
|
CA
|
B:SER132
|
4.3
|
52.3
|
1.0
|
|
OD2
|
B:ASP252
|
4.4
|
58.8
|
1.0
|
|
OD1
|
B:ASP128
|
4.4
|
53.4
|
1.0
|
|
CA
|
B:THR130
|
4.4
|
52.2
|
1.0
|
|
CA
|
B:THR224
|
4.5
|
52.1
|
1.0
|
|
CG
|
I:GLU119
|
4.5
|
67.2
|
1.0
|
|
CA
|
B:GLN254
|
4.6
|
59.2
|
1.0
|
|
CG
|
B:ASP252
|
4.6
|
64.1
|
1.0
|
|
C
|
B:THR130
|
4.7
|
52.0
|
1.0
|
|
CG
|
B:ASP128
|
4.7
|
52.2
|
1.0
|
|
N
|
B:LYS131
|
4.9
|
56.2
|
1.0
|
|
N
|
B:THR224
|
4.9
|
52.1
|
1.0
|
|
N
|
B:GLN254
|
5.0
|
56.6
|
1.0
|
|
Magnesium binding site 3 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 3 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg404
b:50.1
occ:1.00
|
OG1
|
C:THR130
|
2.1
|
46.6
|
1.0
|
|
O
|
C:HOH502
|
2.1
|
64.2
|
1.0
|
|
OG
|
C:SER132
|
2.1
|
53.8
|
1.0
|
|
O
|
C:HOH505
|
2.1
|
49.6
|
1.0
|
|
OG1
|
C:THR224
|
2.1
|
48.1
|
1.0
|
|
OE1
|
B:GLU119
|
2.7
|
43.8
|
1.0
|
|
O
|
C:GLN254
|
2.8
|
48.3
|
1.0
|
|
CB
|
C:THR224
|
3.1
|
44.5
|
1.0
|
|
CB
|
C:THR130
|
3.1
|
41.6
|
1.0
|
|
CG2
|
C:THR224
|
3.3
|
48.8
|
1.0
|
|
CB
|
C:SER132
|
3.4
|
45.1
|
1.0
|
|
CD
|
B:GLU119
|
3.5
|
53.1
|
1.0
|
|
CG2
|
C:THR130
|
3.7
|
42.8
|
1.0
|
|
OE2
|
B:GLU119
|
3.7
|
57.9
|
1.0
|
|
OD1
|
C:ASP252
|
3.9
|
53.1
|
1.0
|
|
C
|
C:GLN254
|
3.9
|
41.5
|
1.0
|
|
OD2
|
C:ASP128
|
4.0
|
71.0
|
1.0
|
|
CB
|
C:GLN254
|
4.2
|
50.0
|
1.0
|
|
OD1
|
C:ASP128
|
4.3
|
62.0
|
1.0
|
|
N
|
C:SER132
|
4.3
|
45.0
|
1.0
|
|
OD2
|
C:ASP252
|
4.4
|
47.0
|
1.0
|
|
CA
|
C:SER132
|
4.4
|
44.7
|
1.0
|
|
CA
|
C:THR224
|
4.4
|
44.6
|
1.0
|
|
CA
|
C:THR130
|
4.5
|
42.0
|
1.0
|
|
CA
|
C:GLN254
|
4.5
|
46.3
|
1.0
|
|
CG
|
C:ASP252
|
4.5
|
53.3
|
1.0
|
|
CG
|
C:ASP128
|
4.6
|
57.7
|
1.0
|
|
C
|
C:THR130
|
4.8
|
44.5
|
1.0
|
|
N
|
C:GLN254
|
4.8
|
47.4
|
1.0
|
|
N
|
C:VAL255
|
4.9
|
40.6
|
1.0
|
|
CG
|
B:GLU119
|
4.9
|
59.7
|
1.0
|
|
N
|
C:THR224
|
4.9
|
48.3
|
1.0
|
|
Magnesium binding site 4 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 4 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg404
b:73.7
occ:1.00
|
OG1
|
D:THR224
|
2.1
|
57.9
|
1.0
|
|
OG1
|
D:THR130
|
2.1
|
57.2
|
1.0
|
|
OG
|
D:SER132
|
2.1
|
70.5
|
1.0
|
|
O
|
D:HOH502
|
2.1
|
107.4
|
1.0
|
|
O
|
D:HOH506
|
2.1
|
63.3
|
1.0
|
|
OE1
|
H:GLU119
|
2.1
|
76.2
|
1.0
|
|
O
|
D:GLN254
|
2.9
|
70.2
|
1.0
|
|
CB
|
D:THR130
|
3.1
|
56.6
|
1.0
|
|
CB
|
D:THR224
|
3.2
|
59.1
|
1.0
|
|
CD
|
H:GLU119
|
3.2
|
79.4
|
1.0
|
|
CB
|
D:SER132
|
3.3
|
57.8
|
1.0
|
|
CG2
|
D:THR224
|
3.4
|
63.6
|
1.0
|
|
OE2
|
H:GLU119
|
3.6
|
68.8
|
1.0
|
|
CG2
|
D:THR130
|
3.7
|
54.9
|
1.0
|
|
C
|
D:GLN254
|
4.0
|
63.7
|
1.0
|
|
OD1
|
D:ASP252
|
4.1
|
56.1
|
1.0
|
|
N
|
D:SER132
|
4.1
|
53.9
|
1.0
|
|
OD2
|
D:ASP128
|
4.2
|
71.7
|
1.0
|
|
CA
|
D:SER132
|
4.3
|
58.4
|
1.0
|
|
CB
|
D:GLN254
|
4.3
|
66.1
|
1.0
|
|
CA
|
D:THR130
|
4.4
|
52.0
|
1.0
|
|
OD1
|
D:ASP128
|
4.4
|
60.0
|
1.0
|
|
CA
|
D:THR224
|
4.4
|
56.6
|
1.0
|
|
OD2
|
D:ASP252
|
4.4
|
68.5
|
1.0
|
|
CG
|
H:GLU119
|
4.5
|
79.3
|
1.0
|
|
CA
|
D:GLN254
|
4.6
|
65.5
|
1.0
|
|
CG
|
D:ASP252
|
4.7
|
67.6
|
1.0
|
|
C
|
D:THR130
|
4.7
|
53.4
|
1.0
|
|
CG
|
D:ASP128
|
4.8
|
63.0
|
1.0
|
|
N
|
D:THR224
|
4.9
|
61.3
|
1.0
|
|
N
|
D:LYS131
|
4.9
|
62.7
|
1.0
|
|
Magnesium binding site 5 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 5 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg404
b:67.4
occ:1.00
|
OG
|
E:SER132
|
2.1
|
57.1
|
1.0
|
|
OG1
|
E:THR224
|
2.1
|
57.8
|
1.0
|
|
O
|
E:HOH501
|
2.1
|
78.4
|
1.0
|
|
OG1
|
E:THR130
|
2.1
|
61.9
|
1.0
|
|
O
|
E:HOH504
|
2.1
|
68.4
|
1.0
|
|
OE1
|
G:GLU119
|
2.1
|
65.8
|
1.0
|
|
O
|
E:GLN254
|
2.8
|
73.7
|
1.0
|
|
CB
|
E:THR130
|
3.1
|
53.8
|
1.0
|
|
CD
|
G:GLU119
|
3.2
|
66.2
|
1.0
|
|
CB
|
E:THR224
|
3.2
|
57.4
|
1.0
|
|
CB
|
E:SER132
|
3.3
|
47.6
|
1.0
|
|
CG2
|
E:THR224
|
3.5
|
61.9
|
1.0
|
|
OE2
|
G:GLU119
|
3.7
|
58.9
|
1.0
|
|
CG2
|
E:THR130
|
3.7
|
52.1
|
1.0
|
|
C
|
E:GLN254
|
4.0
|
64.3
|
1.0
|
|
OD1
|
E:ASP252
|
4.1
|
56.6
|
1.0
|
|
N
|
E:SER132
|
4.1
|
46.1
|
1.0
|
|
CB
|
E:GLN254
|
4.2
|
61.6
|
1.0
|
|
CA
|
E:SER132
|
4.3
|
48.0
|
1.0
|
|
OD2
|
E:ASP128
|
4.3
|
73.7
|
1.0
|
|
CA
|
E:THR130
|
4.4
|
53.2
|
1.0
|
|
OD2
|
E:ASP252
|
4.5
|
61.7
|
1.0
|
|
CG
|
G:GLU119
|
4.5
|
68.9
|
1.0
|
|
OD1
|
E:ASP128
|
4.5
|
69.0
|
1.0
|
|
CA
|
E:THR224
|
4.5
|
55.8
|
1.0
|
|
CA
|
E:GLN254
|
4.6
|
66.6
|
1.0
|
|
CG
|
E:ASP252
|
4.7
|
59.7
|
1.0
|
|
C
|
E:THR130
|
4.7
|
55.3
|
1.0
|
|
CG
|
E:ASP128
|
4.8
|
60.9
|
1.0
|
|
N
|
E:LYS131
|
4.9
|
59.6
|
1.0
|
|
N
|
E:THR224
|
4.9
|
60.2
|
1.0
|
|
Magnesium binding site 6 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 6 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg404
b:60.9
occ:1.00
|
OG
|
F:SER132
|
2.0
|
56.4
|
1.0
|
|
OG1
|
F:THR224
|
2.1
|
55.5
|
1.0
|
|
OG1
|
F:THR130
|
2.1
|
70.8
|
1.0
|
|
O
|
F:HOH508
|
2.1
|
63.2
|
1.0
|
|
O
|
E:HOH502
|
2.1
|
84.8
|
1.0
|
|
OE1
|
E:GLU119
|
2.1
|
59.8
|
1.0
|
|
O
|
F:GLN254
|
2.9
|
70.2
|
1.0
|
|
CB
|
F:THR130
|
3.1
|
61.8
|
1.0
|
|
CD
|
E:GLU119
|
3.1
|
65.7
|
1.0
|
|
CB
|
F:THR224
|
3.2
|
54.5
|
1.0
|
|
CB
|
F:SER132
|
3.2
|
51.5
|
1.0
|
|
OE2
|
E:GLU119
|
3.5
|
65.4
|
1.0
|
|
CG2
|
F:THR224
|
3.5
|
60.6
|
1.0
|
|
CG2
|
F:THR130
|
3.7
|
53.0
|
1.0
|
|
N
|
F:SER132
|
4.1
|
52.4
|
1.0
|
|
C
|
F:GLN254
|
4.1
|
54.6
|
1.0
|
|
OD1
|
F:ASP252
|
4.1
|
50.4
|
1.0
|
|
CA
|
F:SER132
|
4.2
|
54.4
|
1.0
|
|
CB
|
F:GLN254
|
4.3
|
63.9
|
1.0
|
|
OD2
|
F:ASP128
|
4.4
|
80.7
|
1.0
|
|
CA
|
F:THR130
|
4.4
|
65.1
|
1.0
|
|
CG
|
E:GLU119
|
4.4
|
69.3
|
1.0
|
|
CA
|
F:THR224
|
4.5
|
54.0
|
1.0
|
|
OD2
|
F:ASP252
|
4.5
|
56.6
|
1.0
|
|
OD1
|
F:ASP128
|
4.5
|
76.0
|
1.0
|
|
C
|
F:THR130
|
4.6
|
62.0
|
1.0
|
|
CA
|
F:GLN254
|
4.7
|
64.3
|
1.0
|
|
CG
|
F:ASP252
|
4.7
|
57.9
|
1.0
|
|
N
|
F:LYS131
|
4.8
|
56.5
|
1.0
|
|
N
|
F:THR224
|
4.8
|
56.2
|
1.0
|
|
CG
|
F:ASP128
|
4.9
|
65.6
|
1.0
|
|
Magnesium binding site 7 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 7 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg404
b:80.8
occ:1.00
|
O
|
G:HOH504
|
2.1
|
90.0
|
1.0
|
|
OG1
|
G:THR224
|
2.2
|
71.6
|
1.0
|
|
OG
|
G:SER132
|
2.2
|
80.1
|
1.0
|
|
OG1
|
G:THR130
|
2.3
|
71.0
|
1.0
|
|
O
|
G:GLN254
|
2.4
|
66.7
|
1.0
|
|
CB
|
G:THR224
|
3.1
|
60.9
|
1.0
|
|
CG2
|
G:THR224
|
3.2
|
62.6
|
1.0
|
|
CB
|
G:SER132
|
3.4
|
73.4
|
1.0
|
|
CB
|
G:THR130
|
3.4
|
67.3
|
1.0
|
|
C
|
G:GLN254
|
3.5
|
64.2
|
1.0
|
|
OD1
|
G:ASP252
|
3.8
|
89.6
|
1.0
|
|
CB
|
G:GLN254
|
3.9
|
77.8
|
1.0
|
|
CG2
|
G:THR130
|
3.9
|
66.2
|
1.0
|
|
OD2
|
G:ASP128
|
4.1
|
87.3
|
1.0
|
|
CA
|
G:GLN254
|
4.1
|
73.0
|
1.0
|
|
OD2
|
G:ASP252
|
4.4
|
79.5
|
1.0
|
|
CA
|
G:THR224
|
4.5
|
61.1
|
1.0
|
|
CG
|
G:ASP252
|
4.5
|
86.2
|
1.0
|
|
OD1
|
G:ASP128
|
4.5
|
84.7
|
1.0
|
|
N
|
G:SER132
|
4.5
|
71.8
|
1.0
|
|
N
|
G:GLN254
|
4.5
|
74.3
|
1.0
|
|
CA
|
G:SER132
|
4.5
|
69.1
|
1.0
|
|
N
|
G:VAL255
|
4.5
|
61.2
|
1.0
|
|
CG
|
G:ASP128
|
4.7
|
77.7
|
1.0
|
|
CA
|
G:THR130
|
4.8
|
67.7
|
1.0
|
|
CA
|
G:VAL255
|
5.0
|
61.7
|
1.0
|
|
N
|
G:THR224
|
5.0
|
62.3
|
1.0
|
|
Magnesium binding site 8 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 8 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Mg404
b:67.9
occ:1.00
|
O
|
H:HOH502
|
2.1
|
78.7
|
1.0
|
|
OG1
|
H:THR224
|
2.1
|
59.9
|
1.0
|
|
OG
|
H:SER132
|
2.2
|
69.2
|
1.0
|
|
OG1
|
H:THR130
|
2.3
|
50.8
|
1.0
|
|
O
|
H:GLN254
|
2.4
|
62.0
|
1.0
|
|
CB
|
H:THR224
|
3.1
|
58.2
|
1.0
|
|
CG2
|
H:THR224
|
3.3
|
69.2
|
1.0
|
|
CB
|
H:SER132
|
3.4
|
59.0
|
1.0
|
|
CB
|
H:THR130
|
3.4
|
50.4
|
1.0
|
|
C
|
H:GLN254
|
3.5
|
56.7
|
1.0
|
|
OD1
|
H:ASP252
|
3.8
|
74.9
|
1.0
|
|
CB
|
H:GLN254
|
3.9
|
62.4
|
1.0
|
|
CG2
|
H:THR130
|
3.9
|
51.2
|
1.0
|
|
OD2
|
H:ASP128
|
4.1
|
61.3
|
1.0
|
|
CA
|
H:GLN254
|
4.2
|
61.6
|
1.0
|
|
OD2
|
H:ASP252
|
4.4
|
73.3
|
1.0
|
|
CG
|
H:ASP252
|
4.5
|
67.8
|
1.0
|
|
CA
|
H:THR224
|
4.5
|
54.3
|
1.0
|
|
OD1
|
H:ASP128
|
4.5
|
60.4
|
1.0
|
|
N
|
H:SER132
|
4.5
|
51.4
|
1.0
|
|
CA
|
H:SER132
|
4.5
|
55.6
|
1.0
|
|
N
|
H:VAL255
|
4.6
|
52.9
|
1.0
|
|
N
|
H:GLN254
|
4.6
|
59.4
|
1.0
|
|
CG
|
H:ASP128
|
4.7
|
54.5
|
1.0
|
|
CA
|
H:THR130
|
4.8
|
52.0
|
1.0
|
|
N
|
H:THR224
|
5.0
|
51.4
|
1.0
|
|
Magnesium binding site 9 out
of 9 in 8hmg
Go back to
Magnesium Binding Sites List in 8hmg
Magnesium binding site 9 out
of 9 in the The Open State of RGLG2-Vwa
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of The Open State of RGLG2-Vwa within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Mg404
b:64.6
occ:1.00
|
OG
|
I:SER132
|
2.1
|
64.8
|
1.0
|
|
OG1
|
I:THR130
|
2.1
|
51.5
|
1.0
|
|
OG1
|
I:THR224
|
2.1
|
57.4
|
1.0
|
|
O
|
I:HOH501
|
2.1
|
55.1
|
1.0
|
|
O
|
I:GLN254
|
2.8
|
58.3
|
1.0
|
|
CB
|
I:THR224
|
3.2
|
53.8
|
1.0
|
|
CB
|
I:THR130
|
3.2
|
49.7
|
1.0
|
|
CG2
|
I:THR224
|
3.3
|
59.8
|
1.0
|
|
CB
|
I:SER132
|
3.3
|
56.4
|
1.0
|
|
CG2
|
I:THR130
|
3.7
|
51.0
|
1.0
|
|
OD1
|
I:ASP252
|
3.8
|
65.7
|
1.0
|
|
C
|
I:GLN254
|
3.9
|
60.0
|
1.0
|
|
OD2
|
I:ASP128
|
4.0
|
64.8
|
1.0
|
|
CB
|
I:GLN254
|
4.2
|
65.3
|
1.0
|
|
N
|
I:SER132
|
4.3
|
52.8
|
1.0
|
|
OD1
|
I:ASP128
|
4.3
|
69.9
|
1.0
|
|
OD2
|
I:ASP252
|
4.3
|
65.1
|
1.0
|
|
CA
|
I:SER132
|
4.4
|
54.6
|
1.0
|
|
CA
|
I:THR224
|
4.5
|
54.0
|
1.0
|
|
CG
|
I:ASP252
|
4.5
|
66.7
|
1.0
|
|
CA
|
I:THR130
|
4.5
|
52.3
|
1.0
|
|
CA
|
I:GLN254
|
4.5
|
63.6
|
1.0
|
|
CG
|
I:ASP128
|
4.6
|
58.5
|
1.0
|
|
C
|
I:THR130
|
4.8
|
56.5
|
1.0
|
|
N
|
I:GLN254
|
4.8
|
61.6
|
1.0
|
|
N
|
I:VAL255
|
4.9
|
54.5
|
1.0
|
|
N
|
I:THR224
|
5.0
|
54.0
|
1.0
|
|
Reference:
Q.Wang,
Q.Wang.
N/A N/A.
Page generated: Fri Oct 4 08:04:50 2024
|
