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Magnesium in PDB 8hq4: B27 in Complex with CRM1-Ran-RANBP1

Protein crystallography data

The structure of B27 in Complex with CRM1-Ran-RANBP1, PDB code: 8hq4 was solved by Y.Lei, Q.Sun, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.06 / 2.12
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 106.08, 106.08, 304, 90, 90, 90
R / Rfree (%) 18.7 / 21

Other elements in 8hq4:

The structure of B27 in Complex with CRM1-Ran-RANBP1 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Fluorine (F) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the B27 in Complex with CRM1-Ran-RANBP1 (pdb code 8hq4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the B27 in Complex with CRM1-Ran-RANBP1, PDB code: 8hq4:

Magnesium binding site 1 out of 1 in 8hq4

Go back to Magnesium Binding Sites List in 8hq4
Magnesium binding site 1 out of 1 in the B27 in Complex with CRM1-Ran-RANBP1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of B27 in Complex with CRM1-Ran-RANBP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:42.2
occ:1.00
O1G A:GTP303 2.0 20.0 1.0
O2B A:GTP303 2.0 20.0 1.0
O A:HOH412 2.1 37.9 1.0
OG1 A:THR24 2.1 38.9 1.0
O A:HOH453 2.1 44.1 1.0
OG1 A:THR42 2.2 40.4 1.0
CB A:THR24 3.1 40.7 1.0
CB A:THR42 3.1 42.7 1.0
PG A:GTP303 3.2 20.0 1.0
PB A:GTP303 3.2 20.0 1.0
O3B A:GTP303 3.3 20.0 1.0
N A:THR42 3.7 43.7 1.0
O2G A:GTP303 3.9 20.0 1.0
N A:THR24 3.9 39.0 1.0
CA A:THR42 4.0 43.9 1.0
OD1 A:ASP65 4.1 43.1 1.0
CA A:THR24 4.1 40.4 1.0
OD2 A:ASP65 4.1 48.2 1.0
CG2 A:THR24 4.1 41.3 1.0
O3A A:GTP303 4.3 20.0 1.0
O1B A:GTP303 4.3 20.0 1.0
CG2 A:THR42 4.3 43.7 1.0
O A:HOH421 4.3 51.2 1.0
O2A A:GTP303 4.3 20.0 1.0
O3G A:GTP303 4.4 20.0 1.0
CG A:ASP65 4.5 44.6 1.0
O1A A:GTP303 4.5 20.0 1.0
PA A:GTP303 4.6 20.0 1.0
O A:THR66 4.6 41.1 1.0
O A:VAL40 4.7 46.3 1.0
C A:ALA41 4.8 45.3 1.0
CB A:LYS23 4.8 40.0 1.0
C A:LYS23 5.0 39.6 1.0

Reference:

Y.Lei, Q.Sun. B27 in Complex with CRM1-Ran-RANBP1 To Be Published.
Page generated: Thu Dec 28 09:16:53 2023

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