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Magnesium in PDB 8i9o: Ecctps Filament Bound with Ctp, Nadh, Don

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ecctps Filament Bound with Ctp, Nadh, Don (pdb code 8i9o). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Ecctps Filament Bound with Ctp, Nadh, Don, PDB code: 8i9o:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 8i9o

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Magnesium binding site 1 out of 4 in the Ecctps Filament Bound with Ctp, Nadh, Don


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ecctps Filament Bound with Ctp, Nadh, Don within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg704

b:5.6
occ:1.00
O2B A:CTP703 2.1 25.9 1.0
O1A A:CTP703 2.3 9.2 1.0
O1G A:CTP703 2.8 23.1 1.0
PB A:CTP703 3.4 10.5 1.0
PA A:CTP703 3.6 12.5 1.0
O3A A:CTP703 3.8 15.1 1.0
PG A:CTP703 3.9 2.3 1.0
O3B A:CTP703 4.0 14.9 1.0
NZ A:LYS223 4.0 14.1 1.0
O5' A:CTP703 4.3 17.2 1.0
NZ A:LYS187 4.5 17.4 1.0
O2G A:CTP703 4.5 17.1 1.0
O1B A:CTP703 4.5 15.8 1.0
C5' A:CTP703 4.7 13.9 1.0
O2A A:CTP703 4.7 19.5 1.0

Magnesium binding site 2 out of 4 in 8i9o

Go back to Magnesium Binding Sites List in 8i9o
Magnesium binding site 2 out of 4 in the Ecctps Filament Bound with Ctp, Nadh, Don


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Ecctps Filament Bound with Ctp, Nadh, Don within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:5.4
occ:1.00
O2B B:CTP601 2.1 25.7 1.0
O1A B:CTP601 2.3 8.6 1.0
O1G B:CTP601 2.8 22.1 1.0
PB B:CTP601 3.4 10.7 1.0
PA B:CTP601 3.6 11.8 1.0
O3A B:CTP601 3.8 15.2 1.0
PG B:CTP601 3.9 3.0 1.0
O3B B:CTP601 4.0 15.2 1.0
NZ B:LYS223 4.0 13.7 1.0
O5' B:CTP601 4.3 17.4 1.0
NZ B:LYS187 4.5 17.4 1.0
O2G B:CTP601 4.5 17.2 1.0
O1B B:CTP601 4.5 15.7 1.0
C5' B:CTP601 4.7 14.1 1.0
O2A B:CTP601 4.7 18.7 1.0

Magnesium binding site 3 out of 4 in 8i9o

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Magnesium binding site 3 out of 4 in the Ecctps Filament Bound with Ctp, Nadh, Don


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Ecctps Filament Bound with Ctp, Nadh, Don within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg704

b:4.6
occ:1.00
O2B C:CTP703 2.1 25.5 1.0
O1A C:CTP703 2.3 9.5 1.0
O1G C:CTP703 2.8 22.3 1.0
PB C:CTP703 3.4 10.6 1.0
PA C:CTP703 3.6 12.7 1.0
O3A C:CTP703 3.8 15.7 1.0
PG C:CTP703 3.9 2.1 1.0
O3B C:CTP703 4.0 15.7 1.0
NZ C:LYS223 4.0 13.5 1.0
O5' C:CTP703 4.3 17.1 1.0
NZ C:LYS187 4.5 18.2 1.0
O2G C:CTP703 4.5 16.4 1.0
O1B C:CTP703 4.5 15.8 1.0
C5' C:CTP703 4.7 13.8 1.0
O2A C:CTP703 4.7 19.4 1.0

Magnesium binding site 4 out of 4 in 8i9o

Go back to Magnesium Binding Sites List in 8i9o
Magnesium binding site 4 out of 4 in the Ecctps Filament Bound with Ctp, Nadh, Don


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Ecctps Filament Bound with Ctp, Nadh, Don within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg602

b:4.9
occ:1.00
O2B D:CTP601 2.1 25.6 1.0
O1A D:CTP601 2.3 8.5 1.0
O1G D:CTP601 2.8 22.5 1.0
PB D:CTP601 3.4 10.5 1.0
PA D:CTP601 3.6 11.2 1.0
O3A D:CTP601 3.8 14.9 1.0
PG D:CTP601 3.9 1.6 1.0
O3B D:CTP601 4.0 14.5 1.0
NZ D:LYS223 4.0 13.6 1.0
O5' D:CTP601 4.3 17.5 1.0
NZ D:LYS187 4.5 16.9 1.0
O2G D:CTP601 4.5 16.6 1.0
O1B D:CTP601 4.5 15.2 1.0
C5' D:CTP601 4.7 14.0 1.0
O2A D:CTP601 4.7 19.3 1.0

Reference:

C.J.Guo, J.L.Liu. Filamentation and Inhibition of Prokaryotic Ctp Synthase To Be Published.
Page generated: Fri Oct 4 09:17:54 2024

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