Magnesium in PDB 8iug: Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Other elements in 8iug:
The structure of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii also contains other interesting chemical elements:
Magnesium Binding Sites:
Magnesium binding site 1 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 1 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
0:Mg101
b:43.0
occ:1.00
|
MG
|
0:BCL101
|
0.0
|
43.0
|
1.0
|
NC
|
0:BCL101
|
2.0
|
43.0
|
1.0
|
NA
|
0:BCL101
|
2.0
|
43.0
|
1.0
|
ND
|
0:BCL101
|
2.0
|
43.0
|
1.0
|
NB
|
0:BCL101
|
2.0
|
43.0
|
1.0
|
NE2
|
0:HIS44
|
2.5
|
41.2
|
1.0
|
C4D
|
0:BCL101
|
3.0
|
43.0
|
1.0
|
C4C
|
0:BCL101
|
3.0
|
43.0
|
1.0
|
C1A
|
0:BCL101
|
3.0
|
43.0
|
1.0
|
C4A
|
0:BCL101
|
3.0
|
43.0
|
1.0
|
C1C
|
0:BCL101
|
3.0
|
43.0
|
1.0
|
C1B
|
0:BCL101
|
3.0
|
43.0
|
1.0
|
C4B
|
0:BCL101
|
3.1
|
43.0
|
1.0
|
C1D
|
0:BCL101
|
3.1
|
43.0
|
1.0
|
CE1
|
0:HIS44
|
3.3
|
41.2
|
1.0
|
CHB
|
0:BCL101
|
3.3
|
43.0
|
1.0
|
CHC
|
0:BCL101
|
3.4
|
43.0
|
1.0
|
CHA
|
0:BCL101
|
3.4
|
43.0
|
1.0
|
CHD
|
0:BCL101
|
3.5
|
43.0
|
1.0
|
CD2
|
0:HIS44
|
3.5
|
41.2
|
1.0
|
C3D
|
0:BCL101
|
4.2
|
43.0
|
1.0
|
CMB
|
7:BCL101
|
4.2
|
44.1
|
1.0
|
CBB
|
7:BCL101
|
4.3
|
44.1
|
1.0
|
C2A
|
0:BCL101
|
4.3
|
43.0
|
1.0
|
C3A
|
0:BCL101
|
4.3
|
43.0
|
1.0
|
C2C
|
0:BCL101
|
4.3
|
43.0
|
1.0
|
C3C
|
0:BCL101
|
4.3
|
43.0
|
1.0
|
C2D
|
0:BCL101
|
4.4
|
43.0
|
1.0
|
C2B
|
0:BCL101
|
4.4
|
43.0
|
1.0
|
C3B
|
0:BCL101
|
4.4
|
43.0
|
1.0
|
ND1
|
0:HIS44
|
4.5
|
41.2
|
1.0
|
CG
|
0:HIS44
|
4.6
|
41.2
|
1.0
|
C2B
|
7:BCL101
|
4.9
|
44.1
|
1.0
|
CBD
|
0:BCL101
|
4.9
|
43.0
|
1.0
|
CAA
|
0:BCL101
|
4.9
|
43.0
|
1.0
|
|
Magnesium binding site 2 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 2 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
0:Mg102
b:54.6
occ:1.00
|
MG
|
0:BCL102
|
0.0
|
54.6
|
1.0
|
NC
|
0:BCL102
|
2.0
|
54.6
|
1.0
|
NA
|
0:BCL102
|
2.0
|
54.6
|
1.0
|
ND
|
0:BCL102
|
2.0
|
54.6
|
1.0
|
NB
|
0:BCL102
|
2.0
|
54.6
|
1.0
|
NE2
|
0:HIS26
|
2.4
|
53.8
|
1.0
|
C4D
|
0:BCL102
|
2.9
|
54.6
|
1.0
|
C4A
|
0:BCL102
|
2.9
|
54.6
|
1.0
|
C4C
|
0:BCL102
|
3.0
|
54.6
|
1.0
|
C1C
|
0:BCL102
|
3.0
|
54.6
|
1.0
|
C1A
|
0:BCL102
|
3.0
|
54.6
|
1.0
|
C1B
|
0:BCL102
|
3.0
|
54.6
|
1.0
|
C4B
|
0:BCL102
|
3.1
|
54.6
|
1.0
|
C1D
|
0:BCL102
|
3.2
|
54.6
|
1.0
|
CHB
|
0:BCL102
|
3.3
|
54.6
|
1.0
|
CE1
|
0:HIS26
|
3.4
|
53.8
|
1.0
|
CHC
|
0:BCL102
|
3.4
|
54.6
|
1.0
|
CD2
|
0:HIS26
|
3.4
|
53.8
|
1.0
|
CHA
|
0:BCL102
|
3.4
|
54.6
|
1.0
|
CHD
|
0:BCL102
|
3.5
|
54.6
|
1.0
|
C3D
|
0:BCL102
|
4.2
|
54.6
|
1.0
|
C3A
|
0:BCL102
|
4.3
|
54.6
|
1.0
|
C2A
|
0:BCL102
|
4.3
|
54.6
|
1.0
|
C3C
|
0:BCL102
|
4.3
|
54.6
|
1.0
|
C2C
|
0:BCL102
|
4.3
|
54.6
|
1.0
|
C2B
|
0:BCL102
|
4.4
|
54.6
|
1.0
|
C2D
|
0:BCL102
|
4.4
|
54.6
|
1.0
|
C3B
|
0:BCL102
|
4.4
|
54.6
|
1.0
|
ND1
|
0:HIS26
|
4.5
|
53.8
|
1.0
|
CG
|
0:HIS26
|
4.5
|
53.8
|
1.0
|
CAE
|
0:U42103
|
4.6
|
13.3
|
1.0
|
CBD
|
0:BCL102
|
4.9
|
54.6
|
1.0
|
CAI
|
0:U42103
|
5.0
|
13.3
|
1.0
|
CAC
|
0:U42103
|
5.0
|
13.3
|
1.0
|
|
Magnesium binding site 3 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 3 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg101
b:52.1
occ:1.00
|
MG
|
1:BCL101
|
0.0
|
52.1
|
1.0
|
NA
|
1:BCL101
|
2.0
|
52.1
|
1.0
|
NC
|
1:BCL101
|
2.0
|
52.1
|
1.0
|
ND
|
1:BCL101
|
2.0
|
52.1
|
1.0
|
NB
|
1:BCL101
|
2.0
|
52.1
|
1.0
|
C4D
|
1:BCL101
|
2.9
|
52.1
|
1.0
|
C4A
|
1:BCL101
|
3.0
|
52.1
|
1.0
|
C1A
|
1:BCL101
|
3.0
|
52.1
|
1.0
|
C4C
|
1:BCL101
|
3.0
|
52.1
|
1.0
|
C1C
|
1:BCL101
|
3.0
|
52.1
|
1.0
|
C1B
|
1:BCL101
|
3.0
|
52.1
|
1.0
|
NE2
|
1:HIS27
|
3.1
|
45.9
|
1.0
|
C4B
|
1:BCL101
|
3.1
|
52.1
|
1.0
|
C1D
|
1:BCL101
|
3.1
|
52.1
|
1.0
|
CHB
|
1:BCL101
|
3.3
|
52.1
|
1.0
|
CHC
|
1:BCL101
|
3.4
|
52.1
|
1.0
|
CHA
|
1:BCL101
|
3.4
|
52.1
|
1.0
|
CHD
|
1:BCL101
|
3.5
|
52.1
|
1.0
|
CE1
|
1:HIS27
|
3.9
|
45.9
|
1.0
|
CD2
|
1:HIS27
|
4.1
|
45.9
|
1.0
|
C3D
|
1:BCL101
|
4.2
|
52.1
|
1.0
|
CBB
|
4:BCL102
|
4.2
|
49.0
|
1.0
|
C3A
|
1:BCL101
|
4.3
|
52.1
|
1.0
|
C2A
|
1:BCL101
|
4.3
|
52.1
|
1.0
|
C3C
|
1:BCL101
|
4.3
|
52.1
|
1.0
|
C2C
|
1:BCL101
|
4.3
|
52.1
|
1.0
|
C2B
|
1:BCL101
|
4.4
|
52.1
|
1.0
|
CMB
|
4:BCL102
|
4.4
|
49.0
|
1.0
|
C2D
|
1:BCL101
|
4.4
|
52.1
|
1.0
|
C3B
|
1:BCL101
|
4.4
|
52.1
|
1.0
|
CBO
|
4:U42101
|
4.5
|
14.4
|
1.0
|
CBK
|
4:U42101
|
4.9
|
14.4
|
1.0
|
CBM
|
4:U42101
|
4.9
|
14.4
|
1.0
|
CBD
|
1:BCL101
|
4.9
|
52.1
|
1.0
|
C2B
|
4:BCL102
|
5.0
|
49.0
|
1.0
|
|
Magnesium binding site 4 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 4 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg101
b:51.5
occ:1.00
|
MG
|
2:BCL101
|
0.0
|
51.5
|
1.0
|
NA
|
2:BCL101
|
2.0
|
51.5
|
1.0
|
NC
|
2:BCL101
|
2.0
|
51.5
|
1.0
|
ND
|
2:BCL101
|
2.0
|
51.5
|
1.0
|
NB
|
2:BCL101
|
2.0
|
51.5
|
1.0
|
NE2
|
2:HIS44
|
2.3
|
50.3
|
1.0
|
C4D
|
2:BCL101
|
2.9
|
51.5
|
1.0
|
C4A
|
2:BCL101
|
3.0
|
51.5
|
1.0
|
C1A
|
2:BCL101
|
3.0
|
51.5
|
1.0
|
C4C
|
2:BCL101
|
3.0
|
51.5
|
1.0
|
C1C
|
2:BCL101
|
3.0
|
51.5
|
1.0
|
C1B
|
2:BCL101
|
3.0
|
51.5
|
1.0
|
C4B
|
2:BCL101
|
3.1
|
51.5
|
1.0
|
CE1
|
2:HIS44
|
3.1
|
50.3
|
1.0
|
C1D
|
2:BCL101
|
3.1
|
51.5
|
1.0
|
CHB
|
2:BCL101
|
3.3
|
51.5
|
1.0
|
CHC
|
2:BCL101
|
3.4
|
51.5
|
1.0
|
CHA
|
2:BCL101
|
3.4
|
51.5
|
1.0
|
CD2
|
2:HIS44
|
3.4
|
50.3
|
1.0
|
CHD
|
2:BCL101
|
3.5
|
51.5
|
1.0
|
CD1
|
C:ILE42
|
3.9
|
48.9
|
1.0
|
C3D
|
2:BCL101
|
4.2
|
51.5
|
1.0
|
C2A
|
2:BCL101
|
4.3
|
51.5
|
1.0
|
C3A
|
2:BCL101
|
4.3
|
51.5
|
1.0
|
C3C
|
2:BCL101
|
4.3
|
51.5
|
1.0
|
ND1
|
2:HIS44
|
4.3
|
50.3
|
1.0
|
C2C
|
2:BCL101
|
4.3
|
51.5
|
1.0
|
C2B
|
2:BCL101
|
4.4
|
51.5
|
1.0
|
C2D
|
2:BCL101
|
4.4
|
51.5
|
1.0
|
C3B
|
2:BCL101
|
4.4
|
51.5
|
1.0
|
CG
|
2:HIS44
|
4.5
|
50.3
|
1.0
|
CBD
|
2:BCL101
|
4.9
|
51.5
|
1.0
|
CAA
|
2:BCL101
|
4.9
|
51.5
|
1.0
|
|
Magnesium binding site 5 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 5 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
2:Mg102
b:67.9
occ:1.00
|
MG
|
2:BCL102
|
0.0
|
67.9
|
1.0
|
NA
|
2:BCL102
|
2.0
|
67.9
|
1.0
|
NC
|
2:BCL102
|
2.0
|
67.9
|
1.0
|
ND
|
2:BCL102
|
2.0
|
67.9
|
1.0
|
NB
|
2:BCL102
|
2.0
|
67.9
|
1.0
|
NE2
|
2:HIS26
|
2.5
|
65.2
|
1.0
|
C4D
|
2:BCL102
|
2.9
|
67.9
|
1.0
|
C1A
|
2:BCL102
|
3.0
|
67.9
|
1.0
|
C4A
|
2:BCL102
|
3.0
|
67.9
|
1.0
|
C4C
|
2:BCL102
|
3.0
|
67.9
|
1.0
|
C1C
|
2:BCL102
|
3.0
|
67.9
|
1.0
|
C1B
|
2:BCL102
|
3.0
|
67.9
|
1.0
|
C4B
|
2:BCL102
|
3.0
|
67.9
|
1.0
|
C1D
|
2:BCL102
|
3.2
|
67.9
|
1.0
|
CHB
|
2:BCL102
|
3.3
|
67.9
|
1.0
|
CHA
|
2:BCL102
|
3.4
|
67.9
|
1.0
|
CE1
|
2:HIS26
|
3.4
|
65.2
|
1.0
|
CHC
|
2:BCL102
|
3.4
|
67.9
|
1.0
|
CD2
|
2:HIS26
|
3.5
|
65.2
|
1.0
|
CHD
|
2:BCL102
|
3.5
|
67.9
|
1.0
|
C3D
|
2:BCL102
|
4.1
|
67.9
|
1.0
|
C2A
|
2:BCL102
|
4.3
|
67.9
|
1.0
|
C3A
|
2:BCL102
|
4.3
|
67.9
|
1.0
|
C3C
|
2:BCL102
|
4.3
|
67.9
|
1.0
|
C2C
|
2:BCL102
|
4.3
|
67.9
|
1.0
|
C3B
|
2:BCL102
|
4.3
|
67.9
|
1.0
|
C2B
|
2:BCL102
|
4.4
|
67.9
|
1.0
|
C2D
|
2:BCL102
|
4.4
|
67.9
|
1.0
|
ND1
|
2:HIS26
|
4.5
|
65.2
|
1.0
|
CG
|
2:HIS26
|
4.6
|
65.2
|
1.0
|
CBK
|
C:U4Z401
|
4.7
|
64.7
|
1.0
|
CBD
|
2:BCL102
|
4.8
|
67.9
|
1.0
|
CG1
|
2:VAL30
|
4.8
|
60.8
|
1.0
|
CAA
|
2:BCL102
|
4.9
|
67.9
|
1.0
|
|
Magnesium binding site 6 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 6 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
3:Mg101
b:47.2
occ:1.00
|
MG
|
3:BCL101
|
0.0
|
47.2
|
1.0
|
NA
|
3:BCL101
|
2.0
|
47.2
|
1.0
|
NC
|
3:BCL101
|
2.0
|
47.2
|
1.0
|
ND
|
3:BCL101
|
2.0
|
47.2
|
1.0
|
NB
|
3:BCL101
|
2.0
|
47.2
|
1.0
|
C4D
|
3:BCL101
|
2.9
|
47.2
|
1.0
|
NE2
|
3:HIS27
|
2.9
|
42.7
|
1.0
|
C4A
|
3:BCL101
|
3.0
|
47.2
|
1.0
|
C1A
|
3:BCL101
|
3.0
|
47.2
|
1.0
|
C1C
|
3:BCL101
|
3.0
|
47.2
|
1.0
|
C4C
|
3:BCL101
|
3.0
|
47.2
|
1.0
|
C1B
|
3:BCL101
|
3.0
|
47.2
|
1.0
|
C4B
|
3:BCL101
|
3.1
|
47.2
|
1.0
|
C1D
|
3:BCL101
|
3.1
|
47.2
|
1.0
|
CHB
|
3:BCL101
|
3.3
|
47.2
|
1.0
|
CHC
|
3:BCL101
|
3.4
|
47.2
|
1.0
|
CHA
|
3:BCL101
|
3.4
|
47.2
|
1.0
|
CHD
|
3:BCL101
|
3.5
|
47.2
|
1.0
|
CE1
|
3:HIS27
|
3.5
|
42.7
|
1.0
|
CBB
|
6:BCL101
|
4.0
|
45.8
|
1.0
|
CD2
|
3:HIS27
|
4.1
|
42.7
|
1.0
|
C3D
|
3:BCL101
|
4.2
|
47.2
|
1.0
|
C2A
|
3:BCL101
|
4.3
|
47.2
|
1.0
|
C3A
|
3:BCL101
|
4.3
|
47.2
|
1.0
|
C2C
|
3:BCL101
|
4.3
|
47.2
|
1.0
|
C3C
|
3:BCL101
|
4.3
|
47.2
|
1.0
|
C2B
|
3:BCL101
|
4.4
|
47.2
|
1.0
|
C2D
|
3:BCL101
|
4.4
|
47.2
|
1.0
|
C3B
|
3:BCL101
|
4.4
|
47.2
|
1.0
|
CMB
|
6:BCL101
|
4.4
|
45.8
|
1.0
|
CBO
|
4:U42104
|
4.6
|
3.9
|
1.0
|
ND1
|
3:HIS27
|
4.8
|
42.7
|
1.0
|
CBD
|
3:BCL101
|
4.9
|
47.2
|
1.0
|
CAB
|
6:BCL101
|
4.9
|
45.8
|
1.0
|
C2B
|
6:BCL101
|
4.9
|
45.8
|
1.0
|
|
Magnesium binding site 7 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 7 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
4:Mg102
b:49.0
occ:1.00
|
MG
|
4:BCL102
|
0.0
|
49.0
|
1.0
|
NA
|
4:BCL102
|
2.0
|
49.0
|
1.0
|
NC
|
4:BCL102
|
2.0
|
49.0
|
1.0
|
ND
|
4:BCL102
|
2.0
|
49.0
|
1.0
|
NB
|
4:BCL102
|
2.0
|
49.0
|
1.0
|
NE2
|
4:HIS44
|
2.3
|
46.7
|
1.0
|
C4D
|
4:BCL102
|
3.0
|
49.0
|
1.0
|
C4A
|
4:BCL102
|
3.0
|
49.0
|
1.0
|
C4C
|
4:BCL102
|
3.0
|
49.0
|
1.0
|
C1A
|
4:BCL102
|
3.0
|
49.0
|
1.0
|
C1C
|
4:BCL102
|
3.0
|
49.0
|
1.0
|
C1B
|
4:BCL102
|
3.0
|
49.0
|
1.0
|
C4B
|
4:BCL102
|
3.1
|
49.0
|
1.0
|
CE1
|
4:HIS44
|
3.1
|
46.7
|
1.0
|
C1D
|
4:BCL102
|
3.1
|
49.0
|
1.0
|
CHB
|
4:BCL102
|
3.3
|
49.0
|
1.0
|
CHC
|
4:BCL102
|
3.4
|
49.0
|
1.0
|
CD2
|
4:HIS44
|
3.4
|
46.7
|
1.0
|
CHA
|
4:BCL102
|
3.5
|
49.0
|
1.0
|
CHD
|
4:BCL102
|
3.5
|
49.0
|
1.0
|
CBB
|
1:BCL101
|
4.1
|
52.1
|
1.0
|
C3D
|
4:BCL102
|
4.2
|
49.0
|
1.0
|
C2A
|
4:BCL102
|
4.3
|
49.0
|
1.0
|
ND1
|
4:HIS44
|
4.3
|
46.7
|
1.0
|
C3A
|
4:BCL102
|
4.3
|
49.0
|
1.0
|
C2C
|
4:BCL102
|
4.3
|
49.0
|
1.0
|
C3C
|
4:BCL102
|
4.3
|
49.0
|
1.0
|
CMB
|
1:BCL101
|
4.3
|
52.1
|
1.0
|
C2D
|
4:BCL102
|
4.4
|
49.0
|
1.0
|
C2B
|
4:BCL102
|
4.4
|
49.0
|
1.0
|
C3B
|
4:BCL102
|
4.4
|
49.0
|
1.0
|
CG
|
4:HIS44
|
4.5
|
46.7
|
1.0
|
CMD
|
3:BCL101
|
4.9
|
47.2
|
1.0
|
CBC
|
4:BCL102
|
4.9
|
49.0
|
1.0
|
CBD
|
4:BCL102
|
4.9
|
49.0
|
1.0
|
C2B
|
1:BCL101
|
4.9
|
52.1
|
1.0
|
CAA
|
4:BCL102
|
5.0
|
49.0
|
1.0
|
|
Magnesium binding site 8 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 8 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
4:Mg103
b:58.7
occ:1.00
|
MG
|
4:BCL103
|
0.0
|
58.7
|
1.0
|
NA
|
4:BCL103
|
2.0
|
58.7
|
1.0
|
NC
|
4:BCL103
|
2.0
|
58.7
|
1.0
|
ND
|
4:BCL103
|
2.0
|
58.7
|
1.0
|
NB
|
4:BCL103
|
2.0
|
58.7
|
1.0
|
NE2
|
4:HIS26
|
2.8
|
56.2
|
1.0
|
C4D
|
4:BCL103
|
2.9
|
58.7
|
1.0
|
C4A
|
4:BCL103
|
2.9
|
58.7
|
1.0
|
C1A
|
4:BCL103
|
3.0
|
58.7
|
1.0
|
C4C
|
4:BCL103
|
3.0
|
58.7
|
1.0
|
C1C
|
4:BCL103
|
3.0
|
58.7
|
1.0
|
C1B
|
4:BCL103
|
3.0
|
58.7
|
1.0
|
C4B
|
4:BCL103
|
3.1
|
58.7
|
1.0
|
C1D
|
4:BCL103
|
3.2
|
58.7
|
1.0
|
CHB
|
4:BCL103
|
3.3
|
58.7
|
1.0
|
CHA
|
4:BCL103
|
3.4
|
58.7
|
1.0
|
CHC
|
4:BCL103
|
3.4
|
58.7
|
1.0
|
CHD
|
4:BCL103
|
3.5
|
58.7
|
1.0
|
CD2
|
4:HIS26
|
3.6
|
56.2
|
1.0
|
CE1
|
4:HIS26
|
3.9
|
56.2
|
1.0
|
C3D
|
4:BCL103
|
4.1
|
58.7
|
1.0
|
C3A
|
4:BCL103
|
4.3
|
58.7
|
1.0
|
C3C
|
4:BCL103
|
4.3
|
58.7
|
1.0
|
C2A
|
4:BCL103
|
4.3
|
58.7
|
1.0
|
C2C
|
4:BCL103
|
4.3
|
58.7
|
1.0
|
C2B
|
4:BCL103
|
4.4
|
58.7
|
1.0
|
C3B
|
4:BCL103
|
4.4
|
58.7
|
1.0
|
C2D
|
4:BCL103
|
4.4
|
58.7
|
1.0
|
CAE
|
4:U42101
|
4.6
|
14.4
|
1.0
|
CAC
|
4:U42101
|
4.8
|
14.4
|
1.0
|
CAG
|
1:U4Z102
|
4.8
|
58.4
|
1.0
|
CG
|
4:HIS26
|
4.8
|
56.2
|
1.0
|
CBD
|
4:BCL103
|
4.8
|
58.7
|
1.0
|
ND1
|
4:HIS26
|
4.9
|
56.2
|
1.0
|
CAC
|
4:BCL103
|
5.0
|
58.7
|
1.0
|
|
Magnesium binding site 9 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 9 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
5:Mg101
b:44.8
occ:1.00
|
MG
|
5:BCL101
|
0.0
|
44.8
|
1.0
|
NA
|
5:BCL101
|
2.0
|
44.8
|
1.0
|
NC
|
5:BCL101
|
2.0
|
44.8
|
1.0
|
ND
|
5:BCL101
|
2.0
|
44.8
|
1.0
|
NB
|
5:BCL101
|
2.0
|
44.8
|
1.0
|
C4D
|
5:BCL101
|
2.9
|
44.8
|
1.0
|
C4A
|
5:BCL101
|
3.0
|
44.8
|
1.0
|
C1A
|
5:BCL101
|
3.0
|
44.8
|
1.0
|
C4C
|
5:BCL101
|
3.0
|
44.8
|
1.0
|
C1C
|
5:BCL101
|
3.0
|
44.8
|
1.0
|
C1B
|
5:BCL101
|
3.0
|
44.8
|
1.0
|
C4B
|
5:BCL101
|
3.1
|
44.8
|
1.0
|
NE2
|
5:HIS27
|
3.1
|
38.0
|
1.0
|
C1D
|
5:BCL101
|
3.1
|
44.8
|
1.0
|
CHB
|
5:BCL101
|
3.3
|
44.8
|
1.0
|
CHC
|
5:BCL101
|
3.4
|
44.8
|
1.0
|
CHA
|
5:BCL101
|
3.4
|
44.8
|
1.0
|
CHD
|
5:BCL101
|
3.5
|
44.8
|
1.0
|
CE1
|
5:HIS27
|
3.8
|
38.0
|
1.0
|
CBB
|
8:BCL102
|
4.1
|
44.6
|
1.0
|
C3D
|
5:BCL101
|
4.2
|
44.8
|
1.0
|
CD2
|
5:HIS27
|
4.2
|
38.0
|
1.0
|
C3A
|
5:BCL101
|
4.3
|
44.8
|
1.0
|
C2A
|
5:BCL101
|
4.3
|
44.8
|
1.0
|
CMB
|
8:BCL102
|
4.3
|
44.6
|
1.0
|
C2C
|
5:BCL101
|
4.3
|
44.8
|
1.0
|
C3C
|
5:BCL101
|
4.3
|
44.8
|
1.0
|
C2B
|
5:BCL101
|
4.4
|
44.8
|
1.0
|
C3B
|
5:BCL101
|
4.4
|
44.8
|
1.0
|
C2D
|
5:BCL101
|
4.4
|
44.8
|
1.0
|
CBO
|
8:U42101
|
4.7
|
13.3
|
1.0
|
CBK
|
8:U42101
|
4.9
|
13.3
|
1.0
|
CBD
|
5:BCL101
|
4.9
|
44.8
|
1.0
|
C2B
|
8:BCL102
|
4.9
|
44.6
|
1.0
|
CAB
|
8:BCL102
|
5.0
|
44.6
|
1.0
|
|
Magnesium binding site 10 out
of 48 in 8iug
Go back to
Magnesium Binding Sites List in 8iug
Magnesium binding site 10 out
of 48 in the Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
6:Mg101
b:45.8
occ:1.00
|
MG
|
6:BCL101
|
0.0
|
45.8
|
1.0
|
NA
|
6:BCL101
|
2.0
|
45.8
|
1.0
|
NC
|
6:BCL101
|
2.0
|
45.8
|
1.0
|
ND
|
6:BCL101
|
2.0
|
45.8
|
1.0
|
NB
|
6:BCL101
|
2.0
|
45.8
|
1.0
|
NE2
|
6:HIS44
|
2.2
|
42.1
|
1.0
|
C4D
|
6:BCL101
|
3.0
|
45.8
|
1.0
|
C4A
|
6:BCL101
|
3.0
|
45.8
|
1.0
|
C1A
|
6:BCL101
|
3.0
|
45.8
|
1.0
|
C4C
|
6:BCL101
|
3.0
|
45.8
|
1.0
|
C1C
|
6:BCL101
|
3.0
|
45.8
|
1.0
|
C1B
|
6:BCL101
|
3.0
|
45.8
|
1.0
|
CE1
|
6:HIS44
|
3.1
|
42.1
|
1.0
|
C4B
|
6:BCL101
|
3.1
|
45.8
|
1.0
|
C1D
|
6:BCL101
|
3.1
|
45.8
|
1.0
|
CD2
|
6:HIS44
|
3.3
|
42.1
|
1.0
|
CHB
|
6:BCL101
|
3.3
|
45.8
|
1.0
|
CHC
|
6:BCL101
|
3.4
|
45.8
|
1.0
|
CHA
|
6:BCL101
|
3.4
|
45.8
|
1.0
|
CHD
|
6:BCL101
|
3.5
|
45.8
|
1.0
|
C3D
|
6:BCL101
|
4.2
|
45.8
|
1.0
|
ND1
|
6:HIS44
|
4.2
|
42.1
|
1.0
|
C2A
|
6:BCL101
|
4.3
|
45.8
|
1.0
|
CBB
|
3:BCL101
|
4.3
|
47.2
|
1.0
|
C3A
|
6:BCL101
|
4.3
|
45.8
|
1.0
|
C2C
|
6:BCL101
|
4.3
|
45.8
|
1.0
|
C3C
|
6:BCL101
|
4.3
|
45.8
|
1.0
|
CMB
|
3:BCL101
|
4.3
|
47.2
|
1.0
|
C2D
|
6:BCL101
|
4.4
|
45.8
|
1.0
|
C2B
|
6:BCL101
|
4.4
|
45.8
|
1.0
|
CG
|
6:HIS44
|
4.4
|
42.1
|
1.0
|
C3B
|
6:BCL101
|
4.4
|
45.8
|
1.0
|
CAA
|
6:BCL101
|
4.9
|
45.8
|
1.0
|
CMD
|
5:BCL101
|
4.9
|
44.8
|
1.0
|
CBC
|
6:BCL101
|
4.9
|
45.8
|
1.0
|
CBD
|
6:BCL101
|
4.9
|
45.8
|
1.0
|
C2B
|
3:BCL101
|
4.9
|
47.2
|
1.0
|
|
Reference:
C.H.Qi,
G.L.Wang,
F.F.Wang,
Y.Xin,
M.J.Zou,
M.T.Madigan,
Z.Y.Wang-Otomo,
F.Ma,
L.J.Yu.
New Insights on the Photocomplex of Roseiflexus Castenholzii Revealed From Comparisons of Native and Carotenoid-Depleted Complexes. J.Biol.Chem. V. 299 05057 2023.
ISSN: ESSN 1083-351X
PubMed: 37468106
DOI: 10.1016/J.JBC.2023.105057
Page generated: Fri Oct 4 11:00:52 2024
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