Magnesium in PDB 8iun: Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Other elements in 8iun:
The structure of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii also contains other interesting chemical elements:
Magnesium Binding Sites:
Magnesium binding site 1 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 1 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
W:Mg101
b:44.9
occ:1.00
|
MG
|
W:BCL101
|
0.0
|
44.9
|
1.0
|
NA
|
W:BCL101
|
2.0
|
44.9
|
1.0
|
NC
|
W:BCL101
|
2.0
|
44.9
|
1.0
|
ND
|
W:BCL101
|
2.0
|
44.9
|
1.0
|
NB
|
W:BCL101
|
2.0
|
44.9
|
1.0
|
NE2
|
W:HIS44
|
2.6
|
43.8
|
1.0
|
C4D
|
W:BCL101
|
3.0
|
44.9
|
1.0
|
C4A
|
W:BCL101
|
3.0
|
44.9
|
1.0
|
C4C
|
W:BCL101
|
3.0
|
44.9
|
1.0
|
C1A
|
W:BCL101
|
3.0
|
44.9
|
1.0
|
C1C
|
W:BCL101
|
3.0
|
44.9
|
1.0
|
C1B
|
W:BCL101
|
3.0
|
44.9
|
1.0
|
C4B
|
W:BCL101
|
3.1
|
44.9
|
1.0
|
C1D
|
W:BCL101
|
3.1
|
44.9
|
1.0
|
CHB
|
W:BCL101
|
3.3
|
44.9
|
1.0
|
CHC
|
W:BCL101
|
3.4
|
44.9
|
1.0
|
CHA
|
W:BCL101
|
3.4
|
44.9
|
1.0
|
CD2
|
W:HIS44
|
3.4
|
43.8
|
1.0
|
CHD
|
W:BCL101
|
3.5
|
44.9
|
1.0
|
CE1
|
W:HIS44
|
3.6
|
43.8
|
1.0
|
CMB
|
T:BCL101
|
4.1
|
35.5
|
1.0
|
C3D
|
W:BCL101
|
4.2
|
44.9
|
1.0
|
C2A
|
W:BCL101
|
4.3
|
44.9
|
1.0
|
C3A
|
W:BCL101
|
4.3
|
44.9
|
1.0
|
C3C
|
W:BCL101
|
4.3
|
44.9
|
1.0
|
C2C
|
W:BCL101
|
4.3
|
44.9
|
1.0
|
C2D
|
W:BCL101
|
4.4
|
44.9
|
1.0
|
C2B
|
W:BCL101
|
4.4
|
44.9
|
1.0
|
C3B
|
W:BCL101
|
4.4
|
44.9
|
1.0
|
CBB
|
T:BCL101
|
4.5
|
35.5
|
1.0
|
CG
|
W:HIS44
|
4.7
|
43.8
|
1.0
|
ND1
|
W:HIS44
|
4.7
|
43.8
|
1.0
|
C2B
|
T:BCL101
|
4.8
|
35.5
|
1.0
|
C31
|
U:PGV104
|
4.8
|
51.3
|
1.0
|
CBD
|
W:BCL101
|
4.9
|
44.9
|
1.0
|
CAA
|
W:BCL101
|
4.9
|
44.9
|
1.0
|
CAC
|
W:BCL101
|
5.0
|
44.9
|
1.0
|
CMA
|
W:BCL101
|
5.0
|
44.9
|
1.0
|
|
Magnesium binding site 2 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 2 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
W:Mg102
b:44.1
occ:1.00
|
MG
|
W:BCL102
|
0.0
|
44.1
|
1.0
|
NC
|
W:BCL102
|
2.0
|
44.1
|
1.0
|
NA
|
W:BCL102
|
2.0
|
44.1
|
1.0
|
ND
|
W:BCL102
|
2.0
|
44.1
|
1.0
|
NB
|
W:BCL102
|
2.0
|
44.1
|
1.0
|
NE2
|
W:HIS26
|
2.4
|
46.6
|
1.0
|
C4D
|
W:BCL102
|
2.9
|
44.1
|
1.0
|
C4A
|
W:BCL102
|
3.0
|
44.1
|
1.0
|
C1C
|
W:BCL102
|
3.0
|
44.1
|
1.0
|
C1A
|
W:BCL102
|
3.0
|
44.1
|
1.0
|
C4C
|
W:BCL102
|
3.0
|
44.1
|
1.0
|
C1B
|
W:BCL102
|
3.0
|
44.1
|
1.0
|
C4B
|
W:BCL102
|
3.1
|
44.1
|
1.0
|
C1D
|
W:BCL102
|
3.2
|
44.1
|
1.0
|
CE1
|
W:HIS26
|
3.3
|
46.6
|
1.0
|
CHC
|
W:BCL102
|
3.3
|
44.1
|
1.0
|
CHB
|
W:BCL102
|
3.4
|
44.1
|
1.0
|
CHA
|
W:BCL102
|
3.4
|
44.1
|
1.0
|
CD2
|
W:HIS26
|
3.5
|
46.6
|
1.0
|
CHD
|
W:BCL102
|
3.5
|
44.1
|
1.0
|
C3D
|
W:BCL102
|
4.2
|
44.1
|
1.0
|
C3A
|
W:BCL102
|
4.3
|
44.1
|
1.0
|
C3C
|
W:BCL102
|
4.3
|
44.1
|
1.0
|
C2A
|
W:BCL102
|
4.3
|
44.1
|
1.0
|
C2C
|
W:BCL102
|
4.3
|
44.1
|
1.0
|
C3B
|
W:BCL102
|
4.4
|
44.1
|
1.0
|
C2B
|
W:BCL102
|
4.4
|
44.1
|
1.0
|
C2D
|
W:BCL102
|
4.4
|
44.1
|
1.0
|
ND1
|
W:HIS26
|
4.4
|
46.6
|
1.0
|
CG
|
W:HIS26
|
4.5
|
46.6
|
1.0
|
CAF
|
R:U4Z101
|
4.8
|
36.2
|
1.0
|
CBD
|
W:BCL102
|
4.9
|
44.1
|
1.0
|
CMA
|
W:BCL102
|
5.0
|
44.1
|
1.0
|
|
Magnesium binding site 3 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 3 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
U:Mg101
b:33.2
occ:1.00
|
MG
|
U:BCL101
|
0.0
|
33.2
|
1.0
|
NA
|
U:BCL101
|
2.0
|
33.2
|
1.0
|
NC
|
U:BCL101
|
2.0
|
33.2
|
1.0
|
ND
|
U:BCL101
|
2.0
|
33.2
|
1.0
|
NB
|
U:BCL101
|
2.0
|
33.2
|
1.0
|
NE2
|
U:HIS44
|
2.5
|
29.8
|
1.0
|
C4D
|
U:BCL101
|
3.0
|
33.2
|
1.0
|
C4A
|
U:BCL101
|
3.0
|
33.2
|
1.0
|
C4C
|
U:BCL101
|
3.0
|
33.2
|
1.0
|
C1A
|
U:BCL101
|
3.0
|
33.2
|
1.0
|
C1C
|
U:BCL101
|
3.0
|
33.2
|
1.0
|
C1B
|
U:BCL101
|
3.0
|
33.2
|
1.0
|
C4B
|
U:BCL101
|
3.1
|
33.2
|
1.0
|
C1D
|
U:BCL101
|
3.1
|
33.2
|
1.0
|
CHB
|
U:BCL101
|
3.3
|
33.2
|
1.0
|
CHC
|
U:BCL101
|
3.4
|
33.2
|
1.0
|
CD2
|
U:HIS44
|
3.4
|
29.8
|
1.0
|
CHA
|
U:BCL101
|
3.4
|
33.2
|
1.0
|
CHD
|
U:BCL101
|
3.5
|
33.2
|
1.0
|
CE1
|
U:HIS44
|
3.5
|
29.8
|
1.0
|
C3D
|
U:BCL101
|
4.2
|
33.2
|
1.0
|
C2A
|
U:BCL101
|
4.3
|
33.2
|
1.0
|
C3A
|
U:BCL101
|
4.3
|
33.2
|
1.0
|
CMB
|
R:BCL102
|
4.3
|
29.3
|
1.0
|
C2C
|
U:BCL101
|
4.3
|
33.2
|
1.0
|
C3C
|
U:BCL101
|
4.3
|
33.2
|
1.0
|
C2D
|
U:BCL101
|
4.4
|
33.2
|
1.0
|
C2B
|
U:BCL101
|
4.4
|
33.2
|
1.0
|
C3B
|
U:BCL101
|
4.4
|
33.2
|
1.0
|
CBB
|
R:BCL102
|
4.4
|
29.3
|
1.0
|
CG
|
U:HIS44
|
4.6
|
29.8
|
1.0
|
ND1
|
U:HIS44
|
4.6
|
29.8
|
1.0
|
C31
|
U:PGV103
|
4.8
|
43.5
|
1.0
|
CBC
|
U:BCL101
|
4.9
|
33.2
|
1.0
|
CBD
|
U:BCL101
|
4.9
|
33.2
|
1.0
|
C2B
|
R:BCL102
|
5.0
|
29.3
|
1.0
|
CMD
|
T:BCL101
|
5.0
|
35.5
|
1.0
|
|
Magnesium binding site 4 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 4 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
U:Mg102
b:39.4
occ:1.00
|
MG
|
U:BCL102
|
0.0
|
39.4
|
1.0
|
NA
|
U:BCL102
|
2.0
|
39.4
|
1.0
|
NC
|
U:BCL102
|
2.0
|
39.4
|
1.0
|
ND
|
U:BCL102
|
2.0
|
39.4
|
1.0
|
NB
|
U:BCL102
|
2.1
|
39.4
|
1.0
|
NE2
|
U:HIS26
|
2.4
|
37.7
|
1.0
|
C4A
|
U:BCL102
|
2.9
|
39.4
|
1.0
|
C4D
|
U:BCL102
|
2.9
|
39.4
|
1.0
|
C4C
|
U:BCL102
|
3.0
|
39.4
|
1.0
|
C1A
|
U:BCL102
|
3.0
|
39.4
|
1.0
|
C1C
|
U:BCL102
|
3.0
|
39.4
|
1.0
|
C1B
|
U:BCL102
|
3.0
|
39.4
|
1.0
|
C4B
|
U:BCL102
|
3.1
|
39.4
|
1.0
|
C1D
|
U:BCL102
|
3.2
|
39.4
|
1.0
|
CHB
|
U:BCL102
|
3.3
|
39.4
|
1.0
|
CD2
|
U:HIS26
|
3.3
|
37.7
|
1.0
|
CE1
|
U:HIS26
|
3.3
|
37.7
|
1.0
|
CHC
|
U:BCL102
|
3.4
|
39.4
|
1.0
|
CHA
|
U:BCL102
|
3.4
|
39.4
|
1.0
|
CHD
|
U:BCL102
|
3.5
|
39.4
|
1.0
|
C3D
|
U:BCL102
|
4.2
|
39.4
|
1.0
|
C3A
|
U:BCL102
|
4.2
|
39.4
|
1.0
|
C2A
|
U:BCL102
|
4.3
|
39.4
|
1.0
|
C3C
|
U:BCL102
|
4.3
|
39.4
|
1.0
|
C2C
|
U:BCL102
|
4.3
|
39.4
|
1.0
|
C3B
|
U:BCL102
|
4.4
|
39.4
|
1.0
|
C2B
|
U:BCL102
|
4.4
|
39.4
|
1.0
|
C2D
|
U:BCL102
|
4.4
|
39.4
|
1.0
|
ND1
|
U:HIS26
|
4.4
|
37.7
|
1.0
|
CG
|
U:HIS26
|
4.5
|
37.7
|
1.0
|
CMA
|
U:BCL102
|
4.9
|
39.4
|
1.0
|
CBD
|
U:BCL102
|
4.9
|
39.4
|
1.0
|
CG1
|
U:VAL30
|
4.9
|
39.0
|
1.0
|
|
Magnesium binding site 5 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 5 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg101
b:28.9
occ:1.00
|
MG
|
S:BCL101
|
0.0
|
28.9
|
1.0
|
NA
|
S:BCL101
|
2.0
|
28.9
|
1.0
|
NC
|
S:BCL101
|
2.0
|
28.9
|
1.0
|
ND
|
S:BCL101
|
2.0
|
28.9
|
1.0
|
NB
|
S:BCL101
|
2.0
|
28.9
|
1.0
|
NE2
|
S:HIS44
|
2.5
|
25.4
|
1.0
|
C4D
|
S:BCL101
|
3.0
|
28.9
|
1.0
|
C1A
|
S:BCL101
|
3.0
|
28.9
|
1.0
|
C4A
|
S:BCL101
|
3.0
|
28.9
|
1.0
|
C4C
|
S:BCL101
|
3.0
|
28.9
|
1.0
|
C1C
|
S:BCL101
|
3.0
|
28.9
|
1.0
|
C1B
|
S:BCL101
|
3.0
|
28.9
|
1.0
|
C4B
|
S:BCL101
|
3.1
|
28.9
|
1.0
|
C1D
|
S:BCL101
|
3.1
|
28.9
|
1.0
|
CHB
|
S:BCL101
|
3.4
|
28.9
|
1.0
|
CHC
|
S:BCL101
|
3.4
|
28.9
|
1.0
|
CE1
|
S:HIS44
|
3.4
|
25.4
|
1.0
|
CD2
|
S:HIS44
|
3.4
|
25.4
|
1.0
|
CHA
|
S:BCL101
|
3.4
|
28.9
|
1.0
|
CHD
|
S:BCL101
|
3.5
|
28.9
|
1.0
|
C3D
|
S:BCL101
|
4.2
|
28.9
|
1.0
|
CMB
|
P:BCL101
|
4.3
|
29.9
|
1.0
|
C2A
|
S:BCL101
|
4.3
|
28.9
|
1.0
|
C3A
|
S:BCL101
|
4.3
|
28.9
|
1.0
|
C2C
|
S:BCL101
|
4.3
|
28.9
|
1.0
|
CBB
|
P:BCL101
|
4.3
|
29.9
|
1.0
|
C3C
|
S:BCL101
|
4.3
|
28.9
|
1.0
|
C2D
|
S:BCL101
|
4.4
|
28.9
|
1.0
|
C2B
|
S:BCL101
|
4.4
|
28.9
|
1.0
|
C3B
|
S:BCL101
|
4.4
|
28.9
|
1.0
|
ND1
|
S:HIS44
|
4.6
|
25.4
|
1.0
|
CG
|
S:HIS44
|
4.6
|
25.4
|
1.0
|
CMD
|
R:BCL102
|
4.9
|
29.3
|
1.0
|
CBD
|
S:BCL101
|
4.9
|
28.9
|
1.0
|
CAA
|
S:BCL101
|
4.9
|
28.9
|
1.0
|
C2B
|
P:BCL101
|
5.0
|
29.9
|
1.0
|
|
Magnesium binding site 6 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 6 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg102
b:37.8
occ:1.00
|
MG
|
S:BCL102
|
0.0
|
37.8
|
1.0
|
NA
|
S:BCL102
|
2.0
|
37.8
|
1.0
|
NC
|
S:BCL102
|
2.0
|
37.8
|
1.0
|
ND
|
S:BCL102
|
2.0
|
37.8
|
1.0
|
NB
|
S:BCL102
|
2.0
|
37.8
|
1.0
|
NE2
|
S:HIS26
|
2.5
|
33.7
|
1.0
|
C4D
|
S:BCL102
|
2.9
|
37.8
|
1.0
|
C1A
|
S:BCL102
|
3.0
|
37.8
|
1.0
|
C4A
|
S:BCL102
|
3.0
|
37.8
|
1.0
|
C4C
|
S:BCL102
|
3.0
|
37.8
|
1.0
|
C1C
|
S:BCL102
|
3.0
|
37.8
|
1.0
|
C1B
|
S:BCL102
|
3.0
|
37.8
|
1.0
|
C4B
|
S:BCL102
|
3.1
|
37.8
|
1.0
|
C1D
|
S:BCL102
|
3.2
|
37.8
|
1.0
|
CHB
|
S:BCL102
|
3.3
|
37.8
|
1.0
|
CHA
|
S:BCL102
|
3.4
|
37.8
|
1.0
|
CHC
|
S:BCL102
|
3.4
|
37.8
|
1.0
|
CD2
|
S:HIS26
|
3.4
|
33.7
|
1.0
|
CHD
|
S:BCL102
|
3.5
|
37.8
|
1.0
|
CE1
|
S:HIS26
|
3.5
|
33.7
|
1.0
|
C3D
|
S:BCL102
|
4.2
|
37.8
|
1.0
|
C2A
|
S:BCL102
|
4.3
|
37.8
|
1.0
|
C3A
|
S:BCL102
|
4.3
|
37.8
|
1.0
|
C3C
|
S:BCL102
|
4.3
|
37.8
|
1.0
|
C2C
|
S:BCL102
|
4.3
|
37.8
|
1.0
|
C3B
|
S:BCL102
|
4.4
|
37.8
|
1.0
|
C2B
|
S:BCL102
|
4.4
|
37.8
|
1.0
|
C2D
|
S:BCL102
|
4.4
|
37.8
|
1.0
|
CG
|
S:HIS26
|
4.6
|
33.7
|
1.0
|
ND1
|
S:HIS26
|
4.6
|
33.7
|
1.0
|
CBD
|
S:BCL102
|
4.9
|
37.8
|
1.0
|
|
Magnesium binding site 7 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 7 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
Q:Mg101
b:30.3
occ:1.00
|
MG
|
Q:BCL101
|
0.0
|
30.3
|
1.0
|
NA
|
Q:BCL101
|
2.0
|
30.3
|
1.0
|
NC
|
Q:BCL101
|
2.0
|
30.3
|
1.0
|
ND
|
Q:BCL101
|
2.0
|
30.3
|
1.0
|
NB
|
Q:BCL101
|
2.0
|
30.3
|
1.0
|
NE2
|
Q:HIS44
|
2.4
|
27.1
|
1.0
|
C4D
|
Q:BCL101
|
3.0
|
30.3
|
1.0
|
C4A
|
Q:BCL101
|
3.0
|
30.3
|
1.0
|
C1A
|
Q:BCL101
|
3.0
|
30.3
|
1.0
|
C4C
|
Q:BCL101
|
3.0
|
30.3
|
1.0
|
C1C
|
Q:BCL101
|
3.0
|
30.3
|
1.0
|
C1B
|
Q:BCL101
|
3.0
|
30.3
|
1.0
|
C4B
|
Q:BCL101
|
3.1
|
30.3
|
1.0
|
C1D
|
Q:BCL101
|
3.1
|
30.3
|
1.0
|
CE1
|
Q:HIS44
|
3.3
|
27.1
|
1.0
|
CHB
|
Q:BCL101
|
3.3
|
30.3
|
1.0
|
CHC
|
Q:BCL101
|
3.4
|
30.3
|
1.0
|
CD2
|
Q:HIS44
|
3.4
|
27.1
|
1.0
|
CHA
|
Q:BCL101
|
3.4
|
30.3
|
1.0
|
CHD
|
Q:BCL101
|
3.5
|
30.3
|
1.0
|
C3D
|
Q:BCL101
|
4.2
|
30.3
|
1.0
|
CMB
|
N:BCL101
|
4.3
|
31.1
|
1.0
|
C2A
|
Q:BCL101
|
4.3
|
30.3
|
1.0
|
C3A
|
Q:BCL101
|
4.3
|
30.3
|
1.0
|
C2C
|
Q:BCL101
|
4.3
|
30.3
|
1.0
|
C3C
|
Q:BCL101
|
4.3
|
30.3
|
1.0
|
CBB
|
N:BCL101
|
4.3
|
31.1
|
1.0
|
C3B
|
Q:BCL101
|
4.4
|
30.3
|
1.0
|
C2D
|
Q:BCL101
|
4.4
|
30.3
|
1.0
|
C2B
|
Q:BCL101
|
4.4
|
30.3
|
1.0
|
ND1
|
Q:HIS44
|
4.5
|
27.1
|
1.0
|
CG
|
Q:HIS44
|
4.6
|
27.1
|
1.0
|
CMD
|
P:BCL101
|
4.8
|
29.9
|
1.0
|
CBD
|
Q:BCL101
|
4.9
|
30.3
|
1.0
|
C2B
|
N:BCL101
|
4.9
|
31.1
|
1.0
|
CBC
|
Q:BCL101
|
5.0
|
30.3
|
1.0
|
CAA
|
Q:BCL101
|
5.0
|
30.3
|
1.0
|
|
Magnesium binding site 8 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 8 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
Q:Mg102
b:40.2
occ:1.00
|
MG
|
Q:BCL102
|
0.0
|
40.2
|
1.0
|
NA
|
Q:BCL102
|
2.0
|
40.2
|
1.0
|
NC
|
Q:BCL102
|
2.0
|
40.2
|
1.0
|
ND
|
Q:BCL102
|
2.0
|
40.2
|
1.0
|
NB
|
Q:BCL102
|
2.0
|
40.2
|
1.0
|
CE1
|
Q:HIS26
|
2.9
|
37.1
|
1.0
|
C4D
|
Q:BCL102
|
2.9
|
40.2
|
1.0
|
C4A
|
Q:BCL102
|
3.0
|
40.2
|
1.0
|
C1A
|
Q:BCL102
|
3.0
|
40.2
|
1.0
|
C4C
|
Q:BCL102
|
3.0
|
40.2
|
1.0
|
C1C
|
Q:BCL102
|
3.0
|
40.2
|
1.0
|
C1B
|
Q:BCL102
|
3.0
|
40.2
|
1.0
|
C4B
|
Q:BCL102
|
3.1
|
40.2
|
1.0
|
C1D
|
Q:BCL102
|
3.2
|
40.2
|
1.0
|
CHB
|
Q:BCL102
|
3.3
|
40.2
|
1.0
|
CHC
|
Q:BCL102
|
3.4
|
40.2
|
1.0
|
CHA
|
Q:BCL102
|
3.4
|
40.2
|
1.0
|
NE2
|
Q:HIS26
|
3.4
|
37.1
|
1.0
|
CHD
|
Q:BCL102
|
3.5
|
40.2
|
1.0
|
ND1
|
Q:HIS26
|
4.0
|
37.1
|
1.0
|
C3D
|
Q:BCL102
|
4.1
|
40.2
|
1.0
|
C3A
|
Q:BCL102
|
4.3
|
40.2
|
1.0
|
C2A
|
Q:BCL102
|
4.3
|
40.2
|
1.0
|
C3C
|
Q:BCL102
|
4.3
|
40.2
|
1.0
|
C2C
|
Q:BCL102
|
4.3
|
40.2
|
1.0
|
C2B
|
Q:BCL102
|
4.4
|
40.2
|
1.0
|
C3B
|
Q:BCL102
|
4.4
|
40.2
|
1.0
|
C2D
|
Q:BCL102
|
4.4
|
40.2
|
1.0
|
CAF
|
J:U4Z101
|
4.6
|
37.5
|
1.0
|
CD2
|
Q:HIS26
|
4.7
|
37.1
|
1.0
|
CBD
|
Q:BCL102
|
4.8
|
40.2
|
1.0
|
CMA
|
Q:BCL102
|
4.9
|
40.2
|
1.0
|
|
Magnesium binding site 9 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 9 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Mg101
b:31.4
occ:1.00
|
MG
|
O:BCL101
|
0.0
|
31.4
|
1.0
|
NC
|
O:BCL101
|
2.0
|
31.4
|
1.0
|
NA
|
O:BCL101
|
2.0
|
31.4
|
1.0
|
ND
|
O:BCL101
|
2.0
|
31.4
|
1.0
|
NB
|
O:BCL101
|
2.0
|
31.4
|
1.0
|
NE2
|
O:HIS44
|
2.5
|
28.6
|
1.0
|
C4D
|
O:BCL101
|
3.0
|
31.4
|
1.0
|
C1A
|
O:BCL101
|
3.0
|
31.4
|
1.0
|
C4A
|
O:BCL101
|
3.0
|
31.4
|
1.0
|
C4C
|
O:BCL101
|
3.0
|
31.4
|
1.0
|
C1C
|
O:BCL101
|
3.0
|
31.4
|
1.0
|
C1B
|
O:BCL101
|
3.0
|
31.4
|
1.0
|
C4B
|
O:BCL101
|
3.1
|
31.4
|
1.0
|
C1D
|
O:BCL101
|
3.1
|
31.4
|
1.0
|
CHB
|
O:BCL101
|
3.4
|
31.4
|
1.0
|
CHC
|
O:BCL101
|
3.4
|
31.4
|
1.0
|
CD2
|
O:HIS44
|
3.4
|
28.6
|
1.0
|
CHA
|
O:BCL101
|
3.4
|
31.4
|
1.0
|
CE1
|
O:HIS44
|
3.5
|
28.6
|
1.0
|
CHD
|
O:BCL101
|
3.5
|
31.4
|
1.0
|
CBB
|
J:BCL102
|
4.2
|
31.5
|
1.0
|
C3D
|
O:BCL101
|
4.2
|
31.4
|
1.0
|
C2A
|
O:BCL101
|
4.3
|
31.4
|
1.0
|
C3A
|
O:BCL101
|
4.3
|
31.4
|
1.0
|
C2C
|
O:BCL101
|
4.3
|
31.4
|
1.0
|
C3C
|
O:BCL101
|
4.3
|
31.4
|
1.0
|
C2D
|
O:BCL101
|
4.4
|
31.4
|
1.0
|
C3B
|
O:BCL101
|
4.4
|
31.4
|
1.0
|
C2B
|
O:BCL101
|
4.4
|
31.4
|
1.0
|
CMB
|
J:BCL102
|
4.5
|
31.5
|
1.0
|
ND1
|
O:HIS44
|
4.6
|
28.6
|
1.0
|
CG
|
O:HIS44
|
4.6
|
28.6
|
1.0
|
CBC
|
O:BCL101
|
4.9
|
31.4
|
1.0
|
CBD
|
O:BCL101
|
4.9
|
31.4
|
1.0
|
CAA
|
O:BCL101
|
4.9
|
31.4
|
1.0
|
CAB
|
J:BCL102
|
4.9
|
31.5
|
1.0
|
CMD
|
N:BCL101
|
5.0
|
31.1
|
1.0
|
|
Magnesium binding site 10 out
of 48 in 8iun
Go back to
Magnesium Binding Sites List in 8iun
Magnesium binding site 10 out
of 48 in the Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Cryo-Em Structure of the Crt-Less Rc-Lh Core Complex From Roseiflexus Castenholzii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Mg102
b:43.0
occ:1.00
|
MG
|
O:BCL102
|
0.0
|
43.0
|
1.0
|
NC
|
O:BCL102
|
2.0
|
43.0
|
1.0
|
NA
|
O:BCL102
|
2.0
|
43.0
|
1.0
|
ND
|
O:BCL102
|
2.0
|
43.0
|
1.0
|
NB
|
O:BCL102
|
2.0
|
43.0
|
1.0
|
NE2
|
O:HIS26
|
2.6
|
38.5
|
1.0
|
C4D
|
O:BCL102
|
2.9
|
43.0
|
1.0
|
C4A
|
O:BCL102
|
3.0
|
43.0
|
1.0
|
C4C
|
O:BCL102
|
3.0
|
43.0
|
1.0
|
C1A
|
O:BCL102
|
3.0
|
43.0
|
1.0
|
C1C
|
O:BCL102
|
3.0
|
43.0
|
1.0
|
C1B
|
O:BCL102
|
3.0
|
43.0
|
1.0
|
C4B
|
O:BCL102
|
3.1
|
43.0
|
1.0
|
C1D
|
O:BCL102
|
3.2
|
43.0
|
1.0
|
CHB
|
O:BCL102
|
3.3
|
43.0
|
1.0
|
CHC
|
O:BCL102
|
3.4
|
43.0
|
1.0
|
CD2
|
O:HIS26
|
3.4
|
38.5
|
1.0
|
CHA
|
O:BCL102
|
3.4
|
43.0
|
1.0
|
CHD
|
O:BCL102
|
3.5
|
43.0
|
1.0
|
CE1
|
O:HIS26
|
3.6
|
38.5
|
1.0
|
C3D
|
O:BCL102
|
4.2
|
43.0
|
1.0
|
C3A
|
O:BCL102
|
4.3
|
43.0
|
1.0
|
C3C
|
O:BCL102
|
4.3
|
43.0
|
1.0
|
C2A
|
O:BCL102
|
4.3
|
43.0
|
1.0
|
C2C
|
O:BCL102
|
4.3
|
43.0
|
1.0
|
C3B
|
O:BCL102
|
4.4
|
43.0
|
1.0
|
C2B
|
O:BCL102
|
4.4
|
43.0
|
1.0
|
C2D
|
O:BCL102
|
4.4
|
43.0
|
1.0
|
CG
|
O:HIS26
|
4.6
|
38.5
|
1.0
|
ND1
|
O:HIS26
|
4.7
|
38.5
|
1.0
|
CBD
|
O:BCL102
|
4.9
|
43.0
|
1.0
|
|
Reference:
C.H.Qi,
G.L.Wang,
F.F.Wang,
Y.Xin,
M.J.Zou,
M.T.Madigan,
Z.Y.Wang-Otomo,
F.Ma,
L.J.Yu.
New Insights on the Photocomplex of Roseiflexus Castenholzii Revealed From Comparisons of Native and Carotenoid-Depleted Complexes. J.Biol.Chem. V. 299 05057 2023.
ISSN: ESSN 1083-351X
PubMed: 37468106
DOI: 10.1016/J.JBC.2023.105057
Page generated: Fri Oct 4 11:01:23 2024
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