Magnesium in PDB 8j8h: Sparta Monomer Bound with Guide-Target, State 2

The binding sites of Magnesium atom in the Sparta Monomer Bound with Guide-Target, State 2 (pdb code 8j8h). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Sparta Monomer Bound with Guide-Target, State 2, PDB code: 8j8h:

Magnesium binding site 1 out of 1 in the Sparta Monomer Bound with Guide-Target, State 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Sparta Monomer Bound with Guide-Target, State 2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:143.0 occ:1.00 OP1 E:A3 1.9 156.4 1.0 ND2 A:ASN468 2.1 173.0 1.0 OD1 A:ASN468 2.2 175.5 1.0 CG A:ASN468 2.5 174.5 1.0 OP3 E:U1 3.0 192.3 1.0 P E:A3 3.2 154.7 1.0 NE2 A:GLN222 3.4 173.3 1.0 O5' E:A3 3.6 155.2 1.0 OP2 E:U1 3.7 190.7 1.0 O3' E:G2 3.9 164.3 1.0 CB A:ASN468 3.9 172.6 1.0 P E:U1 4.0 196.7 1.0 CD1 A:ILE507 4.2 179.1 1.0 CG1 A:ILE507 4.3 178.1 1.0 OP2 E:A3 4.4 159.0 1.0 C A:ILE507 4.5 179.5 1.0 C5' E:A3 4.6 155.1 1.0 CD A:GLN222 4.6 173.3 1.0 CA A:ASN468 4.7 171.8 1.0 NZ A:LYS263 4.7 146.2 1.0 O5' E:U1 4.9 191.4 1.0 O A:ILE507 5.0 181.3 1.0

L.Guo, P.Huang, Z.Li, Y.C.Shin, P.Yan, M.Lu, M.Chen, Y.Xiao. Auto-Inhibition and Activation of A Short Argonaute-Associated Tir-Apaz Defense System. Nat.Chem.Biol. 2023.
ISSN: ESSN 1552-4469
PubMed: 37932527
DOI: 10.1038/S41589-023-01478-0