Magnesium in PDB 8jon: Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
Enzymatic activity of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
All present enzymatic activity of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942:
2.7.11.1;
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Magnesium atom in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
(pdb code 8jon). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 12 binding sites of Magnesium where determined in the
Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942, PDB code: 8jon:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 1 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg602
b:21.5
occ:1.00
|
OG1
|
A:THR57
|
1.6
|
57.7
|
1.0
|
|
O2G
|
A:ATP601
|
1.7
|
78.9
|
1.0
|
|
HG1
|
A:THR57
|
1.9
|
57.1
|
1.0
|
|
CB
|
A:THR57
|
2.9
|
62.6
|
1.0
|
|
OE2
|
A:GLU82
|
2.9
|
73.6
|
1.0
|
|
PG
|
A:ATP601
|
3.0
|
83.0
|
1.0
|
|
HB
|
A:THR57
|
3.1
|
58.9
|
1.0
|
|
HH21
|
B:ARG230
|
3.3
|
52.3
|
1.0
|
|
HG23
|
A:THR57
|
3.3
|
59.1
|
1.0
|
|
O3B
|
A:ATP601
|
3.6
|
69.5
|
1.0
|
|
O3G
|
A:ATP601
|
3.6
|
80.6
|
1.0
|
|
H
|
A:THR57
|
3.6
|
59.8
|
1.0
|
|
CG2
|
A:THR57
|
3.6
|
59.7
|
1.0
|
|
HE
|
B:ARG230
|
3.6
|
51.3
|
1.0
|
|
OD1
|
A:ASP149
|
3.6
|
69.9
|
1.0
|
|
OD2
|
A:ASP149
|
3.7
|
78.3
|
1.0
|
|
NH2
|
B:ARG230
|
3.8
|
52.1
|
1.0
|
|
O2A
|
A:ATP601
|
3.8
|
55.6
|
1.0
|
|
O3A
|
A:ATP601
|
3.9
|
58.5
|
1.0
|
|
HG21
|
A:THR57
|
3.9
|
57.5
|
1.0
|
|
CA
|
A:THR57
|
4.0
|
48.0
|
1.0
|
|
N
|
A:THR57
|
4.1
|
58.4
|
1.0
|
|
CG
|
A:ASP149
|
4.1
|
74.5
|
1.0
|
|
NE
|
B:ARG230
|
4.2
|
47.1
|
1.0
|
|
O1G
|
A:ATP601
|
4.2
|
70.9
|
1.0
|
|
HA
|
A:THR57
|
4.2
|
57.3
|
1.0
|
|
CD
|
A:GLU82
|
4.2
|
73.0
|
1.0
|
|
HH22
|
B:ARG230
|
4.3
|
52.3
|
1.0
|
|
CZ
|
B:ARG230
|
4.3
|
50.9
|
1.0
|
|
HG22
|
A:THR57
|
4.4
|
57.1
|
1.0
|
|
PB
|
A:ATP601
|
4.5
|
57.5
|
1.0
|
|
PA
|
A:ATP601
|
4.5
|
53.7
|
1.0
|
|
HG3
|
A:GLU82
|
4.7
|
68.9
|
1.0
|
|
HB2
|
A:LYS56
|
4.7
|
52.6
|
1.0
|
|
HZ3
|
B:LYS228
|
4.9
|
49.6
|
1.0
|
|
Magnesium binding site 2 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 2 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg604
b:20.0
occ:1.00
|
HG1
|
A:THR299
|
2.4
|
68.1
|
1.0
|
|
OG1
|
A:THR299
|
2.4
|
65.2
|
1.0
|
|
O1B
|
A:ADP603
|
2.6
|
20.0
|
1.0
|
|
O3B
|
A:ADP603
|
3.2
|
20.0
|
1.0
|
|
OE2
|
A:GLU323
|
3.3
|
84.3
|
1.0
|
|
OE1
|
A:GLU322
|
3.4
|
87.8
|
1.0
|
|
PB
|
A:ADP603
|
3.4
|
20.0
|
1.0
|
|
HH21
|
B:ARG463
|
3.8
|
64.9
|
1.0
|
|
CB
|
A:THR299
|
3.8
|
74.6
|
1.0
|
|
HG
|
A:SER383
|
3.8
|
84.0
|
1.0
|
|
H
|
A:THR299
|
3.9
|
69.2
|
1.0
|
|
OG
|
A:SER383
|
3.9
|
93.7
|
1.0
|
|
HB
|
A:THR299
|
4.1
|
70.4
|
1.0
|
|
HE2
|
A:LYS298
|
4.1
|
65.8
|
1.0
|
|
OD1
|
A:ASP382
|
4.2
|
74.5
|
1.0
|
|
O1A
|
A:ADP603
|
4.2
|
20.0
|
1.0
|
|
HB2
|
A:LYS298
|
4.3
|
65.0
|
1.0
|
|
NH2
|
B:ARG463
|
4.3
|
69.1
|
1.0
|
|
HG23
|
A:THR299
|
4.4
|
69.5
|
1.0
|
|
CD
|
A:GLU323
|
4.4
|
84.1
|
1.0
|
|
HG3
|
A:GLU323
|
4.4
|
79.8
|
1.0
|
|
O3A
|
A:ADP603
|
4.4
|
20.0
|
1.0
|
|
N
|
A:THR299
|
4.4
|
68.4
|
1.0
|
|
CD
|
A:GLU322
|
4.5
|
82.7
|
1.0
|
|
HB2
|
A:GLU322
|
4.5
|
79.2
|
1.0
|
|
CG2
|
A:THR299
|
4.6
|
77.5
|
1.0
|
|
HE
|
B:ARG463
|
4.6
|
63.2
|
1.0
|
|
CG
|
A:ASP382
|
4.6
|
77.2
|
1.0
|
|
OD2
|
A:ASP382
|
4.6
|
75.4
|
1.0
|
|
CA
|
A:THR299
|
4.6
|
60.8
|
1.0
|
|
HG2
|
A:GLU323
|
4.6
|
80.5
|
1.0
|
|
HG1
|
A:THR417
|
4.6
|
72.8
|
1.0
|
|
HG3
|
A:GLU322
|
4.6
|
78.5
|
1.0
|
|
HH22
|
B:ARG463
|
4.6
|
65.9
|
1.0
|
|
HG21
|
A:THR299
|
4.6
|
69.4
|
1.0
|
|
O2B
|
A:ADP603
|
4.6
|
20.0
|
1.0
|
|
HA
|
A:THR299
|
4.7
|
67.1
|
1.0
|
|
CG
|
A:GLU323
|
4.7
|
79.1
|
1.0
|
|
PA
|
A:ADP603
|
4.8
|
20.0
|
1.0
|
|
CZ
|
B:ARG463
|
5.0
|
62.1
|
1.0
|
|
Magnesium binding site 3 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 3 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg602
b:21.5
occ:1.00
|
OG1
|
B:THR57
|
1.6
|
57.7
|
1.0
|
|
O2G
|
B:ATP601
|
1.7
|
78.9
|
1.0
|
|
HG1
|
B:THR57
|
1.9
|
57.1
|
1.0
|
|
CB
|
B:THR57
|
2.9
|
62.6
|
1.0
|
|
OE2
|
B:GLU82
|
2.9
|
73.6
|
1.0
|
|
PG
|
B:ATP601
|
3.0
|
83.0
|
1.0
|
|
HB
|
B:THR57
|
3.1
|
58.9
|
1.0
|
|
HG23
|
B:THR57
|
3.3
|
59.1
|
1.0
|
|
HH21
|
C:ARG230
|
3.3
|
52.3
|
1.0
|
|
O3B
|
B:ATP601
|
3.6
|
69.5
|
1.0
|
|
O3G
|
B:ATP601
|
3.6
|
80.6
|
1.0
|
|
CG2
|
B:THR57
|
3.6
|
59.7
|
1.0
|
|
H
|
B:THR57
|
3.6
|
59.8
|
1.0
|
|
OD1
|
B:ASP149
|
3.6
|
69.9
|
1.0
|
|
HE
|
C:ARG230
|
3.7
|
51.3
|
1.0
|
|
OD2
|
B:ASP149
|
3.7
|
78.3
|
1.0
|
|
O2A
|
B:ATP601
|
3.8
|
55.6
|
1.0
|
|
NH2
|
C:ARG230
|
3.8
|
52.1
|
1.0
|
|
O3A
|
B:ATP601
|
3.9
|
58.5
|
1.0
|
|
HG21
|
B:THR57
|
3.9
|
57.5
|
1.0
|
|
CA
|
B:THR57
|
4.0
|
48.0
|
1.0
|
|
N
|
B:THR57
|
4.1
|
58.4
|
1.0
|
|
CG
|
B:ASP149
|
4.1
|
74.5
|
1.0
|
|
O1G
|
B:ATP601
|
4.2
|
70.9
|
1.0
|
|
HA
|
B:THR57
|
4.2
|
57.3
|
1.0
|
|
CD
|
B:GLU82
|
4.2
|
73.0
|
1.0
|
|
NE
|
C:ARG230
|
4.2
|
47.1
|
1.0
|
|
HH22
|
C:ARG230
|
4.3
|
52.3
|
1.0
|
|
CZ
|
C:ARG230
|
4.3
|
50.9
|
1.0
|
|
HG22
|
B:THR57
|
4.4
|
57.1
|
1.0
|
|
PB
|
B:ATP601
|
4.5
|
57.5
|
1.0
|
|
PA
|
B:ATP601
|
4.5
|
53.7
|
1.0
|
|
HG3
|
B:GLU82
|
4.7
|
68.9
|
1.0
|
|
HB2
|
B:LYS56
|
4.7
|
52.6
|
1.0
|
|
HZ3
|
C:LYS228
|
4.9
|
49.6
|
1.0
|
|
Magnesium binding site 4 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 4 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg604
b:20.0
occ:1.00
|
HG1
|
B:THR299
|
2.4
|
68.1
|
1.0
|
|
OG1
|
B:THR299
|
2.4
|
65.2
|
1.0
|
|
O1B
|
B:ADP603
|
2.6
|
20.0
|
1.0
|
|
O3B
|
B:ADP603
|
3.2
|
20.0
|
1.0
|
|
OE2
|
B:GLU323
|
3.3
|
84.3
|
1.0
|
|
OE1
|
B:GLU322
|
3.4
|
87.8
|
1.0
|
|
PB
|
B:ADP603
|
3.4
|
20.0
|
1.0
|
|
CB
|
B:THR299
|
3.8
|
74.6
|
1.0
|
|
HG
|
B:SER383
|
3.8
|
84.0
|
1.0
|
|
HH21
|
C:ARG463
|
3.8
|
64.9
|
1.0
|
|
H
|
B:THR299
|
3.9
|
69.2
|
1.0
|
|
OG
|
B:SER383
|
3.9
|
93.7
|
1.0
|
|
HB
|
B:THR299
|
4.1
|
70.4
|
1.0
|
|
HE2
|
B:LYS298
|
4.1
|
65.8
|
1.0
|
|
OD1
|
B:ASP382
|
4.2
|
74.5
|
1.0
|
|
O1A
|
B:ADP603
|
4.2
|
20.0
|
1.0
|
|
HB2
|
B:LYS298
|
4.3
|
65.0
|
1.0
|
|
NH2
|
C:ARG463
|
4.4
|
69.1
|
1.0
|
|
HG23
|
B:THR299
|
4.4
|
69.5
|
1.0
|
|
CD
|
B:GLU323
|
4.4
|
84.1
|
1.0
|
|
HG3
|
B:GLU323
|
4.4
|
79.8
|
1.0
|
|
N
|
B:THR299
|
4.4
|
68.4
|
1.0
|
|
O3A
|
B:ADP603
|
4.4
|
20.0
|
1.0
|
|
CD
|
B:GLU322
|
4.5
|
82.7
|
1.0
|
|
HB2
|
B:GLU322
|
4.5
|
79.2
|
1.0
|
|
CG2
|
B:THR299
|
4.5
|
77.5
|
1.0
|
|
CG
|
B:ASP382
|
4.6
|
77.2
|
1.0
|
|
OD2
|
B:ASP382
|
4.6
|
75.4
|
1.0
|
|
HE
|
C:ARG463
|
4.6
|
63.2
|
1.0
|
|
CA
|
B:THR299
|
4.6
|
60.8
|
1.0
|
|
HG2
|
B:GLU323
|
4.6
|
80.5
|
1.0
|
|
HG1
|
B:THR417
|
4.6
|
72.8
|
1.0
|
|
HG3
|
B:GLU322
|
4.6
|
78.5
|
1.0
|
|
HG21
|
B:THR299
|
4.6
|
69.4
|
1.0
|
|
O2B
|
B:ADP603
|
4.7
|
20.0
|
1.0
|
|
HH22
|
C:ARG463
|
4.7
|
65.9
|
1.0
|
|
HA
|
B:THR299
|
4.7
|
67.1
|
1.0
|
|
CG
|
B:GLU323
|
4.7
|
79.1
|
1.0
|
|
PA
|
B:ADP603
|
4.8
|
20.0
|
1.0
|
|
Magnesium binding site 5 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 5 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg602
b:21.5
occ:1.00
|
OG1
|
C:THR57
|
1.6
|
57.7
|
1.0
|
|
O2G
|
C:ATP601
|
1.7
|
78.9
|
1.0
|
|
HG1
|
C:THR57
|
1.9
|
57.1
|
1.0
|
|
CB
|
C:THR57
|
2.9
|
62.6
|
1.0
|
|
OE2
|
C:GLU82
|
2.9
|
73.6
|
1.0
|
|
PG
|
C:ATP601
|
3.0
|
83.0
|
1.0
|
|
HB
|
C:THR57
|
3.1
|
58.9
|
1.0
|
|
HG23
|
C:THR57
|
3.3
|
59.1
|
1.0
|
|
HH21
|
D:ARG230
|
3.3
|
52.3
|
1.0
|
|
O3B
|
C:ATP601
|
3.6
|
69.5
|
1.0
|
|
O3G
|
C:ATP601
|
3.6
|
80.6
|
1.0
|
|
H
|
C:THR57
|
3.6
|
59.8
|
1.0
|
|
CG2
|
C:THR57
|
3.6
|
59.7
|
1.0
|
|
HE
|
D:ARG230
|
3.6
|
51.3
|
1.0
|
|
OD1
|
C:ASP149
|
3.6
|
69.9
|
1.0
|
|
OD2
|
C:ASP149
|
3.7
|
78.3
|
1.0
|
|
O2A
|
C:ATP601
|
3.8
|
55.6
|
1.0
|
|
NH2
|
D:ARG230
|
3.8
|
52.1
|
1.0
|
|
O3A
|
C:ATP601
|
3.9
|
58.5
|
1.0
|
|
HG21
|
C:THR57
|
3.9
|
57.5
|
1.0
|
|
CA
|
C:THR57
|
4.0
|
48.0
|
1.0
|
|
N
|
C:THR57
|
4.1
|
58.4
|
1.0
|
|
CG
|
C:ASP149
|
4.1
|
74.5
|
1.0
|
|
O1G
|
C:ATP601
|
4.2
|
70.9
|
1.0
|
|
NE
|
D:ARG230
|
4.2
|
47.1
|
1.0
|
|
HA
|
C:THR57
|
4.2
|
57.3
|
1.0
|
|
CD
|
C:GLU82
|
4.2
|
73.0
|
1.0
|
|
HH22
|
D:ARG230
|
4.3
|
52.3
|
1.0
|
|
CZ
|
D:ARG230
|
4.3
|
50.9
|
1.0
|
|
HG22
|
C:THR57
|
4.4
|
57.1
|
1.0
|
|
PB
|
C:ATP601
|
4.5
|
57.5
|
1.0
|
|
PA
|
C:ATP601
|
4.5
|
53.7
|
1.0
|
|
HG3
|
C:GLU82
|
4.7
|
68.9
|
1.0
|
|
HB2
|
C:LYS56
|
4.7
|
52.6
|
1.0
|
|
HZ3
|
D:LYS228
|
4.9
|
49.6
|
1.0
|
|
Magnesium binding site 6 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 6 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg604
b:20.0
occ:1.00
|
HG1
|
C:THR299
|
2.4
|
68.1
|
1.0
|
|
OG1
|
C:THR299
|
2.4
|
65.2
|
1.0
|
|
O1B
|
C:ADP603
|
2.6
|
20.0
|
1.0
|
|
O3B
|
C:ADP603
|
3.2
|
20.0
|
1.0
|
|
OE2
|
C:GLU323
|
3.3
|
84.3
|
1.0
|
|
OE1
|
C:GLU322
|
3.4
|
87.8
|
1.0
|
|
PB
|
C:ADP603
|
3.4
|
20.0
|
1.0
|
|
CB
|
C:THR299
|
3.8
|
74.6
|
1.0
|
|
HH21
|
D:ARG463
|
3.8
|
64.9
|
1.0
|
|
HG
|
C:SER383
|
3.8
|
84.0
|
1.0
|
|
H
|
C:THR299
|
3.9
|
69.2
|
1.0
|
|
OG
|
C:SER383
|
3.9
|
93.7
|
1.0
|
|
HB
|
C:THR299
|
4.1
|
70.4
|
1.0
|
|
HE2
|
C:LYS298
|
4.1
|
65.8
|
1.0
|
|
OD1
|
C:ASP382
|
4.2
|
74.5
|
1.0
|
|
O1A
|
C:ADP603
|
4.2
|
20.0
|
1.0
|
|
HB2
|
C:LYS298
|
4.3
|
65.0
|
1.0
|
|
NH2
|
D:ARG463
|
4.3
|
69.1
|
1.0
|
|
HG23
|
C:THR299
|
4.4
|
69.5
|
1.0
|
|
CD
|
C:GLU323
|
4.4
|
84.1
|
1.0
|
|
HG3
|
C:GLU323
|
4.4
|
79.8
|
1.0
|
|
O3A
|
C:ADP603
|
4.4
|
20.0
|
1.0
|
|
N
|
C:THR299
|
4.4
|
68.4
|
1.0
|
|
CD
|
C:GLU322
|
4.5
|
82.7
|
1.0
|
|
HB2
|
C:GLU322
|
4.5
|
79.2
|
1.0
|
|
CG2
|
C:THR299
|
4.6
|
77.5
|
1.0
|
|
CG
|
C:ASP382
|
4.6
|
77.2
|
1.0
|
|
HE
|
D:ARG463
|
4.6
|
63.2
|
1.0
|
|
OD2
|
C:ASP382
|
4.6
|
75.4
|
1.0
|
|
CA
|
C:THR299
|
4.6
|
60.8
|
1.0
|
|
HG2
|
C:GLU323
|
4.6
|
80.5
|
1.0
|
|
HG1
|
C:THR417
|
4.6
|
72.8
|
1.0
|
|
HG3
|
C:GLU322
|
4.6
|
78.5
|
1.0
|
|
HG21
|
C:THR299
|
4.6
|
69.4
|
1.0
|
|
O2B
|
C:ADP603
|
4.7
|
20.0
|
1.0
|
|
HH22
|
D:ARG463
|
4.7
|
65.9
|
1.0
|
|
HA
|
C:THR299
|
4.7
|
67.1
|
1.0
|
|
CG
|
C:GLU323
|
4.7
|
79.1
|
1.0
|
|
PA
|
C:ADP603
|
4.8
|
20.0
|
1.0
|
|
Magnesium binding site 7 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 7 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg602
b:21.5
occ:1.00
|
OG1
|
D:THR57
|
1.6
|
57.7
|
1.0
|
|
O2G
|
D:ATP601
|
1.7
|
78.9
|
1.0
|
|
HG1
|
D:THR57
|
1.9
|
57.1
|
1.0
|
|
CB
|
D:THR57
|
2.9
|
62.6
|
1.0
|
|
OE2
|
D:GLU82
|
2.9
|
73.6
|
1.0
|
|
PG
|
D:ATP601
|
3.0
|
83.0
|
1.0
|
|
HB
|
D:THR57
|
3.1
|
58.9
|
1.0
|
|
HG23
|
D:THR57
|
3.3
|
59.1
|
1.0
|
|
HH21
|
E:ARG230
|
3.3
|
52.3
|
1.0
|
|
O3B
|
D:ATP601
|
3.6
|
69.5
|
1.0
|
|
O3G
|
D:ATP601
|
3.6
|
80.6
|
1.0
|
|
H
|
D:THR57
|
3.6
|
59.8
|
1.0
|
|
CG2
|
D:THR57
|
3.6
|
59.7
|
1.0
|
|
HE
|
E:ARG230
|
3.6
|
51.3
|
1.0
|
|
OD1
|
D:ASP149
|
3.6
|
69.9
|
1.0
|
|
OD2
|
D:ASP149
|
3.7
|
78.3
|
1.0
|
|
O2A
|
D:ATP601
|
3.8
|
55.6
|
1.0
|
|
NH2
|
E:ARG230
|
3.8
|
52.1
|
1.0
|
|
O3A
|
D:ATP601
|
3.9
|
58.5
|
1.0
|
|
HG21
|
D:THR57
|
3.9
|
57.5
|
1.0
|
|
CA
|
D:THR57
|
4.0
|
48.0
|
1.0
|
|
N
|
D:THR57
|
4.1
|
58.4
|
1.0
|
|
CG
|
D:ASP149
|
4.1
|
74.5
|
1.0
|
|
O1G
|
D:ATP601
|
4.2
|
70.9
|
1.0
|
|
NE
|
E:ARG230
|
4.2
|
47.1
|
1.0
|
|
HA
|
D:THR57
|
4.2
|
57.3
|
1.0
|
|
CD
|
D:GLU82
|
4.2
|
73.0
|
1.0
|
|
HH22
|
E:ARG230
|
4.3
|
52.3
|
1.0
|
|
CZ
|
E:ARG230
|
4.3
|
50.9
|
1.0
|
|
HG22
|
D:THR57
|
4.4
|
57.1
|
1.0
|
|
PB
|
D:ATP601
|
4.5
|
57.5
|
1.0
|
|
PA
|
D:ATP601
|
4.5
|
53.7
|
1.0
|
|
HG3
|
D:GLU82
|
4.7
|
68.9
|
1.0
|
|
HB2
|
D:LYS56
|
4.7
|
52.6
|
1.0
|
|
HZ3
|
E:LYS228
|
4.9
|
49.6
|
1.0
|
|
Magnesium binding site 8 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 8 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg604
b:20.0
occ:1.00
|
HG1
|
D:THR299
|
2.4
|
68.1
|
1.0
|
|
OG1
|
D:THR299
|
2.4
|
65.2
|
1.0
|
|
O1B
|
D:ADP603
|
2.6
|
20.0
|
1.0
|
|
O3B
|
D:ADP603
|
3.2
|
20.0
|
1.0
|
|
OE2
|
D:GLU323
|
3.3
|
84.3
|
1.0
|
|
OE1
|
D:GLU322
|
3.4
|
87.8
|
1.0
|
|
PB
|
D:ADP603
|
3.4
|
20.0
|
1.0
|
|
CB
|
D:THR299
|
3.8
|
74.6
|
1.0
|
|
HH21
|
E:ARG463
|
3.8
|
64.9
|
1.0
|
|
HG
|
D:SER383
|
3.8
|
84.0
|
1.0
|
|
H
|
D:THR299
|
3.9
|
69.2
|
1.0
|
|
OG
|
D:SER383
|
3.9
|
93.7
|
1.0
|
|
HB
|
D:THR299
|
4.1
|
70.4
|
1.0
|
|
HE2
|
D:LYS298
|
4.1
|
65.8
|
1.0
|
|
OD1
|
D:ASP382
|
4.2
|
74.5
|
1.0
|
|
O1A
|
D:ADP603
|
4.2
|
20.0
|
1.0
|
|
HB2
|
D:LYS298
|
4.3
|
65.0
|
1.0
|
|
NH2
|
E:ARG463
|
4.3
|
69.1
|
1.0
|
|
HG23
|
D:THR299
|
4.4
|
69.5
|
1.0
|
|
CD
|
D:GLU323
|
4.4
|
84.1
|
1.0
|
|
HG3
|
D:GLU323
|
4.4
|
79.8
|
1.0
|
|
O3A
|
D:ADP603
|
4.4
|
20.0
|
1.0
|
|
N
|
D:THR299
|
4.4
|
68.4
|
1.0
|
|
CD
|
D:GLU322
|
4.5
|
82.7
|
1.0
|
|
HB2
|
D:GLU322
|
4.5
|
79.2
|
1.0
|
|
CG2
|
D:THR299
|
4.5
|
77.5
|
1.0
|
|
HE
|
E:ARG463
|
4.6
|
63.2
|
1.0
|
|
CG
|
D:ASP382
|
4.6
|
77.2
|
1.0
|
|
OD2
|
D:ASP382
|
4.6
|
75.4
|
1.0
|
|
CA
|
D:THR299
|
4.6
|
60.8
|
1.0
|
|
HG2
|
D:GLU323
|
4.6
|
80.5
|
1.0
|
|
HG1
|
D:THR417
|
4.6
|
72.8
|
1.0
|
|
HG3
|
D:GLU322
|
4.6
|
78.5
|
1.0
|
|
HG21
|
D:THR299
|
4.6
|
69.4
|
1.0
|
|
HH22
|
E:ARG463
|
4.6
|
65.9
|
1.0
|
|
O2B
|
D:ADP603
|
4.7
|
20.0
|
1.0
|
|
HA
|
D:THR299
|
4.7
|
67.1
|
1.0
|
|
CG
|
D:GLU323
|
4.7
|
79.1
|
1.0
|
|
PA
|
D:ADP603
|
4.8
|
20.0
|
1.0
|
|
Magnesium binding site 9 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 9 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg602
b:21.5
occ:1.00
|
OG1
|
E:THR57
|
1.6
|
57.7
|
1.0
|
|
O2G
|
E:ATP601
|
1.7
|
78.9
|
1.0
|
|
HG1
|
E:THR57
|
1.9
|
57.1
|
1.0
|
|
CB
|
E:THR57
|
2.9
|
62.6
|
1.0
|
|
OE2
|
E:GLU82
|
2.9
|
73.6
|
1.0
|
|
PG
|
E:ATP601
|
3.0
|
83.0
|
1.0
|
|
HB
|
E:THR57
|
3.1
|
58.9
|
1.0
|
|
HH21
|
F:ARG230
|
3.3
|
52.3
|
1.0
|
|
HG23
|
E:THR57
|
3.3
|
59.1
|
1.0
|
|
O3B
|
E:ATP601
|
3.6
|
69.5
|
1.0
|
|
O3G
|
E:ATP601
|
3.6
|
80.6
|
1.0
|
|
CG2
|
E:THR57
|
3.6
|
59.7
|
1.0
|
|
H
|
E:THR57
|
3.6
|
59.8
|
1.0
|
|
HE
|
F:ARG230
|
3.6
|
51.3
|
1.0
|
|
OD1
|
E:ASP149
|
3.6
|
69.9
|
1.0
|
|
OD2
|
E:ASP149
|
3.7
|
78.3
|
1.0
|
|
NH2
|
F:ARG230
|
3.8
|
52.1
|
1.0
|
|
O2A
|
E:ATP601
|
3.8
|
55.6
|
1.0
|
|
O3A
|
E:ATP601
|
3.9
|
58.5
|
1.0
|
|
HG21
|
E:THR57
|
3.9
|
57.5
|
1.0
|
|
CA
|
E:THR57
|
4.0
|
48.0
|
1.0
|
|
N
|
E:THR57
|
4.1
|
58.4
|
1.0
|
|
CG
|
E:ASP149
|
4.1
|
74.5
|
1.0
|
|
NE
|
F:ARG230
|
4.2
|
47.1
|
1.0
|
|
O1G
|
E:ATP601
|
4.2
|
70.9
|
1.0
|
|
HA
|
E:THR57
|
4.2
|
57.3
|
1.0
|
|
CD
|
E:GLU82
|
4.2
|
73.0
|
1.0
|
|
HH22
|
F:ARG230
|
4.3
|
52.3
|
1.0
|
|
CZ
|
F:ARG230
|
4.3
|
50.9
|
1.0
|
|
HG22
|
E:THR57
|
4.4
|
57.1
|
1.0
|
|
PB
|
E:ATP601
|
4.5
|
57.5
|
1.0
|
|
PA
|
E:ATP601
|
4.5
|
53.7
|
1.0
|
|
HG3
|
E:GLU82
|
4.7
|
68.9
|
1.0
|
|
HB2
|
E:LYS56
|
4.7
|
52.6
|
1.0
|
|
HZ3
|
F:LYS228
|
4.9
|
49.6
|
1.0
|
|
Magnesium binding site 10 out
of 12 in 8jon
Go back to
Magnesium Binding Sites List in 8jon
Magnesium binding site 10 out
of 12 in the Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of A Synthetic Circadian Clock Protein Kaic Mutant of Cyanobacteria Synechococcus Elongatus Pcc 7942 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg604
b:20.0
occ:1.00
|
HG1
|
E:THR299
|
2.4
|
68.1
|
1.0
|
|
OG1
|
E:THR299
|
2.4
|
65.2
|
1.0
|
|
O1B
|
E:ADP603
|
2.6
|
20.0
|
1.0
|
|
O3B
|
E:ADP603
|
3.2
|
20.0
|
1.0
|
|
OE2
|
E:GLU323
|
3.3
|
84.3
|
1.0
|
|
OE1
|
E:GLU322
|
3.4
|
87.8
|
1.0
|
|
PB
|
E:ADP603
|
3.4
|
20.0
|
1.0
|
|
CB
|
E:THR299
|
3.8
|
74.6
|
1.0
|
|
HH21
|
F:ARG463
|
3.8
|
64.9
|
1.0
|
|
HG
|
E:SER383
|
3.8
|
84.0
|
1.0
|
|
H
|
E:THR299
|
3.9
|
69.2
|
1.0
|
|
OG
|
E:SER383
|
3.9
|
93.7
|
1.0
|
|
HB
|
E:THR299
|
4.1
|
70.4
|
1.0
|
|
HE2
|
E:LYS298
|
4.1
|
65.8
|
1.0
|
|
OD1
|
E:ASP382
|
4.2
|
74.5
|
1.0
|
|
O1A
|
E:ADP603
|
4.2
|
20.0
|
1.0
|
|
HB2
|
E:LYS298
|
4.3
|
65.0
|
1.0
|
|
NH2
|
F:ARG463
|
4.3
|
69.1
|
1.0
|
|
HG23
|
E:THR299
|
4.4
|
69.5
|
1.0
|
|
CD
|
E:GLU323
|
4.4
|
84.1
|
1.0
|
|
HG3
|
E:GLU323
|
4.4
|
79.8
|
1.0
|
|
O3A
|
E:ADP603
|
4.4
|
20.0
|
1.0
|
|
N
|
E:THR299
|
4.4
|
68.4
|
1.0
|
|
CD
|
E:GLU322
|
4.5
|
82.7
|
1.0
|
|
HB2
|
E:GLU322
|
4.5
|
79.2
|
1.0
|
|
CG2
|
E:THR299
|
4.6
|
77.5
|
1.0
|
|
CG
|
E:ASP382
|
4.6
|
77.2
|
1.0
|
|
HE
|
F:ARG463
|
4.6
|
63.2
|
1.0
|
|
OD2
|
E:ASP382
|
4.6
|
75.4
|
1.0
|
|
CA
|
E:THR299
|
4.6
|
60.8
|
1.0
|
|
HG2
|
E:GLU323
|
4.6
|
80.5
|
1.0
|
|
HG1
|
E:THR417
|
4.6
|
72.8
|
1.0
|
|
HG3
|
E:GLU322
|
4.6
|
78.5
|
1.0
|
|
HG21
|
E:THR299
|
4.6
|
69.4
|
1.0
|
|
O2B
|
E:ADP603
|
4.7
|
20.0
|
1.0
|
|
HH22
|
F:ARG463
|
4.7
|
65.9
|
1.0
|
|
HA
|
E:THR299
|
4.7
|
67.1
|
1.0
|
|
CG
|
E:GLU323
|
4.7
|
79.1
|
1.0
|
|
PA
|
E:ADP603
|
4.8
|
20.0
|
1.0
|
|
Reference:
S.Li,
Y.Wan.
Adaptation of Ancient Cyanobacterial Clock to the Day Length ~ 0.95 Ga Ago To Be Published.
Page generated: Fri Oct 4 13:14:28 2024
|
