Magnesium in PDB 8jp3: Fcp Trimer in Diatom Thalassiosira Pseudonana

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 33;

Binding sites:

The binding sites of Magnesium atom in the Fcp Trimer in Diatom Thalassiosira Pseudonana (pdb code 8jp3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 33 binding sites of Magnesium where determined in the Fcp Trimer in Diatom Thalassiosira Pseudonana, PDB code: 8jp3:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg308 b:92.5 occ:1.00 MG A:CLA308 0.0 92.5 1.0 NB A:CLA308 2.0 92.5 1.0 ND A:CLA308 2.0 92.5 1.0 NC A:CLA308 2.1 92.5 1.0 NA A:CLA308 2.1 92.5 1.0 C4D A:CLA308 2.9 92.5 1.0 C1B A:CLA308 3.0 92.5 1.0 C4A A:CLA308 3.0 92.5 1.0 C4B A:CLA308 3.1 92.5 1.0 C1C A:CLA308 3.1 92.5 1.0 C4C A:CLA308 3.1 92.5 1.0 C1A A:CLA308 3.2 92.5 1.0 C1D A:CLA308 3.2 92.5 1.0 CHB A:CLA308 3.4 92.5 1.0 CHC A:CLA308 3.4 92.5 1.0 CHA A:CLA308 3.5 92.5 1.0 CHD A:CLA308 3.5 92.5 1.0 C3D A:CLA308 4.3 92.5 1.0 C2B A:CLA308 4.3 92.5 1.0 C3B A:CLA308 4.3 92.5 1.0 C2C A:CLA308 4.3 92.5 1.0 C2D A:CLA308 4.4 92.5 1.0 C3C A:CLA308 4.4 92.5 1.0 C3A A:CLA308 4.4 92.5 1.0 O A:ALA39 4.5 92.5 1.0 C2A A:CLA308 4.5 92.5 1.0 NE2 A:GLN38 4.8 92.7 1.0 CBD A:CLA308 4.9 92.5 1.0 CBA A:CLA308 5.0 92.5 1.0

Magnesium binding site 2 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg309 b:92.5 occ:1.00 MG A:CLA309 0.0 92.5 1.0 NB A:CLA309 2.0 92.5 1.0 ND A:CLA309 2.0 92.5 1.0 NC A:CLA309 2.1 92.5 1.0 NA A:CLA309 2.1 92.5 1.0 C4D A:CLA309 2.9 92.5 1.0 OE2 A:GLU66 3.0 87.5 1.0 C1B A:CLA309 3.0 92.5 1.0 C4A A:CLA309 3.0 92.5 1.0 C4B A:CLA309 3.1 92.5 1.0 C1C A:CLA309 3.1 92.5 1.0 C4C A:CLA309 3.1 92.5 1.0 C1A A:CLA309 3.1 92.5 1.0 C1D A:CLA309 3.2 92.5 1.0 CHB A:CLA309 3.4 92.5 1.0 CHC A:CLA309 3.4 92.5 1.0 CHA A:CLA309 3.5 92.5 1.0 CHD A:CLA309 3.5 92.5 1.0 CD A:GLU66 3.6 87.5 1.0 C1 A:CLA309 3.9 92.5 1.0 NE A:ARG179 4.2 87.1 1.0 CG A:GLU66 4.2 87.5 1.0 OE1 A:GLU66 4.3 87.5 1.0 C3D A:CLA309 4.3 92.5 1.0 C2B A:CLA309 4.3 92.5 1.0 C3B A:CLA309 4.3 92.5 1.0 C2C A:CLA309 4.3 92.5 1.0 C2D A:CLA309 4.4 92.5 1.0 C3C A:CLA309 4.4 92.5 1.0 C3A A:CLA309 4.4 92.5 1.0 C2A A:CLA309 4.5 92.5 1.0 NH2 A:ARG179 4.6 87.1 1.0 O2A A:CLA309 4.6 92.5 1.0 CZ A:ARG179 4.7 87.1 1.0 CBA A:CLA309 4.9 92.5 1.0 CBD A:CLA309 4.9 92.5 1.0 CD A:ARG179 4.9 87.1 1.0

Magnesium binding site 3 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg310 b:92.5 occ:1.00 MG A:KC2310 0.0 92.5 1.0 ND A:KC2310 2.0 92.5 1.0 NB A:KC2310 2.0 92.5 1.0 NC A:KC2310 2.1 92.5 1.0 NA A:KC2310 2.1 92.5 1.0 NE2 A:HIS69 2.8 85.8 1.0 C4D A:KC2310 2.9 92.5 1.0 C1B A:KC2310 3.0 92.5 1.0 C4B A:KC2310 3.0 92.5 1.0 C1D A:KC2310 3.0 92.5 1.0 C4C A:KC2310 3.1 92.5 1.0 C4A A:KC2310 3.1 92.5 1.0 C1C A:KC2310 3.1 92.5 1.0 C1A A:KC2310 3.1 92.5 1.0 CHB A:KC2310 3.4 92.5 1.0 CE1 A:HIS69 3.5 85.8 1.0 CHA A:KC2310 3.5 92.5 1.0 CHC A:KC2310 3.5 92.5 1.0 CHD A:KC2310 3.5 92.5 1.0 C8 A:CLA313 3.8 92.5 1.0 C9 A:CLA313 3.9 92.5 1.0 CD2 A:HIS69 3.9 85.8 1.0 C3D A:KC2310 4.1 92.5 1.0 C2D A:KC2310 4.2 92.5 1.0 C2B A:KC2310 4.2 92.5 1.0 C3B A:KC2310 4.2 92.5 1.0 C2C A:KC2310 4.3 92.5 1.0 C3A A:KC2310 4.3 92.5 1.0 C3C A:KC2310 4.3 92.5 1.0 C24 A:A86306 4.3 93.2 1.0 C2A A:KC2310 4.3 92.5 1.0 C10 A:CLA313 4.4 92.5 1.0 C2 A:A86306 4.5 93.2 1.0 ND1 A:HIS69 4.7 85.8 1.0 CG A:HIS69 4.9 85.8 1.0 C11 A:CLA313 4.9 92.5 1.0 CBD A:KC2310 4.9 92.5 1.0 C1 A:A86306 5.0 93.2 1.0

Magnesium binding site 4 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg311 b:92.5 occ:1.00 MG A:CLA311 0.0 92.5 1.0 NB A:CLA311 2.0 92.5 1.0 ND A:CLA311 2.0 92.5 1.0 NC A:CLA311 2.1 92.5 1.0 NA A:CLA311 2.1 92.5 1.0 C4D A:CLA311 2.9 92.5 1.0 C1B A:CLA311 3.0 92.5 1.0 C4A A:CLA311 3.0 92.5 1.0 C4B A:CLA311 3.1 92.5 1.0 C1C A:CLA311 3.1 92.5 1.0 C4C A:CLA311 3.1 92.5 1.0 C1A A:CLA311 3.1 92.5 1.0 C1D A:CLA311 3.2 92.5 1.0 CHB A:CLA311 3.4 92.5 1.0 CHC A:CLA311 3.4 92.5 1.0 CHA A:CLA311 3.5 92.5 1.0 CHD A:CLA311 3.5 92.5 1.0 C2 A:CLA311 3.7 92.5 1.0 O2A A:CLA311 4.0 92.5 1.0 C1 A:CLA311 4.1 92.5 1.0 C3 A:CLA311 4.2 92.5 1.0 C3D A:CLA311 4.3 92.5 1.0 C2B A:CLA311 4.3 92.5 1.0 C3B A:CLA311 4.3 92.5 1.0 C2C A:CLA311 4.3 92.5 1.0 C2D A:CLA311 4.4 92.5 1.0 C3C A:CLA311 4.4 92.5 1.0 C3A A:CLA311 4.4 92.5 1.0 C2A A:CLA311 4.5 92.5 1.0 CA A:GLY79 4.6 87.1 1.0 C5 A:CLA311 4.6 92.5 1.0 OG1 A:THR83 4.7 88.3 1.0 C6 A:CLA311 4.8 92.5 1.0 CGA A:CLA311 4.9 92.5 1.0 CBD A:CLA311 4.9 92.5 1.0

Magnesium binding site 5 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg312 b:95.4 occ:1.00 MG A:KC2312 0.0 95.4 1.0 ND A:KC2312 2.0 95.4 1.0 NB A:KC2312 2.0 95.4 1.0 NC A:KC2312 2.1 95.4 1.0 NA A:KC2312 2.1 95.4 1.0 OE1 A:GLN123 2.9 92.4 1.0 C4D A:KC2312 2.9 95.4 1.0 C1B A:KC2312 3.0 95.4 1.0 C4B A:KC2312 3.0 95.4 1.0 C1D A:KC2312 3.0 95.4 1.0 C4C A:KC2312 3.1 95.4 1.0 C4A A:KC2312 3.1 95.4 1.0 C1C A:KC2312 3.1 95.4 1.0 C1A A:KC2312 3.1 95.4 1.0 CHB A:KC2312 3.4 95.4 1.0 CHA A:KC2312 3.5 95.4 1.0 CHC A:KC2312 3.5 95.4 1.0 CHD A:KC2312 3.5 95.4 1.0 CD A:GLN123 3.6 92.4 1.0 NE2 A:GLN123 4.0 92.4 1.0 C3D A:KC2312 4.1 95.4 1.0 C2D A:KC2312 4.2 95.4 1.0 C2B A:KC2312 4.2 95.4 1.0 C3B A:KC2312 4.2 95.4 1.0 C2C A:KC2312 4.3 95.4 1.0 C3A A:KC2312 4.3 95.4 1.0 C3C A:KC2312 4.3 95.4 1.0 C2A A:KC2312 4.4 95.4 1.0 CG A:GLN123 4.8 92.4 1.0 CB A:GLN123 4.9 92.4 1.0 CBD A:KC2312 4.9 95.4 1.0

Magnesium binding site 6 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg313 b:92.5 occ:1.00 MG A:CLA313 0.0 92.5 1.0 NB A:CLA313 2.0 92.5 1.0 ND A:CLA313 2.0 92.5 1.0 NC A:CLA313 2.1 92.5 1.0 NA A:CLA313 2.1 92.5 1.0 C4D A:CLA313 2.9 92.5 1.0 C1B A:CLA313 3.0 92.5 1.0 OE2 A:GLU132 3.0 90.8 1.0 C4A A:CLA313 3.0 92.5 1.0 C4B A:CLA313 3.1 92.5 1.0 C1C A:CLA313 3.1 92.5 1.0 C4C A:CLA313 3.1 92.5 1.0 C1D A:CLA313 3.1 92.5 1.0 C1A A:CLA313 3.1 92.5 1.0 CHB A:CLA313 3.4 92.5 1.0 CHC A:CLA313 3.4 92.5 1.0 CHA A:CLA313 3.5 92.5 1.0 CHD A:CLA313 3.5 92.5 1.0 CD A:GLU132 3.6 90.8 1.0 CG A:GLU132 4.1 90.8 1.0 C3D A:CLA313 4.3 92.5 1.0 C2B A:CLA313 4.3 92.5 1.0 OE1 A:GLU132 4.3 90.8 1.0 C3B A:CLA313 4.3 92.5 1.0 C2C A:CLA313 4.3 92.5 1.0 C2D A:CLA313 4.4 92.5 1.0 C3C A:CLA313 4.4 92.5 1.0 C3A A:CLA313 4.4 92.5 1.0 CMD A:KC2310 4.4 92.5 1.0 NZ A:LYS68 4.4 86.6 1.0 C2A A:CLA313 4.5 92.5 1.0 CE A:LYS68 4.7 86.6 1.0 CBA A:CLA313 4.9 92.5 1.0 CBD A:CLA313 4.9 92.5 1.0

Magnesium binding site 7 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg314 b:92.5 occ:1.00 MG A:CLA314 0.0 92.5 1.0 NB A:CLA314 2.0 92.5 1.0 ND A:CLA314 2.0 92.5 1.0 NA A:CLA314 2.1 92.5 1.0 NC A:CLA314 2.1 92.5 1.0 C4D A:CLA314 2.9 92.5 1.0 C1B A:CLA314 3.0 92.5 1.0 OE2 A:GLU174 3.0 87.9 1.0 C4A A:CLA314 3.0 92.5 1.0 C4B A:CLA314 3.1 92.5 1.0 C1C A:CLA314 3.1 92.5 1.0 C4C A:CLA314 3.1 92.5 1.0 C1A A:CLA314 3.1 92.5 1.0 C1D A:CLA314 3.2 92.5 1.0 CHB A:CLA314 3.4 92.5 1.0 CHC A:CLA314 3.4 92.5 1.0 CHA A:CLA314 3.5 92.5 1.0 CHD A:CLA314 3.5 92.5 1.0 CD A:GLU174 3.7 87.9 1.0 C26 A:A86304 3.7 92.5 1.0 C29 A:A86304 4.1 92.5 1.0 CG A:GLU174 4.2 87.9 1.0 C3D A:CLA314 4.3 92.5 1.0 C2B A:CLA314 4.3 92.5 1.0 C3B A:CLA314 4.3 92.5 1.0 C2C A:CLA314 4.3 92.5 1.0 C2D A:CLA314 4.4 92.5 1.0 C3C A:CLA314 4.4 92.5 1.0 C27 A:A86304 4.4 92.5 1.0 OE1 A:GLU174 4.4 87.9 1.0 C3A A:CLA314 4.4 92.5 1.0 C2A A:CLA314 4.5 92.5 1.0 NE A:ARG71 4.5 86.6 1.0 NH2 A:ARG71 4.7 86.6 1.0 CB A:GLU174 4.7 87.9 1.0 C25 A:A86304 4.7 92.5 1.0 C24 A:A86304 4.7 92.5 1.0 CBD A:CLA314 4.9 92.5 1.0

Magnesium binding site 8 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg315 b:92.5 occ:1.00 MG A:KC1315 0.0 92.5 1.0 ND A:KC1315 2.0 92.5 1.0 NB A:KC1315 2.0 92.5 1.0 NC A:KC1315 2.0 92.5 1.0 NA A:KC1315 2.1 92.5 1.0 C4D A:KC1315 2.9 92.5 1.0 C1B A:KC1315 2.9 92.5 1.0 C4B A:KC1315 3.0 92.5 1.0 C1D A:KC1315 3.0 92.5 1.0 C4A A:KC1315 3.1 92.5 1.0 C4C A:KC1315 3.1 92.5 1.0 C1C A:KC1315 3.1 92.5 1.0 OD1 A:ASN177 3.1 87.8 1.0 C1A A:KC1315 3.1 92.5 1.0 CHB A:KC1315 3.4 92.5 1.0 CHC A:KC1315 3.4 92.5 1.0 CHA A:KC1315 3.5 92.5 1.0 CHD A:KC1315 3.5 92.5 1.0 C9 A:CLA308 3.5 92.5 1.0 ND2 A:ASN177 3.6 87.8 1.0 CG A:ASN177 3.6 87.8 1.0 C8 A:CLA308 3.9 92.5 1.0 C3D A:KC1315 4.1 92.5 1.0 C2D A:KC1315 4.1 92.5 1.0 C2B A:KC1315 4.2 92.5 1.0 C3B A:KC1315 4.2 92.5 1.0 C3A A:KC1315 4.3 92.5 1.0 C3C A:KC1315 4.3 92.5 1.0 C2C A:KC1315 4.3 92.5 1.0 C2A A:KC1315 4.3 92.5 1.0 C10 A:CLA308 4.5 92.5 1.0 C7 A:A86305 4.9 92.5 1.0 CBD A:KC1315 4.9 92.5 1.0 CB A:ASN177 5.0 87.8 1.0 C2 A:A86307 5.0 99.2 1.0

Magnesium binding site 9 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg316 b:94.1 occ:1.00 MG A:CLA316 0.0 94.1 1.0 NB A:CLA316 2.0 94.1 1.0 ND A:CLA316 2.0 94.1 1.0 NC A:CLA316 2.1 94.1 1.0 NA A:CLA316 2.1 94.1 1.0 NE2 A:HIS191 2.9 90.1 1.0 C4D A:CLA316 2.9 94.1 1.0 C1B A:CLA316 3.0 94.1 1.0 C4A A:CLA316 3.0 94.1 1.0 C4B A:CLA316 3.1 94.1 1.0 C1C A:CLA316 3.1 94.1 1.0 C4C A:CLA316 3.1 94.1 1.0 C1D A:CLA316 3.2 94.1 1.0 C1A A:CLA316 3.2 94.1 1.0 CHB A:CLA316 3.4 94.1 1.0 CHC A:CLA316 3.4 94.1 1.0 CHA A:CLA316 3.5 94.1 1.0 CHD A:CLA316 3.5 94.1 1.0 CE1 A:HIS191 3.8 90.1 1.0 C2 A:CLA316 3.8 94.1 1.0 CD2 A:HIS191 3.9 90.1 1.0 O2A A:CLA316 4.0 94.1 1.0 C1 A:CLA316 4.2 94.1 1.0 C3D A:CLA316 4.3 94.1 1.0 C2B A:CLA316 4.3 94.1 1.0 C3B A:CLA316 4.3 94.1 1.0 C2C A:CLA316 4.3 94.1 1.0 C2D A:CLA316 4.4 94.1 1.0 C3C A:CLA316 4.4 94.1 1.0 C3A A:CLA316 4.4 94.1 1.0 C24 A:A86301 4.5 94.5 1.0 C2A A:CLA316 4.5 94.1 1.0 C3 A:CLA316 4.7 94.1 1.0 C2 A:A86301 4.7 94.5 1.0 ND1 A:HIS191 4.9 90.1 1.0 CBD A:CLA316 4.9 94.1 1.0 CD2 A:LEU203 4.9 95.0 1.0 CG A:HIS191 5.0 90.1 1.0

Magnesium binding site 10 out of 33 in the Fcp Trimer in Diatom Thalassiosira Pseudonana


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Fcp Trimer in Diatom Thalassiosira Pseudonana within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg317 b:98.4 occ:1.00 MG A:CLA317 0.0 98.4 1.0 NB A:CLA317 2.0 98.4 1.0 ND A:CLA317 2.0 98.4 1.0 NC A:CLA317 2.1 98.4 1.0 NA A:CLA317 2.1 98.4 1.0 C4D A:CLA317 2.9 98.4 1.0 C1B A:CLA317 3.0 98.4 1.0 C4A A:CLA317 3.0 98.4 1.0 C4B A:CLA317 3.1 98.4 1.0 C1C A:CLA317 3.1 98.4 1.0 C4C A:CLA317 3.1 98.4 1.0 C1A A:CLA317 3.2 98.4 1.0 C1D A:CLA317 3.2 98.4 1.0 O1 A:A86306 3.2 93.2 1.0 CHB A:CLA317 3.4 98.4 1.0 CHC A:CLA317 3.4 98.4 1.0 CHA A:CLA317 3.5 98.4 1.0 CHD A:CLA317 3.5 98.4 1.0 C22 A:A86306 3.7 93.2 1.0 O2A A:CLA317 4.0 98.4 1.0 C20 A:A86306 4.2 93.2 1.0 C3D A:CLA317 4.3 98.4 1.0 C2B A:CLA317 4.3 98.4 1.0 C3B A:CLA317 4.3 98.4 1.0 C2C A:CLA317 4.3 98.4 1.0 C2 A:CLA317 4.4 98.4 1.0 C2D A:CLA317 4.4 98.4 1.0 C3C A:CLA317 4.4 98.4 1.0 C1 A:CLA317 4.4 98.4 1.0 C3A A:CLA317 4.4 98.4 1.0 C3 A:CLA317 4.4 98.4 1.0 C2A A:CLA317 4.5 98.4 1.0 C19 A:A86306 4.5 93.2 1.0 C21 A:A86306 4.5 93.2 1.0 C5 A:CLA317 4.5 98.4 1.0 C15 A:A86306 4.6 93.2 1.0 C14 A:A86306 4.6 93.2 1.0 C18 A:A86306 4.7 93.2 1.0 C16 A:A86306 4.7 93.2 1.0 CBD A:CLA317 4.9 98.4 1.0

Y.Feng, Z.Li, C.C.Zhou, W.Wang, J.R.Shen. Fcp Trimer in Diatom Thalassiosira Pseudonana To Be Published.