Magnesium in PDB 8jpe: Focused Refinement Structure of Galpha(Q) in NTSR1-GRK2-Galpha(Q) Complexes

The structure of Focused Refinement Structure of Galpha(Q) in NTSR1-GRK2-Galpha(Q) Complexes also contains other interesting chemical elements:

Aluminium	(Al)	1 atom
Fluorine	(F)	4 atoms

The binding sites of Magnesium atom in the Focused Refinement Structure of Galpha(Q) in NTSR1-GRK2-Galpha(Q) Complexes (pdb code 8jpe). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Focused Refinement Structure of Galpha(Q) in NTSR1-GRK2-Galpha(Q) Complexes, PDB code: 8jpe:

Magnesium binding site 1 out of 1 in the Focused Refinement Structure of Galpha(Q) in NTSR1-GRK2-Galpha(Q) Complexes


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Focused Refinement Structure of Galpha(Q) in NTSR1-GRK2-Galpha(Q) Complexes within 5.0Å range: probe atom residue distance (Å) B Occ Q:Mg402 b:87.4 occ:1.00 O3B Q:GDP401 1.9 99.5 1.0 OG Q:SER53 1.9 91.8 1.0 F3 Q:ALF403 2.3 96.7 1.0 OG1 Q:THR186 2.5 89.8 1.0 CB Q:THR186 2.9 89.8 1.0 CB Q:SER53 3.0 91.8 1.0 PB Q:GDP401 3.4 99.5 1.0 N Q:THR186 3.8 89.8 1.0 AL Q:ALF403 3.8 96.7 1.0 F1 Q:ALF403 3.9 96.7 1.0 OD1 Q:ASP205 3.9 85.9 1.0 N Q:SER53 3.9 91.8 1.0 O2B Q:GDP401 4.0 99.5 1.0 CA Q:THR186 4.0 89.8 1.0 O2A Q:GDP401 4.0 99.5 1.0 CA Q:SER53 4.0 91.8 1.0 CG2 Q:THR186 4.0 89.8 1.0 O1B Q:GDP401 4.2 99.5 1.0 O3A Q:GDP401 4.2 99.5 1.0 O1A Q:GDP401 4.3 99.5 1.0 PA Q:GDP401 4.4 99.5 1.0 O Q:VAL184 4.4 101.1 1.0 F2 Q:ALF403 4.6 96.7 1.0 CG Q:ASP205 4.6 85.9 1.0 OD2 Q:ASP205 4.6 85.9 1.0 O Q:VAL206 4.9 80.0 1.0 C Q:PRO185 5.0 95.8 1.0 C Q:THR186 5.0 89.8 1.0

J.Duan, H.Liu, F.Zhao, Q.Yuan, Y.Ji, X.Cai, X.He, X.Li, J.Li, K.Wu, T.Gao, S.Zhu, S.Lin, M.W.Wang, X.Cheng, W.Yin, Y.Jiang, D.Yang, H.E.Xu. Gpcr Activation and GRK2 Assembly By A Biased Intracellular Agonist. Nature 2023.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-023-06395-9