Magnesium in PDB 8kgf: Structure of AMCAS12A with Crrna

The binding sites of Magnesium atom in the Structure of AMCAS12A with Crrna (pdb code 8kgf). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of AMCAS12A with Crrna, PDB code: 8kgf:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of AMCAS12A with Crrna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of AMCAS12A with Crrna within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1401 b:81.6 occ:1.00 OP2 G:A-4 2.0 28.5 1.0 O A:LYS747 2.0 114.8 1.0 C A:LYS747 3.2 115.9 1.0 P G:A-4 3.4 23.5 1.0 N A:LYS747 3.7 114.0 1.0 CA A:LYS747 3.9 115.4 1.0 C A:GLY746 4.1 112.6 1.0 O5' G:A-4 4.1 11.0 1.0 OP1 G:A-4 4.2 26.4 1.0 N A:PRO748 4.2 96.4 1.0 CB A:LYS747 4.3 110.6 1.0 O3' G:U-5 4.4 18.9 1.0 O A:GLY746 4.4 114.8 1.0 CA A:PRO748 4.5 95.7 1.0 OP2 G:U-5 4.5 16.9 1.0 OP1 G:U-5 4.5 27.5 1.0 C3' G:U-5 4.5 17.4 1.0 CA A:GLY746 4.7 112.5 1.0 O5' G:U-5 4.7 32.6 1.0 P G:U-5 4.8 14.7 1.0 OD1 A:ASP739 4.9 123.6 1.0 C A:PRO748 4.9 99.6 1.0

Magnesium binding site 2 out of 2 in the Structure of AMCAS12A with Crrna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of AMCAS12A with Crrna within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg101 b:79.3 occ:1.00 OP2 G:A-13 3.0 35.8 1.0 OP2 G:U-14 4.3 29.9 1.0 P G:A-13 4.4 30.4 1.0 O5' G:U-14 4.6 29.2 1.0 N7 G:A-13 4.7 16.2 1.0 O4 G:U-18 4.8 44.9 1.0 O5' G:A-13 4.9 27.6 1.0 C8 G:A-13 4.9 8.2 1.0 P G:U-14 5.0 40.4 1.0

Y.Feng, X.Zhang, J.Shi, P.Ma, J.Tang, X.Huang. A Novel Crispr/CAS12A in Complex with A Crrna. To Be Published.