Atomistry » Magnesium » PDB 8om0-8oum » 8omq
Atomistry »
  Magnesium »
    PDB 8om0-8oum »
      8omq »

Magnesium in PDB 8omq: Dna-Unbound Mutsbeta-Atp Complex (Straight Clamp Form)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Dna-Unbound Mutsbeta-Atp Complex (Straight Clamp Form) (pdb code 8omq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Dna-Unbound Mutsbeta-Atp Complex (Straight Clamp Form), PDB code: 8omq:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8omq

Go back to Magnesium Binding Sites List in 8omq
Magnesium binding site 1 out of 2 in the Dna-Unbound Mutsbeta-Atp Complex (Straight Clamp Form)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Dna-Unbound Mutsbeta-Atp Complex (Straight Clamp Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg2001

b:19.9
occ:1.00
O2G B:ATP2000 1.8 31.5 1.0
OG B:SER903 2.1 61.5 1.0
O2B B:ATP2000 2.2 24.1 1.0
OE2 B:GLU976 2.8 84.9 1.0
OD2 B:ASP975 3.2 47.9 1.0
PG B:ATP2000 3.2 31.9 1.0
PB B:ATP2000 3.3 24.6 1.0
CB B:SER903 3.3 53.5 1.0
OD1 B:ASP975 3.4 48.3 1.0
O3B B:ATP2000 3.6 27.7 1.0
CG B:ASP975 3.7 45.4 1.0
OG1 A:THR724 3.9 44.7 1.0
CD B:GLU976 3.9 84.6 1.0
O1B B:ATP2000 4.0 26.5 1.0
OG A:SER723 4.0 42.0 1.0
O1G B:ATP2000 4.1 32.5 1.0
CG2 A:THR724 4.1 53.0 1.0
N B:SER903 4.2 45.2 1.0
CA B:SER903 4.3 46.5 1.0
O3G B:ATP2000 4.3 32.6 1.0
CG B:GLU976 4.6 75.8 1.0
O1A B:ATP2000 4.6 22.7 1.0
O3A B:ATP2000 4.6 23.4 1.0
CB A:THR724 4.6 43.9 1.0
NZ B:LYS902 4.7 52.1 1.0
N A:THR724 4.8 37.3 1.0
OE1 B:GLU976 4.9 86.8 1.0
O2A B:ATP2000 4.9 23.1 1.0
PA B:ATP2000 4.9 20.1 1.0
CG1 B:VAL1008 5.0 32.3 1.0
CB B:LYS902 5.0 47.9 1.0

Magnesium binding site 2 out of 2 in 8omq

Go back to Magnesium Binding Sites List in 8omq
Magnesium binding site 2 out of 2 in the Dna-Unbound Mutsbeta-Atp Complex (Straight Clamp Form)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Dna-Unbound Mutsbeta-Atp Complex (Straight Clamp Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2001

b:16.3
occ:1.00
OG A:SER676 1.9 55.2 1.0
O2B A:ATP2000 1.9 37.5 1.0
O2G A:ATP2000 2.1 46.3 1.0
OD2 A:ASP748 2.8 90.3 1.0
PB A:ATP2000 3.2 43.7 1.0
CB A:SER676 3.2 48.9 1.0
OG B:SER950 3.4 68.0 1.0
PG A:ATP2000 3.4 44.0 1.0
CG2 B:THR951 3.5 43.8 1.0
CG A:ASP748 3.6 87.2 1.0
OD1 A:ASP748 3.6 87.9 1.0
O3B A:ATP2000 3.6 44.1 1.0
OG1 B:THR951 3.7 42.8 1.0
O1B A:ATP2000 3.8 48.8 1.0
O1A A:ATP2000 4.1 44.6 1.0
O1G A:ATP2000 4.1 45.7 1.0
OD2 B:ASP943 4.2 104.3 1.0
CB B:THR951 4.2 41.0 1.0
N B:THR951 4.3 44.0 1.0
CA A:SER676 4.4 39.3 1.0
O3A A:ATP2000 4.4 42.2 1.0
N A:SER676 4.5 39.3 1.0
O3G A:ATP2000 4.6 45.4 1.0
PA A:ATP2000 4.6 40.1 1.0
O2A A:ATP2000 4.7 39.9 1.0
CB B:SER950 4.8 61.4 1.0
CA B:THR951 4.9 40.9 1.0

Reference:

J.-H.Lee, M.Thomsen, H.Daub, S.Steinbacher, A.Sztyler, G.Thieulin-Pardo, T.Neudegger, N.Plotnikov, R.R.Iyer, H.Wilkinson, E.Monteagudo, D.P.Felsenfeld, T.Haque, M.Finley, C.Dominguez, T.F.Vogt, B.C.Prasad. Dna-Unbound Mutsbeta-Atp Complex (Straight Clamp Form) To Be Published.
Page generated: Fri Oct 4 14:58:48 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy