Magnesium in PDB 8op4: Cryo-Em Structure of P5A-Atpase CTSPF1 (E1-Atp State)

The binding sites of Magnesium atom in the Cryo-Em Structure of P5A-Atpase CTSPF1 (E1-Atp State) (pdb code 8op4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of P5A-Atpase CTSPF1 (E1-Atp State), PDB code: 8op4:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of P5A-Atpase CTSPF1 (E1-Atp State)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of P5A-Atpase CTSPF1 (E1-Atp State) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1402 b:62.2 occ:1.00 O2G A:ANP1401 2.5 71.5 1.0 O A:THR501 2.6 61.7 1.0 OD2 A:ASP499 2.8 51.3 1.0 N A:GLY860 3.6 80.5 1.0 C A:THR501 3.7 52.2 1.0 O2B A:ANP1401 3.9 75.6 1.0 CG A:ASP499 4.0 53.7 1.0 OD1 A:ASN862 4.0 70.2 1.0 PG A:ANP1401 4.0 58.8 1.0 CA A:GLY860 4.1 80.8 1.0 ND2 A:ASN862 4.2 69.2 1.0 CB A:ASP859 4.3 73.5 1.0 O3G A:ANP1401 4.5 72.9 1.0 CG A:ASN862 4.6 66.7 1.0 CB A:THR501 4.6 51.2 1.0 C A:ASP859 4.6 76.6 1.0 N A:GLY502 4.6 43.1 1.0 OD1 A:ASP499 4.6 56.9 1.0 CA A:THR501 4.6 48.1 1.0 CA A:GLY502 4.7 49.1 1.0 N A:ASP859 4.7 70.1 1.0 O1G A:ANP1401 4.7 63.1 1.0 CG2 A:THR501 4.7 54.2 1.0 CA A:ASP859 4.8 71.9 1.0 OD2 A:ASP863 4.9 63.8 1.0 N A:THR501 4.9 47.3 1.0 CB A:ASP499 5.0 45.8 1.0

P.Li, P.Gourdon. Cryo-Em Structural Insights Into P5A-Atpase CTSPF1 To Be Published.