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Magnesium in PDB 8owu: The Crystal Structure of the Polymorphic Toxin PT7(Bc) D37A Mutant and Its Cognate Immunity PIM7(Bc) Complex

Protein crystallography data

The structure of The Crystal Structure of the Polymorphic Toxin PT7(Bc) D37A Mutant and Its Cognate Immunity PIM7(Bc) Complex, PDB code: 8owu was solved by N.Tzarum, R.Fraenkel, N.Deouell, I.Cahana, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.64 / 2.54
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 36.607, 51.912, 54.52, 94.69, 91.36, 101.68
R / Rfree (%) 21.4 / 26.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of the Polymorphic Toxin PT7(Bc) D37A Mutant and Its Cognate Immunity PIM7(Bc) Complex (pdb code 8owu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of the Polymorphic Toxin PT7(Bc) D37A Mutant and Its Cognate Immunity PIM7(Bc) Complex, PDB code: 8owu:

Magnesium binding site 1 out of 1 in 8owu

Go back to Magnesium Binding Sites List in 8owu
Magnesium binding site 1 out of 1 in the The Crystal Structure of the Polymorphic Toxin PT7(Bc) D37A Mutant and Its Cognate Immunity PIM7(Bc) Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of the Polymorphic Toxin PT7(Bc) D37A Mutant and Its Cognate Immunity PIM7(Bc) Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg101

b:77.2
occ:1.00
OD1 D:ASP17 2.0 85.8 1.0
CD2 B:HIS73 2.3 87.5 1.0
NE2 B:HIS49 2.4 77.2 1.0
NE2 B:HIS47 2.5 86.1 1.0
NE2 B:HIS73 2.7 90.2 1.0
CD2 B:HIS47 2.9 80.2 1.0
CG D:ASP17 3.0 81.1 1.0
CE1 B:HIS49 3.1 77.5 1.0
CE1 B:HIS47 3.5 81.5 1.0
CD2 B:HIS49 3.6 76.9 1.0
CG B:HIS73 3.6 89.7 1.0
OD2 D:ASP17 3.7 82.1 1.0
OG1 B:THR43 3.8 86.7 1.0
CB D:ASP17 4.0 68.4 1.0
CE1 B:HIS73 4.0 92.4 1.0
CG B:HIS47 4.1 77.9 1.0
ND1 B:HIS47 4.3 85.8 1.0
ND1 B:HIS49 4.3 72.9 1.0
CB B:THR43 4.4 85.2 1.0
ND1 B:HIS73 4.4 91.7 1.0
OD1 B:ASP40 4.6 81.6 1.0
CB B:HIS73 4.6 88.0 1.0
CG B:HIS49 4.6 72.9 1.0
CG2 B:THR43 4.7 83.2 1.0

Reference:

N.Nachmias, N.Dotan, M.Campos Rocha, R.Fraenkel, K.Detert, M.Kluzek, M.Shalom, S.Peedikayil-Kurien, G.Meitav, A.Rivitz, N.Shamash-Halevy, I.Cahana, N.Deouell, J.Klein, H.Schmidt, M.Oren-Suissa, N.Schlezinger, Y.Oppenheimer-Shaanan, N.Tzarum, A.Levy. Systematic Discovery of Antibacterial and Antifungal Bacterial Toxins To Be Published.
Page generated: Fri Oct 4 15:09:17 2024

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