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Magnesium in PDB 8oxo: Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide

Enzymatic activity of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide

All present enzymatic activity of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide:
2.7.11.1;

Other elements in 8oxo:

The structure of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide (pdb code 8oxo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide, PDB code: 8oxo:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8oxo

Go back to Magnesium Binding Sites List in 8oxo
Magnesium binding site 1 out of 2 in the Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg3102

b:149.8
occ:1.00
O2G A:ANP3101 2.1 157.6 1.0
O1A A:ANP3101 2.1 156.5 1.0
OD2 A:ASP2889 2.2 154.4 1.0
CG A:ASP2889 2.3 148.1 1.0
OD1 A:ASN2875 2.4 125.6 1.0
OD1 A:ASP2889 2.7 146.4 1.0
PG A:ANP3101 3.2 169.9 1.0
CB A:ASP2889 3.3 144.4 1.0
PA A:ANP3101 3.5 160.9 1.0
CG A:ASN2875 3.5 122.2 1.0
N3B A:ANP3101 3.6 158.0 1.0
O1G A:ANP3101 3.6 159.0 1.0
O2A A:ANP3101 4.0 157.3 1.0
ND2 A:ASN2875 4.2 120.0 1.0
O3A A:ANP3101 4.3 156.1 1.0
CA A:ASP2889 4.3 139.1 1.0
CE1 A:HIS2872 4.5 129.2 1.0
PB A:ANP3101 4.5 158.8 1.0
NE2 A:HIS2872 4.5 129.0 1.0
O3G A:ANP3101 4.5 162.0 1.0
O5' A:ANP3101 4.6 155.7 1.0
CB A:ASN2875 4.6 121.8 1.0
OD2 A:ASP2870 4.7 138.0 1.0
C2' A:ANP3101 4.7 155.4 1.0
CA A:ASN2875 4.9 123.7 1.0
O1B A:ANP3101 4.9 151.9 1.0
C3' A:ANP3101 4.9 154.5 1.0

Magnesium binding site 2 out of 2 in 8oxo

Go back to Magnesium Binding Sites List in 8oxo
Magnesium binding site 2 out of 2 in the Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atm(Q2971A) Dimeric C-Terminal Region Activated By Oxidative Stress in Complex with Mg Amp-Pnp and P53 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg3102

b:157.8
occ:1.00
O1A B:ANP3101 2.1 159.0 1.0
OD2 B:ASP2889 2.1 152.5 1.0
O1G B:ANP3101 2.4 161.8 1.0
O2G B:ANP3101 2.4 161.9 1.0
OD1 B:ASN2875 2.5 127.1 1.0
CG B:ASP2889 2.5 146.1 1.0
PG B:ANP3101 2.9 173.9 1.0
OD1 B:ASP2889 2.9 145.2 1.0
PA B:ANP3101 3.4 161.6 1.0
CG B:ASN2875 3.5 123.6 1.0
CB B:ASP2889 3.6 142.4 1.0
N3B B:ANP3101 3.8 164.1 1.0
O2A B:ANP3101 4.0 156.0 1.0
ND2 B:ASN2875 4.0 119.6 1.0
O3G B:ANP3101 4.1 164.7 1.0
NE2 B:HIS2872 4.3 129.2 1.0
O3A B:ANP3101 4.3 162.7 1.0
CE1 B:HIS2872 4.3 129.0 1.0
OD2 B:ASP2870 4.4 138.9 1.0
O5' B:ANP3101 4.5 158.6 1.0
CA B:ASP2889 4.6 138.0 1.0
PB B:ANP3101 4.7 170.7 1.0
CB B:ASN2875 4.8 122.9 1.0
C2' B:ANP3101 5.0 159.0 1.0

Reference:

A.C.Howes, O.Perisic, R.L.Williams. Structural Insights Into the Activation of Ataxia-Telangiectasia Mutated By Oxidative Stress To Be Published.
Page generated: Fri Oct 4 15:10:54 2024

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