Magnesium in PDB 8p0g: Thogoto Virus Polymerase in Mode A Conformation and Bound to 35-Mer Loop Promoter Rna

All present enzymatic activity of Thogoto Virus Polymerase in Mode A Conformation and Bound to 35-Mer Loop Promoter Rna:
2.7.7.48;

The binding sites of Magnesium atom in the Thogoto Virus Polymerase in Mode A Conformation and Bound to 35-Mer Loop Promoter Rna (pdb code 8p0g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Thogoto Virus Polymerase in Mode A Conformation and Bound to 35-Mer Loop Promoter Rna, PDB code: 8p0g:

Magnesium binding site 1 out of 1 in the Thogoto Virus Polymerase in Mode A Conformation and Bound to 35-Mer Loop Promoter Rna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Thogoto Virus Polymerase in Mode A Conformation and Bound to 35-Mer Loop Promoter Rna within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg801 b:24.6 occ:1.00 OD1 B:ASP423 2.0 53.8 1.0 CG B:ASP423 2.5 59.4 1.0 OD2 B:ASP423 2.5 62.0 1.0 OD1 B:ASP301 2.8 53.1 1.0 O B:GLY300 3.2 59.0 1.0 C B:GLY300 3.7 38.6 1.0 CB B:ASP423 3.8 53.1 1.0 N B:GLY300 4.0 33.8 1.0 O B:GLU469 4.0 48.4 1.0 CG B:ASP301 4.0 51.3 1.0 CA B:GLY300 4.1 38.9 1.0 O B:PHE424 4.4 50.9 1.0 CA B:ASP423 4.4 42.0 1.0 CG B:GLU469 4.4 47.4 1.0 CA B:PHE470 4.4 38.4 1.0 N B:PHE424 4.4 26.8 1.0 N B:ASP301 4.6 31.2 1.0 OD2 B:ASP301 4.6 54.0 1.0 OE2 B:GLU469 4.6 47.1 1.0 C B:GLU469 4.7 39.1 1.0 C B:SER299 4.8 37.5 1.0 N B:ASN471 4.8 38.6 1.0 N B:PHE470 4.9 41.9 1.0 C B:ASP423 4.9 38.2 1.0

T.Kouba, S.Cusack. Thogoto Virus Polymerase To Be Published.