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Magnesium in PDB 8p50: Photorhabdus Luminescens Makes Caterpillars Floppy (Mcf) Toxin with the C-Terminal Deletion in Complex with ARF3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Photorhabdus Luminescens Makes Caterpillars Floppy (Mcf) Toxin with the C-Terminal Deletion in Complex with ARF3 (pdb code 8p50). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Photorhabdus Luminescens Makes Caterpillars Floppy (Mcf) Toxin with the C-Terminal Deletion in Complex with ARF3, PDB code: 8p50:

Magnesium binding site 1 out of 1 in 8p50

Go back to Magnesium Binding Sites List in 8p50
Magnesium binding site 1 out of 1 in the Photorhabdus Luminescens Makes Caterpillars Floppy (Mcf) Toxin with the C-Terminal Deletion in Complex with ARF3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Photorhabdus Luminescens Makes Caterpillars Floppy (Mcf) Toxin with the C-Terminal Deletion in Complex with ARF3 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1002

b:591.2
occ:0.37
O2B B:GTP1001 1.9 587.3 0.6
O3G B:GTP1001 2.0 587.3 0.8
O1A B:GTP1001 2.1 587.3 0.0
O3B B:GTP1001 2.5 587.3 0.6
PB B:GTP1001 2.5 587.3 0.2
PG B:GTP1001 2.8 587.3 0.6
OG1 B:THR48 2.8 546.5 0.7
PA B:GTP1001 3.0 587.3 0.0
O3A B:GTP1001 3.2 587.3 0.5
CB B:THR48 3.3 546.5 0.9
OG1 B:THR31 3.6 578.4 0.0
O2A B:GTP1001 3.6 587.3 0.1
O1G B:GTP1001 3.8 587.3 0.3
O2G B:GTP1001 3.9 587.3 1.0
O1B B:GTP1001 3.9 587.3 0.3
CG2 B:THR48 4.2 546.5 0.6
N B:THR48 4.3 546.5 0.6
CB B:THR31 4.3 578.4 0.0
CA B:THR48 4.4 546.5 0.8
O5' B:GTP1001 4.4 587.3 0.6
O B:ILE46 4.5 538.8 0.0
C B:PRO47 4.7 534.2 0.6
N B:THR31 4.8 578.4 0.0
C5' B:GTP1001 4.8 587.3 0.9

Reference:

A.Belyy, P.Heilen, P.Hagel, O.Hofnagel, S.Raunser. Structure and Mechanism of Activation of Photorhabdus Luminescens Makes Caterpillars Floppy (Mcf) Toxin To Be Published.
Page generated: Fri Oct 4 15:48:08 2024

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