Magnesium in PDB 8p6y: Cryo-Em Structure of Cak in Complex with Nucleotide Analogue Atpgs

All present enzymatic activity of Cryo-Em Structure of Cak in Complex with Nucleotide Analogue Atpgs:
2.7.11.22; 2.7.11.23;

The binding sites of Magnesium atom in the Cryo-Em Structure of Cak in Complex with Nucleotide Analogue Atpgs (pdb code 8p6y). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Cak in Complex with Nucleotide Analogue Atpgs, PDB code: 8p6y:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Cak in Complex with Nucleotide Analogue Atpgs


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Cak in Complex with Nucleotide Analogue Atpgs within 5.0Å range: probe atom residue distance (Å) B Occ J:Mg402 b:24.0 occ:1.00 O J:HOH551 2.1 22.6 1.0 O2G J:AGS401 2.3 29.9 1.0 OD1 J:ASN142 2.3 13.9 1.0 OD2 J:ASP155 2.8 19.6 1.0 ND2 J:ASN141 2.9 18.5 1.0 CG J:ASN142 3.5 7.5 1.0 CG J:ASP155 3.6 14.0 1.0 PG J:AGS401 3.8 35.9 1.0 O3A J:AGS401 3.9 31.3 1.0 CB J:ASP155 3.9 9.3 1.0 O5' J:AGS401 4.0 33.6 1.0 ND2 J:ASN142 4.0 8.9 1.0 CG J:ASN141 4.1 11.3 1.0 PA J:AGS401 4.3 39.7 1.0 O J:HOH501 4.3 20.1 1.0 S1G J:AGS401 4.4 41.5 1.0 O2A J:AGS401 4.4 30.9 1.0 O J:ASN141 4.4 11.5 1.0 O3' J:AGS401 4.5 29.7 1.0 OD1 J:ASP155 4.6 20.0 1.0 OD1 J:ASN141 4.6 20.1 1.0 O3B J:AGS401 4.7 31.2 1.0 CB J:ASN142 4.7 4.6 1.0 PB J:AGS401 4.7 40.4 1.0 CA J:ASN142 4.8 6.3 1.0 C J:ASN141 4.8 8.0 1.0 O2B J:AGS401 4.8 33.6 1.0 CE J:LYS139 4.9 12.4 1.0 O3G J:AGS401 5.0 32.5 1.0 N J:ASN142 5.0 5.6 1.0

V.I.Cushing, A.F.Koh, J.Feng, K.Jurgaityte, A.K.Bahl, S.Ali, A.Kotecha, B.J.Greber. High-Resolution Cryo-Electron Microscopy of the Human Cdk-Activating Kinase For Structure-Based Drug Design To Be Published.