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Magnesium in PDB 8pey: Rho P167L-Atpgs-Psu Complex II

Magnesium Binding Sites:

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>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Magnesium atom in the Rho P167L-Atpgs-Psu Complex II (pdb code 8pey). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 12 binding sites of Magnesium where determined in the Rho P167L-Atpgs-Psu Complex II, PDB code: 8pey:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 12 in 8pey

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Magnesium binding site 1 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg502

b:109.1
occ:1.00
OG1 B:THR185 2.0 106.3 1.0
O2G B:AGS501 2.1 110.7 1.0
O1B B:AGS501 2.1 120.0 1.0
CG2 B:THR185 2.3 107.7 1.0
CB B:THR185 2.6 103.0 1.0
PB B:AGS501 3.4 128.8 1.0
O2A B:AGS501 3.4 115.0 1.0
PG B:AGS501 3.5 114.7 1.0
N B:THR185 3.6 96.2 1.0
O1A B:AGS501 3.6 124.5 1.0
CA B:THR185 3.7 100.5 1.0
PA B:AGS501 3.9 118.1 1.0
O3B B:AGS501 3.9 116.0 1.0
O3G B:AGS501 4.1 120.8 1.0
O3A B:AGS501 4.1 122.6 1.0
OE1 B:GLU215 4.3 102.4 1.0
OE2 B:GLU215 4.5 108.1 1.0
OE2 B:GLU211 4.5 105.6 1.0
O2B B:AGS501 4.6 126.2 1.0
CD B:GLU215 4.6 104.1 1.0
C B:THR185 4.7 110.0 1.0
N B:MET186 4.8 104.5 1.0
C B:LYS184 4.8 94.5 1.0
S1G B:AGS501 4.9 121.9 1.0
N B:LYS184 4.9 88.3 1.0

Magnesium binding site 2 out of 12 in 8pey

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Magnesium binding site 2 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg502

b:71.2
occ:1.00
OG1 C:THR185 2.1 87.0 1.0
O2G C:AGS501 2.1 88.6 1.0
O1B C:AGS501 2.1 94.3 1.0
PG C:AGS501 3.1 91.2 1.0
OE2 C:GLU215 3.2 96.7 1.0
CB C:THR185 3.3 81.4 1.0
PB C:AGS501 3.3 83.2 1.0
O3G C:AGS501 3.4 92.1 1.0
O3B C:AGS501 3.6 84.0 1.0
OE2 C:GLU211 3.8 100.8 1.0
CG2 C:THR185 3.9 78.3 1.0
NH1 C:ARG212 3.9 83.3 1.0
NH2 C:ARG212 4.2 84.4 1.0
O3A C:AGS501 4.3 89.3 1.0
O2B C:AGS501 4.4 95.4 1.0
CD C:GLU215 4.4 96.7 1.0
O1A C:AGS501 4.4 95.6 1.0
CA C:THR185 4.5 75.4 1.0
CZ C:ARG212 4.5 82.6 1.0
N C:THR185 4.7 74.0 1.0
O2A C:AGS501 4.7 84.3 1.0
PA C:AGS501 4.7 88.7 1.0
S1G C:AGS501 4.9 98.0 1.0
CD C:GLU211 4.9 98.1 1.0

Magnesium binding site 3 out of 12 in 8pey

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Magnesium binding site 3 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg502

b:95.2
occ:1.00
OG1 D:THR185 2.0 91.4 1.0
O2G D:AGS501 2.1 94.0 1.0
O1B D:AGS501 2.1 98.5 1.0
CB D:THR185 3.3 83.3 1.0
OE2 D:GLU211 3.4 104.9 1.0
PG D:AGS501 3.4 90.6 1.0
PB D:AGS501 3.4 90.0 1.0
O3B D:AGS501 3.7 89.7 1.0
OE1 D:GLU215 3.8 101.3 1.0
O1A D:AGS501 4.0 102.2 1.0
O3G D:AGS501 4.1 96.9 1.0
CG2 D:THR185 4.1 84.3 1.0
NH1 D:ARG212 4.2 86.4 1.0
O2B D:AGS501 4.4 96.8 1.0
CA D:THR185 4.4 79.9 1.0
O3A D:AGS501 4.4 92.7 1.0
NH2 D:ARG212 4.4 90.7 1.0
CD D:GLU215 4.5 101.8 1.0
N D:THR185 4.5 80.8 1.0
CD D:GLU211 4.6 105.4 1.0
PA D:AGS501 4.6 98.3 1.0
CZ D:ARG212 4.8 86.4 1.0
CG D:GLU215 4.9 93.3 1.0
S1G D:AGS501 4.9 99.4 1.0
O2A D:AGS501 4.9 86.3 1.0

Magnesium binding site 4 out of 12 in 8pey

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Magnesium binding site 4 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg502

b:87.9
occ:1.00
OG1 E:THR185 2.1 92.8 1.0
O2G E:AGS501 2.1 92.7 1.0
O1B E:AGS501 2.1 97.8 1.0
OE2 E:GLU211 3.3 116.0 1.0
PB E:AGS501 3.4 94.9 1.0
PG E:AGS501 3.5 97.5 1.0
CB E:THR185 3.5 90.2 1.0
O3B E:AGS501 3.8 94.5 1.0
OE2 E:GLU215 3.9 115.9 1.0
CG2 E:THR185 4.1 92.3 1.0
N E:THR185 4.3 90.3 1.0
NH1 E:ARG212 4.4 99.5 1.0
O2B E:AGS501 4.4 100.9 1.0
CA E:THR185 4.4 85.8 1.0
CD E:GLU215 4.4 112.8 1.0
O1A E:AGS501 4.4 99.3 1.0
O3A E:AGS501 4.5 97.4 1.0
O3G E:AGS501 4.5 101.2 1.0
CD E:GLU211 4.5 116.5 1.0
OD2 E:ASP265 4.6 113.2 1.0
S1G E:AGS501 4.7 107.5 1.0
OE1 E:GLU215 4.7 111.9 1.0
PA E:AGS501 4.8 100.8 1.0
O2A E:AGS501 4.9 92.9 1.0
NH2 E:ARG212 4.9 95.2 1.0

Magnesium binding site 5 out of 12 in 8pey

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Magnesium binding site 5 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg502

b:130.4
occ:1.00
OG1 F:THR185 2.1 125.8 1.0
O2G F:AGS501 2.1 127.1 1.0
O1B F:AGS501 2.1 132.1 1.0
PB F:AGS501 3.2 132.4 1.0
PG F:AGS501 3.3 132.7 1.0
CB F:THR185 3.3 121.8 1.0
O3B F:AGS501 3.4 133.7 1.0
N F:THR185 3.6 118.0 1.0
CA F:THR185 3.9 118.3 1.0
O2B F:AGS501 4.0 132.0 1.0
OD2 F:ASP265 4.1 126.7 1.0
CB F:LYS184 4.2 117.4 1.0
CE F:LYS184 4.3 119.8 1.0
S1G F:AGS501 4.4 134.5 1.0
O3G F:AGS501 4.4 132.0 1.0
CG2 F:THR185 4.5 122.0 1.0
O3A F:AGS501 4.5 130.7 1.0
C F:LYS184 4.5 118.7 1.0
O2A F:AGS501 4.7 131.0 1.0
CA F:LYS184 4.8 117.5 1.0
O1A F:AGS501 4.8 133.4 1.0
NZ F:LYS184 4.9 122.6 1.0
PA F:AGS501 4.9 134.6 1.0
N F:LYS184 4.9 118.8 1.0

Magnesium binding site 6 out of 12 in 8pey

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Magnesium binding site 6 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg502

b:184.4
occ:1.00
CG2 G:THR185 2.0 189.0 1.0
O1B G:AGS501 2.1 193.3 1.0
OG1 G:THR185 2.1 189.4 1.0
O2G G:AGS501 2.1 193.8 1.0
CB G:THR185 2.5 189.5 1.0
O2A G:AGS501 2.5 193.3 1.0
N G:THR185 3.1 187.8 1.0
O1A G:AGS501 3.3 193.8 1.0
PA G:AGS501 3.3 194.5 1.0
PB G:AGS501 3.3 195.6 1.0
PG G:AGS501 3.3 195.5 1.0
CA G:THR185 3.4 188.6 1.0
O3G G:AGS501 3.7 194.4 1.0
O3A G:AGS501 3.8 195.8 1.0
O3B G:AGS501 3.8 195.4 1.0
C G:LYS184 4.3 184.1 1.0
N G:LYS184 4.4 185.7 1.0
C G:THR185 4.5 188.5 1.0
O2B G:AGS501 4.6 195.3 1.0
N G:MET186 4.7 185.4 1.0
CA G:LYS184 4.8 185.1 1.0
O5' G:AGS501 4.8 194.5 1.0
CB G:LYS184 4.9 184.8 1.0
CE G:MET186 5.0 184.5 1.0
S1G G:AGS501 5.0 196.0 1.0

Magnesium binding site 7 out of 12 in 8pey

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Magnesium binding site 7 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Mg502

b:114.5
occ:1.00
CG2 I:THR185 1.7 113.2 1.0
O1B I:AGS501 2.1 137.9 1.0
O2G I:AGS501 2.2 138.9 1.0
OG1 I:THR185 2.2 113.0 1.0
CB I:THR185 2.4 113.3 1.0
PG I:AGS501 3.4 141.9 1.0
N I:THR185 3.4 104.6 1.0
PB I:AGS501 3.5 136.7 1.0
CA I:THR185 3.5 109.0 1.0
O3G I:AGS501 3.6 140.2 1.0
O2A I:AGS501 3.8 137.2 1.0
O3B I:AGS501 3.9 137.8 1.0
O1A I:AGS501 4.1 138.3 1.0
PA I:AGS501 4.3 138.0 1.0
OE1 I:GLU215 4.4 94.9 1.0
O2B I:AGS501 4.4 135.0 1.0
O3A I:AGS501 4.5 136.8 1.0
C I:LYS184 4.6 104.5 1.0
C I:THR185 4.7 109.1 1.0
OE1 I:GLU211 4.7 92.8 1.0
NH2 I:ARG212 4.8 87.1 1.0
N I:MET186 5.0 107.0 1.0
S1G I:AGS501 5.0 141.5 1.0

Magnesium binding site 8 out of 12 in 8pey

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Magnesium binding site 8 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg502

b:95.1
occ:1.00
CG2 J:THR185 1.9 88.7 1.0
O1B J:AGS501 2.1 95.5 1.0
OG1 J:THR185 2.1 104.5 1.0
O2G J:AGS501 2.1 85.1 1.0
CB J:THR185 2.4 88.4 1.0
PB J:AGS501 3.5 93.0 1.0
O1A J:AGS501 3.5 102.6 1.0
PG J:AGS501 3.6 92.3 1.0
CA J:THR185 3.6 83.1 1.0
N J:THR185 3.7 81.2 1.0
O2A J:AGS501 3.8 84.3 1.0
OE1 J:GLU215 4.0 106.0 1.0
O3B J:AGS501 4.0 86.2 1.0
PA J:AGS501 4.0 94.5 1.0
O3A J:AGS501 4.3 98.0 1.0
O3G J:AGS501 4.3 97.2 1.0
CD J:GLU215 4.4 104.6 1.0
O2B J:AGS501 4.5 100.5 1.0
C J:THR185 4.7 93.0 1.0
OE2 J:GLU211 4.7 109.3 1.0
OE2 J:GLU215 4.7 110.3 1.0
NH1 J:ARG212 4.9 84.9 1.0
S1G J:AGS501 4.9 107.0 1.0
N J:MET186 5.0 90.9 1.0
C J:LYS184 5.0 90.5 1.0

Magnesium binding site 9 out of 12 in 8pey

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Magnesium binding site 9 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg502

b:77.5
occ:1.00
OG1 K:THR185 2.1 84.2 1.0
O2G K:AGS501 2.1 90.1 1.0
O1B K:AGS501 2.1 92.5 1.0
PG K:AGS501 3.3 87.6 1.0
PB K:AGS501 3.3 87.2 1.0
OE2 K:GLU211 3.4 108.3 1.0
CB K:THR185 3.5 83.2 1.0
O3B K:AGS501 3.6 88.1 1.0
O3G K:AGS501 3.9 91.8 1.0
OE2 K:GLU215 4.0 104.0 1.0
CG2 K:THR185 4.1 85.5 1.0
NH1 K:ARG212 4.2 80.3 1.0
O2B K:AGS501 4.3 89.6 1.0
N K:THR185 4.3 79.9 1.0
CA K:THR185 4.4 78.4 1.0
O3A K:AGS501 4.4 98.8 1.0
O1A K:AGS501 4.4 99.0 1.0
CD K:GLU215 4.5 104.1 1.0
CD K:GLU211 4.5 105.6 1.0
OD1 K:ASP265 4.6 108.0 1.0
PA K:AGS501 4.9 98.8 1.0
S1G K:AGS501 4.9 106.1 1.0
OE1 K:GLU215 4.9 104.1 1.0
OE1 K:GLU211 5.0 106.8 1.0

Magnesium binding site 10 out of 12 in 8pey

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Magnesium binding site 10 out of 12 in the Rho P167L-Atpgs-Psu Complex II


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Rho P167L-Atpgs-Psu Complex II within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg502

b:86.3
occ:1.00
OG1 L:THR185 2.1 94.2 1.0
O2G L:AGS501 2.1 97.4 1.0
O1B L:AGS501 2.1 97.1 1.0
PG L:AGS501 3.2 95.2 1.0
CB L:THR185 3.3 87.6 1.0
PB L:AGS501 3.4 97.7 1.0
OE2 L:GLU215 3.4 104.1 1.0
O3G L:AGS501 3.5 92.9 1.0
O3B L:AGS501 3.7 101.6 1.0
O1A L:AGS501 3.7 103.7 1.0
OE2 L:GLU211 3.8 106.9 1.0
NH2 L:ARG212 4.0 91.5 1.0
CG2 L:THR185 4.1 88.3 1.0
CD L:GLU215 4.1 104.3 1.0
O3A L:AGS501 4.3 98.0 1.0
CA L:THR185 4.4 83.0 1.0
N L:THR185 4.4 84.7 1.0
PA L:AGS501 4.4 100.8 1.0
O2B L:AGS501 4.5 103.2 1.0
O2A L:AGS501 4.7 89.8 1.0
OE1 L:GLU215 4.7 104.8 1.0
CD L:GLU211 4.8 106.7 1.0
CG L:GLU215 4.9 97.3 1.0
S1G L:AGS501 4.9 105.4 1.0
OD2 L:ASP265 5.0 110.3 1.0

Reference:

D.Gjorgjevikj, M.C.Wahl, T.Hilal, B.Loll. Rho P167L-Atpgs-Psu Complex II To Be Published.
Page generated: Fri Oct 4 16:03:04 2024

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