Magnesium in PDB 8q26: HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide

The structure of HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide, PDB code: 8q26 was solved by C.Dian, C.Giglione, T.Meinnel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.47 / 1.90
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	79.22, 177.87, 57.93, 90, 90, 90
R / Rfree (%)	16.1 / 20.6

The structure of HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Magnesium atom in the HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide (pdb code 8q26). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide, PDB code: 8q26:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg503 b:32.4 occ:1.00 O A:HOH774 2.2 34.7 1.0 O A:HOH700 2.6 38.8 1.0 NE1 A:TRP374 2.7 16.2 1.0 O A:HOH900 2.7 30.0 1.0 OE2 A:GLU370 2.8 26.5 1.0 CD A:GLU370 3.5 23.7 1.0 CE2 A:TRP374 3.5 15.0 1.0 CG A:GLU370 3.7 19.3 1.0 CD1 A:TRP374 3.7 15.5 1.0 CZ2 A:TRP374 3.8 14.9 1.0 O A:PRO230 3.9 20.6 1.0 O A:HOH670 4.0 23.9 1.0 CB A:GLU370 4.1 14.1 1.0 CB A:PRO203 4.3 14.8 1.0 OE1 A:GLU370 4.5 19.9 1.0 O A:HOH662 4.7 36.3 1.0 CG A:PRO203 4.7 13.5 1.0 CD2 A:TRP374 4.8 15.1 1.0 O A:HOH603 4.8 20.7 1.0 CB A:ALA231 4.8 18.1 1.0 CG A:TRP374 4.9 13.8 1.0 CA A:ALA231 4.9 22.6 1.0

Magnesium binding site 2 out of 2 in the HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg503 b:33.7 occ:1.00 OE2 B:GLU139 2.8 30.9 1.0 OH B:TYR479 3.0 18.1 1.0 CE1 B:HIS272 3.2 13.1 1.0 CE B:LYS142 3.8 23.8 1.0 CD B:GLU139 3.8 28.0 1.0 NE2 B:HIS272 3.9 13.6 1.0 O B:HOH693 3.9 17.6 1.0 CZ B:TYR479 3.9 18.4 1.0 CE2 B:TYR479 4.0 16.6 1.0 O B:HOH947 4.0 21.7 1.0 CG2 B:THR268 4.0 14.6 1.0 CG B:PRO124 4.2 21.7 1.0 OE1 B:GLU139 4.2 27.1 1.0 O B:HOH652 4.2 23.3 1.0 CD B:PRO124 4.3 19.6 1.0 ND1 B:HIS272 4.3 16.9 1.0 NZ B:LYS142 4.4 25.6 1.0

C.Dian, C.Giglione, T.Meinnel, F.Riviere, F.R.Dutheil, P.Monassa. HSNMT1 in Complex with Both Myrcoa and Gncfskpr Inhibitor Peptide To Be Published.