Magnesium in PDB 8qau: Outer Kinetochore NDC80-DAM1 Alpha/Beta-Tubulin Complex

The binding sites of Magnesium atom in the Outer Kinetochore NDC80-DAM1 Alpha/Beta-Tubulin Complex (pdb code 8qau). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Outer Kinetochore NDC80-DAM1 Alpha/Beta-Tubulin Complex, PDB code: 8qau:

Magnesium binding site 1 out of 1 in the Outer Kinetochore NDC80-DAM1 Alpha/Beta-Tubulin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Outer Kinetochore NDC80-DAM1 Alpha/Beta-Tubulin Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg502 b:4.0 occ:1.00 OD2 C:ASP98 2.0 20.0 1.0 O1G C:GTP501 2.1 4.0 1.0 O3G C:GTP501 2.2 4.0 1.0 PG C:GTP501 2.6 4.0 1.0 CG C:ASP98 2.9 20.0 1.0 OD1 C:ASP98 3.2 20.0 1.0 O2G C:GTP501 3.6 4.0 1.0 OE2 C:GLU71 3.7 6.8 1.0 OE1 C:GLN11 3.7 4.2 1.0 O3B C:GTP501 3.8 4.0 1.0 O3A C:GTP501 3.9 4.0 1.0 O1B C:GTP501 4.0 4.0 1.0 CD C:GLU71 4.1 6.8 1.0 PB C:GTP501 4.2 4.0 1.0 CB C:GLN11 4.2 4.2 1.0 CB C:ASP98 4.2 20.0 1.0 OG1 C:THR145 4.4 4.0 1.0 CD C:GLN11 4.5 4.2 1.0 CG C:GLU71 4.7 6.8 1.0 OE1 C:GLU71 4.7 6.8 1.0 CG C:GLN11 4.7 4.2 1.0 O1A C:GTP501 4.7 4.0 1.0 NZ D:LYS252 4.7 8.8 1.0 PA C:GTP501 4.8 4.0 1.0 O D:ASN247 4.8 4.0 1.0 OD1 C:ASP69 4.8 8.4 1.0 OD2 C:ASP69 4.9 8.4 1.0 O2A C:GTP501 4.9 4.0 1.0

K.W.Muir, C.Batters, T.Dendooven, J.Yang, Z.Zhang, A.Burt, D.Barford. Mechanism of Outer Kinetochore Assembly on Microtubules and Its Regulation By Mitotic Error Correction Biorxiv 2023.
ISSN: ISSN 2692-8205
DOI: 10.1101/2023.07.20.549907