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Magnesium in PDB 8rbg: Cryoem Structure of Primed Myosin-5A (Adp-Pi State)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryoem Structure of Primed Myosin-5A (Adp-Pi State) (pdb code 8rbg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryoem Structure of Primed Myosin-5A (Adp-Pi State), PDB code: 8rbg:

Magnesium binding site 1 out of 1 in 8rbg

Go back to Magnesium Binding Sites List in 8rbg
Magnesium binding site 1 out of 1 in the Cryoem Structure of Primed Myosin-5A (Adp-Pi State)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryoem Structure of Primed Myosin-5A (Adp-Pi State) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg902

b:81.0
occ:1.00
O1 A:PO4901 1.8 265.2 1.0
O1B A:ADP903 2.1 90.2 1.0
OG1 A:THR170 2.2 118.7 1.0
OG A:SER218 2.3 112.4 1.0
PB A:ADP903 2.6 90.2 1.0
O3B A:ADP903 2.6 90.2 1.0
O3A A:ADP903 2.8 90.2 1.0
NZ A:LYS169 3.2 166.1 1.0
P A:PO4901 3.2 264.8 1.0
CB A:THR170 3.5 118.7 1.0
CB A:SER218 3.6 112.4 1.0
O3 A:PO4901 3.7 267.4 1.0
ND2 A:ASN214 3.7 67.5 1.0
O2 A:PO4901 4.0 265.7 1.0
O4 A:PO4901 4.1 261.7 1.0
O2B A:ADP903 4.1 90.2 1.0
PA A:ADP903 4.2 90.2 1.0
N A:SER218 4.3 112.4 1.0
N A:THR170 4.3 118.7 1.0
CG2 A:THR170 4.3 118.7 1.0
O A:ASN216 4.4 142.7 1.0
CE A:LYS169 4.5 166.1 1.0
O2A A:ADP903 4.5 90.2 1.0
CA A:THR170 4.5 118.7 1.0
CA A:SER218 4.6 112.4 1.0
CG A:LYS169 4.8 166.1 1.0
O1A A:ADP903 4.8 90.2 1.0
CD A:LYS169 4.9 166.1 1.0

Reference:

D.P.Klebl, S.N.Mcmillan, C.Risi, E.Forgacs, B.Virok, J.L.Atherton, M.Stofella, D.A.Winkelmann, F.Sobott, V.E.Galkin, P.J.Knight, S.P.Muench, C.A.Scarff, H.D.White. Swinging Lever Mechanism of Myosin Directly Demonstrated By Time-Resolved Cryoem To Be Published.
Page generated: Sun Dec 15 11:16:39 2024

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