Atomistry » Magnesium » PDB 8rkd-8ru2 » 8rol
Atomistry »
  Magnesium »
    PDB 8rkd-8ru2 »
      8rol »

Magnesium in PDB 8rol: Human Cohesin SMC3-Hd(Eq)/RAD21-C Complex - Atp-Mg-Bound Conformation - Form 2

Protein crystallography data

The structure of Human Cohesin SMC3-Hd(Eq)/RAD21-C Complex - Atp-Mg-Bound Conformation - Form 2, PDB code: 8rol was solved by M.Vitoria Gomes, C.Romier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.64 / 3.11
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 201.067, 201.067, 92.376, 90, 90, 120
R / Rfree (%) 18.7 / 23.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human Cohesin SMC3-Hd(Eq)/RAD21-C Complex - Atp-Mg-Bound Conformation - Form 2 (pdb code 8rol). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human Cohesin SMC3-Hd(Eq)/RAD21-C Complex - Atp-Mg-Bound Conformation - Form 2, PDB code: 8rol:

Magnesium binding site 1 out of 1 in 8rol

Go back to Magnesium Binding Sites List in 8rol
Magnesium binding site 1 out of 1 in the Human Cohesin SMC3-Hd(Eq)/RAD21-C Complex - Atp-Mg-Bound Conformation - Form 2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Cohesin SMC3-Hd(Eq)/RAD21-C Complex - Atp-Mg-Bound Conformation - Form 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2000

b:79.3
occ:1.00
O2G A:AGS2001 2.1 91.9 1.0
OG A:SER39 2.3 82.5 1.0
O2B A:AGS2001 2.6 87.5 1.0
CB A:SER39 3.0 86.2 1.0
O2A A:AGS2001 3.3 68.7 1.0
PG A:AGS2001 3.6 90.2 1.0
PB A:AGS2001 3.9 98.3 1.0
O3B A:AGS2001 4.0 86.0 1.0
O3G A:AGS2001 4.3 115.2 1.0
CA A:SER39 4.5 88.2 1.0
PA A:AGS2001 4.5 78.9 1.0
OD2 A:ASP1143 4.7 89.6 1.0
O3A A:AGS2001 4.7 80.1 1.0
N A:SER39 4.7 102.6 1.0
O1B A:AGS2001 5.0 87.2 1.0

Reference:

M.Vitoria Gomes, C.Romier. The Cohesin Atpase Cycle Is Mediated By Specific Conformational Dynamics and Interface Plasticity of SMC1A and SMC3 Atpase Domains To Be Published.
Page generated: Fri Aug 15 14:05:58 2025

Last articles

Mg in 9F37
Mg in 9EZL
Mg in 9F28
Mg in 9F2R
Mg in 9F12
Mg in 9F11
Mg in 9F10
Mg in 9F0Z
Mg in 9F0Y
Mg in 9F07
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy