Magnesium in PDB 8rtt: Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin.

The binding sites of Magnesium atom in the Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin. (pdb code 8rtt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin., PDB code: 8rtt:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:26.1 occ:1.00 O2 A:PO4403 2.0 27.4 1.0 O1B A:ADP401 2.0 33.2 1.0 PB A:ADP401 3.0 33.2 1.0 O2B A:ADP401 3.2 33.2 1.0 P A:PO4403 3.4 27.4 1.0 O1A A:ADP401 3.9 33.2 1.0 O3B A:ADP401 3.9 33.2 1.0 O1 A:PO4403 3.9 27.4 1.0 O4 A:PO4403 4.1 27.4 1.0 OD2 A:ASP154 4.1 23.7 1.0 NE2 A:GLN137 4.2 30.5 1.0 CA A:GLY156 4.2 22.9 1.0 O3A A:ADP401 4.3 33.2 1.0 OE1 A:GLN137 4.4 30.5 1.0 OD1 A:ASP154 4.5 23.7 1.0 O3 A:PO4403 4.5 27.4 1.0 CD A:GLN137 4.5 30.5 1.0 CG A:ASP154 4.7 23.7 1.0 CG2 A:VAL339 4.8 28.9 1.0 PA A:ADP401 4.8 33.2 1.0 N A:GLY156 4.9 22.9 1.0 NZ A:LYS18 5.0 33.2 1.0

Magnesium binding site 2 out of 4 in the Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:28.2 occ:1.00 O2 B:PO4403 2.7 35.5 1.0 O1B B:ADP401 2.7 44.3 1.0 O2B B:ADP401 3.5 44.3 1.0 OD1 B:ASP154 3.5 22.1 1.0 PB B:ADP401 3.6 44.3 1.0 OE1 B:GLN137 3.7 26.1 1.0 P B:PO4403 4.0 35.5 1.0 O1 B:PO4403 4.2 35.5 1.0 CD B:GLN137 4.2 26.1 1.0 CG2 B:VAL339 4.3 22.8 1.0 CA B:GLY156 4.3 24.5 1.0 O1A B:ADP401 4.4 44.3 1.0 NE2 B:GLN137 4.4 26.1 1.0 O3B B:ADP401 4.4 44.3 1.0 CG B:ASP154 4.7 22.1 1.0 NZ B:LYS18 4.7 27.5 1.0 O3A B:ADP401 4.9 44.3 1.0 N B:GLY156 5.0 24.5 1.0 O4 B:PO4403 5.0 35.5 1.0 OD2 B:ASP11 5.0 27.4 1.0 CB B:VAL339 5.0 22.8 1.0

Magnesium binding site 3 out of 4 in the Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:25.5 occ:1.00 O1B C:ADP401 2.0 19.1 1.0 O2 C:PO4403 2.4 34.5 1.0 PB C:ADP401 3.2 19.1 1.0 O1A C:ADP401 3.4 19.1 1.0 O4 C:PO4403 3.4 34.5 1.0 P C:PO4403 3.4 34.5 1.0 O3B C:ADP401 3.5 19.1 1.0 OE1 C:GLN137 4.0 25.4 1.0 O1 C:PO4403 4.2 34.5 1.0 O3A C:ADP401 4.2 19.1 1.0 NE2 C:GLN137 4.2 25.4 1.0 O2B C:ADP401 4.3 19.1 1.0 CD C:GLN137 4.3 25.4 1.0 PA C:ADP401 4.4 19.1 1.0 NZ C:LYS18 4.5 20.8 1.0 OD2 C:ASP154 4.6 25.7 1.0 O3 C:PO4403 4.7 34.5 1.0 CG2 C:VAL339 4.8 25.0 1.0 CA C:GLY156 4.8 23.8 1.0 CA C:GLY13 4.9 27.0 1.0 OD2 C:ASP11 5.0 26.1 1.0

Magnesium binding site 4 out of 4 in the Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of the Formin CDC12 Bound to the Barbed End of Phalloidin- Stabilized F-Actin. within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg402 b:31.9 occ:1.00 O1B D:ADP401 2.1 33.5 1.0 OE1 D:GLN137 2.7 36.0 1.0 OD1 D:ASP154 3.2 34.0 1.0 PB D:ADP401 3.3 33.5 1.0 O3B D:ADP401 3.7 33.5 1.0 CD D:GLN137 3.8 36.0 1.0 OD2 D:ASP154 3.8 34.0 1.0 CG D:ASP154 3.9 34.0 1.0 O2B D:ADP401 4.2 33.5 1.0 O D:SER155 4.3 32.0 1.0 CG2 D:VAL339 4.4 30.3 1.0 NE2 D:GLN137 4.4 36.0 1.0 O3A D:ADP401 4.4 33.5 1.0 CB D:GLN137 4.7 36.0 1.0 CG D:GLN137 4.8 36.0 1.0 O1A D:ADP401 4.8 33.5 1.0 C D:SER155 4.9 32.0 1.0

W.Oosterheert, M.Boiero Sanders, J.Funk, D.Prumbaum, S.Raunser, P.Bieling. Mechanism of Formin-Mediated Processive Elongation of Actin Filaments Revealed By Cryo-Em To Be Published.